Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2112

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
1,000,558	+		GFF2111	0.51	-0.1
1,000,558	+		GFF2111	0.51	+1.2
1,000,558	+		GFF2111	0.51	+0.9
1,000,559	-		GFF2111	0.51	-0.4
1,000,559	-		GFF2111	0.51	-0.3
1,000,559	-		GFF2111	0.51	+0.1
1,000,559	-		GFF2111	0.51	-0.1
1,001,063	+		GFF2112	0.13	-0.4
1,001,063	+		GFF2112	0.13	-0.1
1,001,063	+		GFF2112	0.13	+0.8
1,001,977	+		GFF2113	0.27	+0.5
1,002,625	+				-1.4