Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1557

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
412,041	+		GFF1556	0.45	+0.6
412,814	+				-0.2
412,814	+				-1.3
412,854	+				+0.6
412,854	+				+0.2
413,172	+		GFF1557	0.30	+1.5
413,208	+		GFF1557	0.34	+0.2
413,208	+		GFF1557	0.34	+0.3
413,253	+		GFF1557	0.38	-0.3
413,254	-		GFF1557	0.39	-0.4
413,254	-		GFF1557	0.39	+0.4
413,300	+		GFF1557	0.43	-0.5
413,347	-		GFF1557	0.48	+0.1
413,808	+				+0.0
414,245	-		GFF1558	0.66	-0.3