Strain Fitness in Escherichia fergusonii Becca around EFB2_04795

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
5,043,328	+				+0.6
5,043,328	+				+0.5
5,043,329	-				+0.4
5,043,329	-				-1.7
5,043,329	-				+0.9
5,043,359	+				+0.1
5,043,359	+				-0.0
5,043,360	-				+0.1
5,043,360	-				+1.2
5,043,366	+				+0.4
5,043,367	-				+0.4
5,043,422	+				+1.0
5,043,422	+				-0.3
5,043,422	+				+0.7
5,043,423	-				-1.3
5,043,423	-				+0.2
5,043,423	-				-1.4
5,043,423	-				-0.6
5,043,432	+				-0.7
5,043,432	+				-0.1
5,043,433	-				+1.5
5,043,441	+		EFB2_04794	0.10	+0.1
5,043,441	+		EFB2_04794	0.10	-1.0
5,043,441	+		EFB2_04794	0.10	+0.6
5,043,442	-		EFB2_04794	0.10	-0.6
5,043,442	-		EFB2_04794	0.10	+0.3
5,043,442	-		EFB2_04794	0.10	-0.1
5,043,442	-		EFB2_04794	0.10	-0.5
5,043,442	-		EFB2_04794	0.10	+1.0
5,043,452	+		EFB2_04794	0.11	-0.1
5,043,453	-		EFB2_04794	0.11	-0.3
5,043,453	-		EFB2_04794	0.11	-1.1
5,043,460	+		EFB2_04794	0.12	-0.5
5,043,460	+		EFB2_04794	0.12	+0.1
5,043,461	-		EFB2_04794	0.12	+0.3
5,043,461	-		EFB2_04794	0.12	+0.7
5,043,505	+		EFB2_04794	0.17	-2.1
5,043,505	+		EFB2_04794	0.17	+0.0
5,043,505	+		EFB2_04794	0.17	+1.0
5,043,505	+		EFB2_04794	0.17	-1.1
5,043,506	-		EFB2_04794	0.18	+2.1
5,043,506	-		EFB2_04794	0.18	+0.5
5,043,506	-		EFB2_04794	0.18	+1.3
5,043,506	-		EFB2_04794	0.18	+1.1
5,043,506	-		EFB2_04794	0.18	+0.2
5,043,506	-		EFB2_04794	0.18	+0.1
5,043,506	-		EFB2_04794	0.18	-0.6
5,043,539	+		EFB2_04794	0.21	-0.6
5,043,540	-		EFB2_04794	0.21	+0.0
5,043,594	-		EFB2_04794	0.28	+1.7
5,043,605	+		EFB2_04794	0.29	-0.5
5,043,606	-		EFB2_04794	0.29	+1.8
5,043,606	-		EFB2_04794	0.29	+0.0
5,043,606	-		EFB2_04794	0.29	-2.6
5,043,606	-		EFB2_04794	0.29	-0.6
5,043,744	-		EFB2_04794	0.45	-0.0
5,043,744	-		EFB2_04794	0.45	-0.3
5,043,744	-		EFB2_04794	0.45	+1.1
5,043,759	+		EFB2_04794	0.47	+0.0
5,043,759	+		EFB2_04794	0.47	+0.2
5,043,759	+		EFB2_04794	0.47	+0.9
5,043,759	+		EFB2_04794	0.47	+0.4
5,043,759	+		EFB2_04794	0.47	-0.0
5,043,759	+		EFB2_04794	0.47	+1.0
5,043,759	+		EFB2_04794	0.47	-1.7
5,043,759	+		EFB2_04794	0.47	+2.0
5,043,759	+		EFB2_04794	0.47	+0.7
5,043,760	-		EFB2_04794	0.47	-2.6
5,043,760	-		EFB2_04794	0.47	+1.4
5,043,760	-		EFB2_04794	0.47	+1.0
5,043,760	-		EFB2_04794	0.47	+0.9
5,043,760	-		EFB2_04794	0.47	-0.0
5,043,760	-		EFB2_04794	0.47	-0.5
5,043,760	-		EFB2_04794	0.47	-0.3
5,043,760	-		EFB2_04794	0.47	+0.0
5,043,760	-		EFB2_04794	0.47	+1.1
5,043,810	-		EFB2_04794	0.53	-0.2
5,043,817	-		EFB2_04794	0.54	+0.0
5,043,871	-		EFB2_04794	0.60	-0.3
5,043,878	+		EFB2_04794	0.61	+0.9
5,043,878	+		EFB2_04794	0.61	+0.2
5,043,879	-		EFB2_04794	0.61	+0.3
5,043,879	-		EFB2_04794	0.61	+0.1
5,043,879	-		EFB2_04794	0.61	+1.2
5,043,898	+		EFB2_04794	0.63	-0.2
5,043,898	+		EFB2_04794	0.63	+0.9
5,043,898	+		EFB2_04794	0.63	-0.4
5,043,898	+		EFB2_04794	0.63	-0.2
5,043,898	+		EFB2_04794	0.63	-1.1
5,043,898	+		EFB2_04794	0.63	-2.0
5,043,899	-		EFB2_04794	0.63	+0.8
5,043,899	-		EFB2_04794	0.63	-1.8
5,043,899	-		EFB2_04794	0.63	-0.7
5,043,899	-		EFB2_04794	0.63	-0.8
5,043,899	-		EFB2_04794	0.63	+0.1
5,043,899	-		EFB2_04794	0.63	+0.3
5,043,899	-		EFB2_04794	0.63	-0.1
5,043,899	-		EFB2_04794	0.63	+0.5
5,043,899	-		EFB2_04794	0.63	-0.6
5,043,899	-		EFB2_04794	0.63	+0.1
5,043,899	-		EFB2_04794	0.63	-0.3
5,043,899	-		EFB2_04794	0.63	-0.5
5,043,910	+		EFB2_04794	0.64	+0.4
5,043,964	+		EFB2_04794	0.71	-3.5
5,044,024	+		EFB2_04794	0.78	+1.1
5,044,024	+		EFB2_04794	0.78	+1.3
5,044,025	-		EFB2_04794	0.78	+0.5
5,044,073	+		EFB2_04794	0.83	-1.1
5,044,073	+		EFB2_04794	0.83	-0.8
5,044,074	-		EFB2_04794	0.84	+1.0
5,044,074	-		EFB2_04794	0.84	+0.7
5,044,160	+				-0.1
5,044,160	+				-1.8
5,044,160	+				+0.3
5,044,160	+				-0.5
5,044,160	+				-1.1
5,044,161	-				+0.6
5,044,161	-				+0.8
5,044,161	-				-1.4
5,044,161	-				-0.9
5,044,161	-				+0.9
5,044,161	-				-0.9
5,044,161	-				+0.5
5,044,161	-				-0.7
5,044,161	-				+1.4
5,044,161	-				-0.6
5,044,243	+				+0.3
5,044,251	+				-3.0
5,044,251	+				-0.0
5,044,252	-				-0.2
5,044,303	+				+0.6
5,044,318	+				+0.2
5,044,322	+				+0.9
5,044,324	+				+1.2
5,044,436	-				-0.1
5,044,497	+		EFB2_04795	0.12	+0.2
5,044,497	+		EFB2_04795	0.12	+0.3
5,044,497	+		EFB2_04795	0.12	+0.2
5,044,497	+		EFB2_04795	0.12	+0.3
5,044,497	+		EFB2_04795	0.12	-0.2
5,044,497	+		EFB2_04795	0.12	+0.5
5,044,498	-		EFB2_04795	0.12	+0.6
5,044,498	-		EFB2_04795	0.12	+0.2
5,044,498	-		EFB2_04795	0.12	-0.4
5,044,498	-		EFB2_04795	0.12	+1.4
5,044,498	-		EFB2_04795	0.12	+0.3
5,044,525	+		EFB2_04795	0.14	-0.1
5,044,525	+		EFB2_04795	0.14	-0.9
5,044,525	+		EFB2_04795	0.14	-0.1
5,044,525	+		EFB2_04795	0.14	+0.6
5,044,525	+		EFB2_04795	0.14	-0.1
5,044,525	+		EFB2_04795	0.14	-0.3
5,044,525	+		EFB2_04795	0.14	-0.4
5,044,525	+		EFB2_04795	0.14	-0.6
5,044,525	+		EFB2_04795	0.14	+0.7
5,044,525	+		EFB2_04795	0.14	-2.1
5,044,525	+		EFB2_04795	0.14	+0.1
5,044,526	-		EFB2_04795	0.14	+0.5
5,044,526	-		EFB2_04795	0.14	+0.4
5,044,526	-		EFB2_04795	0.14	+0.3
5,044,526	-		EFB2_04795	0.14	-0.1
5,044,526	-		EFB2_04795	0.14	-0.0
5,044,526	-		EFB2_04795	0.14	+0.4
5,044,526	-		EFB2_04795	0.14	-0.1
5,044,526	-		EFB2_04795	0.14	-0.4
5,044,591	+		EFB2_04795	0.18	+1.7
5,044,592	-		EFB2_04795	0.18	+0.2
5,044,600	+		EFB2_04795	0.19	+0.8
5,044,601	-		EFB2_04795	0.19	+0.9
5,044,601	-		EFB2_04795	0.19	+0.7
5,044,685	+		EFB2_04795	0.24	+3.5
5,044,705	+		EFB2_04795	0.25	+0.2
5,044,705	+		EFB2_04795	0.25	+0.8
5,044,705	+		EFB2_04795	0.25	-1.2
5,044,705	+		EFB2_04795	0.25	+0.2
5,044,705	+		EFB2_04795	0.25	+0.3
5,044,705	+		EFB2_04795	0.25	+0.1
5,044,706	-		EFB2_04795	0.25	+0.4
5,044,706	-		EFB2_04795	0.25	+0.0
5,044,706	-		EFB2_04795	0.25	-0.3
5,044,714	-		EFB2_04795	0.26	+1.9
5,044,774	+		EFB2_04795	0.30	-0.5
5,044,809	+		EFB2_04795	0.32	-1.3
5,044,809	+		EFB2_04795	0.32	-0.6
5,044,864	+		EFB2_04795	0.36	+0.6
5,044,865	-		EFB2_04795	0.36	-2.2
5,044,894	+		EFB2_04795	0.37	-0.7
5,044,895	-		EFB2_04795	0.38	-0.4
5,044,895	-		EFB2_04795	0.38	-0.1
5,044,895	-		EFB2_04795	0.38	-1.4
5,044,895	-		EFB2_04795	0.38	+0.5
5,044,917	+		EFB2_04795	0.39	-2.3
5,044,917	+		EFB2_04795	0.39	-0.9
5,044,917	+		EFB2_04795	0.39	+0.9
5,044,957	+		EFB2_04795	0.41	+0.2
5,045,013	+		EFB2_04795	0.45	+1.5
5,045,031	+		EFB2_04795	0.46	-2.5
5,045,031	+		EFB2_04795	0.46	+1.0
5,045,032	-		EFB2_04795	0.46	-1.2
5,045,032	-		EFB2_04795	0.46	-0.5
5,045,064	+		EFB2_04795	0.48	-0.1
5,045,064	+		EFB2_04795	0.48	-0.3
5,045,064	+		EFB2_04795	0.48	+0.2
5,045,065	-		EFB2_04795	0.48	-0.1
5,045,110	+		EFB2_04795	0.51	+0.4
5,045,110	+		EFB2_04795	0.51	+0.3
5,045,110	+		EFB2_04795	0.51	+0.5
5,045,111	-		EFB2_04795	0.51	+0.3
5,045,111	-		EFB2_04795	0.51	+0.7
5,045,111	-		EFB2_04795	0.51	+0.2
5,045,194	+		EFB2_04795	0.57	+0.7
5,045,194	+		EFB2_04795	0.57	+1.5
5,045,195	-		EFB2_04795	0.57	-2.3
5,045,307	+		EFB2_04795	0.64	-0.0
5,045,307	+		EFB2_04795	0.64	+0.4
5,045,307	+		EFB2_04795	0.64	-0.1
5,045,308	-		EFB2_04795	0.64	+0.1
5,045,308	-		EFB2_04795	0.64	+0.2
5,045,308	-		EFB2_04795	0.64	+0.6
5,045,381	+		EFB2_04795	0.69	+0.6
5,045,381	+		EFB2_04795	0.69	-0.7
5,045,395	+		EFB2_04795	0.70	-1.2
5,045,395	+		EFB2_04795	0.70	+0.6
5,045,395	+		EFB2_04795	0.70	-0.9
5,045,395	+		EFB2_04795	0.70	-3.4
5,045,395	+		EFB2_04795	0.70	+2.4
5,045,395	+		EFB2_04795	0.70	-0.2
5,045,395	+		EFB2_04795	0.70	+0.0
5,045,395	+		EFB2_04795	0.70	+0.6
5,045,396	-		EFB2_04795	0.70	+0.6
5,045,396	-		EFB2_04795	0.70	+0.8
5,045,396	-		EFB2_04795	0.70	+0.1
5,045,396	-		EFB2_04795	0.70	+0.6
5,045,396	-		EFB2_04795	0.70	+0.6
5,045,396	-		EFB2_04795	0.70	-0.7
5,045,396	-		EFB2_04795	0.70	-0.0
5,045,396	-		EFB2_04795	0.70	-0.7
5,045,396	-		EFB2_04795	0.70	+0.2
5,045,396	-		EFB2_04795	0.70	+0.8
5,045,396	-		EFB2_04795	0.70	+1.6
5,045,396	-		EFB2_04795	0.70	+0.1
5,045,396	-		EFB2_04795	0.70	-0.5
5,045,432	-		EFB2_04795	0.72	+0.4
5,045,447	-		EFB2_04795	0.73	-0.4
5,045,464	+		EFB2_04795	0.74	-0.4
5,045,464	+		EFB2_04795	0.74	+0.9
5,045,464	+		EFB2_04795	0.74	-0.0
5,045,464	+		EFB2_04795	0.74	-2.4
5,045,465	-		EFB2_04795	0.74	+0.7
5,045,465	-		EFB2_04795	0.74	-0.9
5,045,465	-		EFB2_04795	0.74	-0.7
5,045,465	-		EFB2_04795	0.74	+0.0
5,045,465	-		EFB2_04795	0.74	+0.4
5,045,607	+		EFB2_04795	0.83	-1.0
5,045,619	+		EFB2_04795	0.84	-0.7
5,045,619	+		EFB2_04795	0.84	+0.3
5,045,619	+		EFB2_04795	0.84	-0.1
5,045,619	+		EFB2_04795	0.84	-0.1
5,045,619	+		EFB2_04795	0.84	+0.1
5,045,619	+		EFB2_04795	0.84	-1.7
5,045,619	+		EFB2_04795	0.84	+0.9
5,045,619	+		EFB2_04795	0.84	+0.8
5,045,619	+		EFB2_04795	0.84	+1.3
5,045,620	-		EFB2_04795	0.84	+0.9
5,045,620	-		EFB2_04795	0.84	+0.3
5,045,620	-		EFB2_04795	0.84	-0.3
5,045,620	-		EFB2_04795	0.84	-0.5
5,045,620	-		EFB2_04795	0.84	+0.3
5,045,620	-		EFB2_04795	0.84	-1.2
5,045,620	-		EFB2_04795	0.84	+0.6
5,045,628	-		EFB2_04795	0.84	-0.5
5,045,658	+		EFB2_04795	0.86	-2.1
5,045,659	-		EFB2_04795	0.86	+0.1
5,045,689	+		EFB2_04795	0.88	-0.0
5,045,689	+		EFB2_04795	0.88	-0.5
5,045,689	+		EFB2_04795	0.88	-0.2
5,045,690	-		EFB2_04795	0.88	-1.0
5,045,690	-		EFB2_04795	0.88	+0.4
5,045,690	-		EFB2_04795	0.88	-0.5
5,045,742	+				-0.1
5,045,742	+				-1.7
5,045,742	+				-1.2
5,045,742	+				-1.2
5,045,742	+				+3.2
5,045,743	-				-0.3
5,045,743	-				+0.1
5,045,743	-				+0.4
5,045,743	-				+0.1
5,045,757	+				-0.0
5,045,757	+				+0.1
5,045,757	+				+0.7
5,045,757	+				-3.0
5,045,757	+				+0.4
5,045,758	-				+2.2
5,045,758	-				-0.5
5,045,758	-				-1.3
5,045,766	+				+0.6
5,045,766	+				-0.0
5,045,766	+				-1.3
5,045,767	-				-1.2
5,045,871	+				+0.5
5,045,871	+				+0.8
5,045,872	-				+0.0
5,045,872	-				-0.1
5,045,876	+				-1.5
5,045,876	+				-0.4
5,045,876	+				+0.4
5,045,877	-				+1.1
5,045,877	-				+0.4
5,045,912	+				-0.8
5,045,913	-				+0.5
5,045,932	-				-2.7
5,045,932	-				+0.1
5,046,023	+		EFB2_04796	0.14	+0.5
5,046,023	+		EFB2_04796	0.14	+0.8
5,046,023	+		EFB2_04796	0.14	-0.8
5,046,023	+		EFB2_04796	0.14	+0.4
5,046,023	+		EFB2_04796	0.14	+2.0
5,046,023	+		EFB2_04796	0.14	-0.1
5,046,023	+		EFB2_04796	0.14	-0.5
5,046,023	+		EFB2_04796	0.14	-0.4
5,046,024	-		EFB2_04796	0.14	-0.3
5,046,024	-		EFB2_04796	0.14	-0.5
5,046,024	-		EFB2_04796	0.14	+0.9
5,046,024	-		EFB2_04796	0.14	-0.9
5,046,024	-		EFB2_04796	0.14	+0.2
5,046,024	-		EFB2_04796	0.14	-0.2
5,046,024	-		EFB2_04796	0.14	+0.5
5,046,024	-		EFB2_04796	0.14	+0.5
5,046,024	-		EFB2_04796	0.14	+0.5
5,046,024	-		EFB2_04796	0.14	-1.1
5,046,024	-		EFB2_04796	0.14	-0.3
5,046,070	+		EFB2_04796	0.17	-0.9
5,046,071	-		EFB2_04796	0.17	-1.7
5,046,095	+		EFB2_04796	0.19	+0.0
5,046,095	+		EFB2_04796	0.19	+0.2
5,046,095	+		EFB2_04796	0.19	+0.4
5,046,095	+		EFB2_04796	0.19	+0.8
5,046,095	+		EFB2_04796	0.19	+1.2
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