Strain Fitness in Escherichia fergusonii Becca around EFB2_02604

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
2,753,862	+		EFB2_02602	0.73	-0.2
2,753,862	+		EFB2_02602	0.73	+0.6
2,753,862	+		EFB2_02602	0.73	+1.2
2,753,862	+		EFB2_02602	0.73	-2.6
2,753,863	-		EFB2_02602	0.73	-1.0
2,753,863	-		EFB2_02602	0.73	-0.4
2,753,863	-		EFB2_02602	0.73	-0.0
2,753,920	+		EFB2_02602	0.79	+1.2
2,753,920	+		EFB2_02602	0.79	-1.5
2,753,921	-		EFB2_02602	0.79	+0.6
2,753,921	-		EFB2_02602	0.79	+0.6
2,753,941	-		EFB2_02602	0.81	-1.1
2,753,941	-		EFB2_02602	0.81	-2.3
2,753,941	-		EFB2_02602	0.81	-1.1
2,753,941	-		EFB2_02602	0.81	+1.4
2,753,984	+		EFB2_02602	0.85	+0.2
2,753,985	-		EFB2_02602	0.85	-0.4
2,754,010	-		EFB2_02602	0.88	-1.3
2,754,010	-		EFB2_02602	0.88	-1.5
2,754,010	-		EFB2_02602	0.88	+0.8
2,754,084	+				-1.4
2,754,085	-				-2.7
2,754,085	-				-0.6
2,754,085	-				-2.5
2,754,085	-				+0.3
2,754,085	-				-0.8
2,754,088	+				+0.7
2,754,088	+				+1.3
2,754,088	+				+0.1
2,754,088	+				-1.4
2,754,088	+				-1.6
2,754,088	+				-0.1
2,754,088	+				+0.1
2,754,088	+				+1.0
2,754,088	+				+0.6
2,754,088	+				+1.9
2,754,088	+				-2.3
2,754,088	+				-0.6
2,754,088	+				+1.7
2,754,089	-				+0.2
2,754,089	-				-0.7
2,754,089	-				+0.4
2,754,089	-				-0.8
2,754,089	-				-1.4
2,754,089	-				+1.2
2,754,089	-				+0.2
2,754,089	-				+0.3
2,754,089	-				-1.8
2,754,089	-				+1.4
2,754,089	-				-2.8
2,754,089	-				+0.2
2,754,089	-				+0.3
2,754,109	+				-0.2
2,754,109	+				-1.7
2,754,109	+				-2.3
2,754,110	-				-0.3
2,754,110	-				-1.6
2,754,110	-				-0.2
2,754,110	-				-1.3
2,754,110	-				-0.3
2,754,110	-				+0.4
2,754,110	-				-0.1
2,754,110	-				+1.7
2,754,130	+				+0.0
2,754,130	+				+0.4
2,754,161	-				-1.1
2,754,170	+				-0.3
2,754,170	+				-0.0
2,754,170	+				+1.2
2,754,195	+				-0.6
2,754,196	-				-0.3
2,754,196	-				+0.9
2,754,196	-				-0.6
2,754,201	-				+1.7
2,754,201	-				-0.2
2,754,205	+				-0.8
2,754,206	-				+0.9
2,754,217	+				-0.2
2,754,217	+				-0.1
2,754,221	+				+0.5
2,754,221	+				+0.1
2,754,223	+				+1.0
2,754,223	+				+2.1
2,754,223	+				+1.5
2,754,223	+				-0.6
2,754,223	+				-0.1
2,754,223	+				+0.5
2,754,227	+				-1.7
2,754,240	+				+2.2
2,754,241	-				-0.8
2,754,280	+				-1.0
2,754,329	-		EFB2_02603	0.17	+0.6
2,754,409	+		EFB2_02603	0.32	-0.1
2,754,438	+		EFB2_02603	0.38	+0.0
2,754,438	+		EFB2_02603	0.38	+0.5
2,754,442	+		EFB2_02603	0.39	-0.3
2,754,442	+		EFB2_02603	0.39	+0.0
2,754,442	+		EFB2_02603	0.39	+0.4
2,754,442	+		EFB2_02603	0.39	+1.3
2,754,442	+		EFB2_02603	0.39	-0.8
2,754,442	+		EFB2_02603	0.39	+1.2
2,754,442	+		EFB2_02603	0.39	+0.3
2,754,442	+		EFB2_02603	0.39	-2.6
2,754,442	+		EFB2_02603	0.39	+1.7
2,754,442	+		EFB2_02603	0.39	-0.1
2,754,442	+		EFB2_02603	0.39	+1.0
2,754,443	-		EFB2_02603	0.39	+1.4
2,754,443	-		EFB2_02603	0.39	-2.1
2,754,448	+		EFB2_02603	0.40	-0.8
2,754,490	+		EFB2_02603	0.48	-1.0
2,754,490	+		EFB2_02603	0.48	+0.8
2,754,490	+		EFB2_02603	0.48	-2.2
2,754,490	+		EFB2_02603	0.48	-2.4
2,754,490	+		EFB2_02603	0.48	+0.9
2,754,490	+		EFB2_02603	0.48	+1.4
2,754,490	+		EFB2_02603	0.48	+0.1
2,754,490	+		EFB2_02603	0.48	+1.7
2,754,490	+		EFB2_02603	0.48	+1.9
2,754,490	+		EFB2_02603	0.48	-0.8
2,754,490	+		EFB2_02603	0.48	-0.3
2,754,490	+		EFB2_02603	0.48	-1.1
2,754,490	+		EFB2_02603	0.48	-0.3
2,754,491	-		EFB2_02603	0.49	+2.2
2,754,491	-		EFB2_02603	0.49	+1.1
2,754,491	-		EFB2_02603	0.49	+0.9
2,754,491	-		EFB2_02603	0.49	-1.4
2,754,491	-		EFB2_02603	0.49	-0.4
2,754,553	+		EFB2_02603	0.61	-1.1
2,754,596	+		EFB2_02603	0.69	+1.2
2,754,596	+		EFB2_02603	0.69	+0.4
2,754,597	-		EFB2_02603	0.69	-0.2
2,754,719	+				-1.5
2,754,719	+				+0.6
2,754,720	-				-0.5
2,754,720	-				-0.9
2,754,749	+				-0.3
2,754,749	+				+0.7
2,754,749	+				+0.5
2,754,749	+				-1.7
2,754,749	+				+0.4
2,754,749	+				+0.8
2,754,749	+				+1.4
2,754,750	-				+0.6
2,754,750	-				+1.0
2,754,750	-				-1.8
2,754,750	-				+1.6
2,754,754	+				+0.2
2,754,754	+				+1.1
2,754,754	+				+1.2
2,754,754	+				-2.1
2,754,754	+				-0.2
2,754,754	+				-3.4
2,754,754	+				+3.0
2,754,754	+				-1.3
2,754,754	+				+0.0
2,754,754	+				-0.7
2,754,754	+				+0.3
2,754,754	+				+0.2
2,754,754	+				-0.7
2,754,754	+				-0.7
2,754,754	+				+0.8
2,754,754	+				+0.3
2,754,754	+				-1.1
2,754,754	+				+0.3
2,754,754	+				-0.9
2,754,754	+				+0.7
2,754,754	+				+1.6
2,754,755	-				-0.6
2,754,755	-				-1.5
2,754,755	-				+2.2
2,754,755	-				+1.2
2,754,755	-				+2.2
2,754,755	-				+0.6
2,754,755	-				-1.0
2,754,755	-				-1.3
2,754,755	-				+0.2
2,754,757	+				+1.1
2,754,757	+				-1.4
2,754,757	+				+0.4
2,754,757	+				-1.0
2,754,757	+				+0.3
2,754,758	-				-0.4
2,754,758	-				+0.8
2,754,786	+				+0.7
2,754,786	+				-0.3
2,754,786	+				-1.0
2,754,786	+				+0.1
2,754,787	-				+0.7
2,754,787	-				-1.0
2,754,796	+				+0.8
2,754,796	+				-0.5
2,754,796	+				+0.6
2,754,796	+				-0.3
2,754,796	+				-0.2
2,754,797	-				-1.9
2,754,797	-				-0.1
2,754,797	-				-0.1
2,754,797	-				-0.4
2,754,826	+				+1.9
2,754,826	+				-1.6
2,754,826	+				+0.3
2,754,827	-				-2.1
2,754,827	-				-0.1
2,754,839	+				+0.4
2,754,840	-				-0.0
2,754,840	-				+0.6
2,754,840	-				+1.0
2,754,840	-				-0.8
2,754,840	-				+0.5
2,754,855	-				-2.3
2,754,855	-				-0.9
2,754,855	-				-2.2
2,754,855	-				-0.0
2,754,898	+				-0.5
2,754,898	+				+0.2
2,754,898	+				-1.8
2,754,899	-				-2.3
2,754,919	-				-2.3
2,754,919	-				-0.3
2,755,004	-		EFB2_02604	0.14	-0.1
2,755,020	-		EFB2_02604	0.15	-1.9
2,755,020	-		EFB2_02604	0.15	+0.9
2,755,040	-		EFB2_02604	0.16	+0.3
2,755,067	-		EFB2_02604	0.18	+2.8
2,755,067	-		EFB2_02604	0.18	-1.5
2,755,067	-		EFB2_02604	0.18	-2.1
2,755,071	-		EFB2_02604	0.18	+0.2
2,755,071	-		EFB2_02604	0.18	+0.5
2,755,071	-		EFB2_02604	0.18	-1.9
2,755,071	-		EFB2_02604	0.18	-0.1
2,755,081	-		EFB2_02604	0.19	+0.6
2,755,109	-		EFB2_02604	0.20	+0.2
2,755,115	+		EFB2_02604	0.21	+2.2
2,755,116	-		EFB2_02604	0.21	+1.2
2,755,116	-		EFB2_02604	0.21	-1.7
2,755,116	-		EFB2_02604	0.21	+0.1
2,755,120	-		EFB2_02604	0.21	+0.6
2,755,120	-		EFB2_02604	0.21	+0.6
2,755,120	-		EFB2_02604	0.21	-0.4
2,755,120	-		EFB2_02604	0.21	+0.1
2,755,120	-		EFB2_02604	0.21	-0.1
2,755,120	-		EFB2_02604	0.21	-1.9
2,755,120	-		EFB2_02604	0.21	-0.5
2,755,120	-		EFB2_02604	0.21	+0.7
2,755,120	-		EFB2_02604	0.21	-1.6
2,755,120	-		EFB2_02604	0.21	-1.8
2,755,120	-		EFB2_02604	0.21	-2.2
2,755,120	-		EFB2_02604	0.21	-1.9
2,755,125	-		EFB2_02604	0.21	-2.6
2,755,268	-		EFB2_02604	0.31	-0.6
2,755,268	-		EFB2_02604	0.31	-0.9
2,755,268	-		EFB2_02604	0.31	+0.2
2,755,268	-		EFB2_02604	0.31	-1.3
2,755,323	-		EFB2_02604	0.34	-1.8
2,755,438	-		EFB2_02604	0.42	+0.0
2,755,438	-		EFB2_02604	0.42	-1.7
2,755,438	-		EFB2_02604	0.42	-1.6
2,755,438	-		EFB2_02604	0.42	+3.0
2,755,438	-		EFB2_02604	0.42	-0.3
2,755,438	-		EFB2_02604	0.42	-1.8
2,755,541	+		EFB2_02604	0.48	+0.2
2,755,604	-		EFB2_02604	0.52	+0.3
2,755,604	-		EFB2_02604	0.52	-0.5
2,755,604	-		EFB2_02604	0.52	-0.1
2,755,659	+		EFB2_02604	0.56	+0.9
2,755,660	-		EFB2_02604	0.56	-1.8
2,755,776	-		EFB2_02604	0.64	-1.4
2,755,776	-		EFB2_02604	0.64	-1.3
2,755,844	-		EFB2_02604	0.68	+1.8
2,755,844	-		EFB2_02604	0.68	-1.5
2,755,854	-		EFB2_02604	0.69	-1.7
2,755,880	+		EFB2_02604	0.70	-1.7
2,755,881	-		EFB2_02604	0.70	+0.3
2,755,881	-		EFB2_02604	0.70	-0.1
2,755,884	-		EFB2_02604	0.71	+1.2
2,755,941	-		EFB2_02604	0.74	+0.4
2,756,133	-		EFB2_02604	0.87	+0.7
2,756,133	-		EFB2_02604	0.87	-1.1
2,756,133	-		EFB2_02604	0.87	+1.7
2,756,133	-		EFB2_02604	0.87	-0.8
2,756,157	-		EFB2_02604	0.88	-0.6
2,756,157	-		EFB2_02604	0.88	-0.5
2,756,164	-		EFB2_02604	0.89	-0.8
2,756,164	-		EFB2_02604	0.89	+0.0
2,756,218	+				+2.2
2,756,219	-				-0.0
2,756,219	-				+1.1
2,756,247	-				-2.0
2,756,247	-				-1.3
2,756,254	-				+1.2
2,756,269	-				-1.4
2,756,269	-				+0.2
2,756,277	+				+1.5
2,756,278	-				+0.4
2,756,278	-				-3.7
2,756,278	-				-0.2
2,756,278	-				+0.9
2,756,278	-				-2.7
2,756,278	-				-0.6
2,756,278	-				+0.6
2,756,278	-				-0.0
2,756,286	+				-1.0
2,756,365	+				-2.6
2,756,365	+				+0.6
2,756,366	-				-2.0
2,756,366	-				+1.1
2,756,366	-				+1.3
2,756,366	-				-0.6
2,756,366	-				-0.2
2,756,366	-				-2.6
2,756,366	-				+1.0
2,756,366	-				-1.5
2,756,366	-				+1.2
2,756,369	-				-0.1
2,756,369	-				-0.6
2,756,377	-				+1.2
2,756,377	-				+0.9
2,756,377	-				-0.5
2,756,384	+				+0.2
2,756,384	+				+1.2
2,756,384	+				-1.9
2,756,384	+				-0.6
2,756,385	-				-2.3
2,756,385	-				-0.2
2,756,385	-				+2.2
2,756,385	-				+1.1
2,756,385	-				-2.3
2,756,385	-				+0.1
2,756,609	+		EFB2_02605	0.12	-0.3
2,756,609	+		EFB2_02605	0.12	-1.5
2,756,609	+		EFB2_02605	0.12	+0.3
2,756,609	+		EFB2_02605	0.12	+2.2
2,756,609	+		EFB2_02605	0.12	-1.2
2,756,610	-		EFB2_02605	0.12	-3.2
2,756,615	+		EFB2_02605	0.12	+2.1
2,756,615	+		EFB2_02605	0.12	-0.8
2,756,615	+		EFB2_02605	0.12	+1.8
2,756,615	+		EFB2_02605	0.12	-1.4
2,756,616	-		EFB2_02605	0.12	+2.9
2,756,616	-		EFB2_02605	0.12	+1.2
2,756,751	-		EFB2_02605	0.25	-1.7
2,756,751	-		EFB2_02605	0.25	+0.4
2,756,760	+		EFB2_02605	0.26	-2.1
2,756,761	-		EFB2_02605	0.26	-0.6
2,756,768	+		EFB2_02605	0.27	-2.6
2,756,769	-		EFB2_02605	0.27	-1.4
2,756,788	+		EFB2_02605	0.29	-1.2
2,756,788	+		EFB2_02605	0.29	-1.1
2,756,788	+		EFB2_02605	0.29	+2.2
2,756,788	+		EFB2_02605	0.29	-0.4
2,756,789	-		EFB2_02605	0.29	+0.5
2,756,789	-		EFB2_02605	0.29	+0.1
2,756,789	-		EFB2_02605	0.29	+1.0
2,756,789	-		EFB2_02605	0.29	+1.1
2,756,789	-		EFB2_02605	0.29	+1.3
2,756,791	+		EFB2_02605	0.29	-0.1
2,756,792	-		EFB2_02605	0.29	-1.2
2,756,809	+		EFB2_02605	0.31	+1.5
2,756,809	+		EFB2_02605	0.31	+1.5
2,756,809	+		EFB2_02605	0.31	-0.8
2,756,809	+		EFB2_02605	0.31	-0.2
2,756,810	-		EFB2_02605	0.31	+0.6
2,756,810	-		EFB2_02605	0.31	-1.0
2,756,898	+		EFB2_02605	0.39	+0.7
2,756,949	+		EFB2_02605	0.44	+3.5
2,756,949	+		EFB2_02605	0.44	+0.5
2,756,949	+		EFB2_02605	0.44	-1.7
2,756,950	-		EFB2_02605	0.44	-0.5
2,756,950	-		EFB2_02605	0.44	-0.0
2,756,950	-		EFB2_02605	0.44	+0.8
2,756,950	-		EFB2_02605	0.44	-1.4
2,756,950	-		EFB2_02605	0.44	-1.3
2,756,974	+		EFB2_02605	0.46	-0.7
2,756,974	+		EFB2_02605	0.46	+0.3
2,756,974	+		EFB2_02605	0.46	-2.9
2,756,974	+		EFB2_02605	0.46	-1.1
2,756,974	+		EFB2_02605	0.46	+0.8
2,756,975	-		EFB2_02605	0.46	+0.5
2,756,975	-		EFB2_02605	0.46	+0.7
2,756,975	-		EFB2_02605	0.46	-0.3
2,756,975	-		EFB2_02605	0.46	+0.9
2,756,975	-		EFB2_02605	0.46	-2.1
2,756,975	-		EFB2_02605	0.46	+0.6
2,756,975	-		EFB2_02605	0.46	-1.1
2,756,975	-		EFB2_02605	0.46	-0.1
2,756,975	-		EFB2_02605	0.46	-0.5
2,757,022	+		EFB2_02605	0.51	-2.1
2,757,022	+		EFB2_02605	0.51	+1.3
2,757,023	-		EFB2_02605	0.51	-1.0
2,757,023	-		EFB2_02605	0.51	+0.9
2,757,023	-		EFB2_02605	0.51	+1.0
2,757,023	-		EFB2_02605	0.51	+1.4
2,757,169	-		EFB2_02605	0.65	-1.5
2,757,169	-		EFB2_02605	0.65	+0.7
2,757,187	-		EFB2_02605	0.66	-0.4
2,757,198	+		EFB2_02605	0.67	+1.2
2,757,198	+		EFB2_02605	0.67	-1.0
2,757,199	-		EFB2_02605	0.67	+1.3
2,757,199	-		EFB2_02605	0.67	+1.2
2,757,199	-		EFB2_02605	0.67	+0.7
2,757,199	-		EFB2_02605	0.67	+1.7
2,757,199	-		EFB2_02605	0.67	+0.9
2,757,199	-		EFB2_02605	0.67	+0.4
2,757,199	-		EFB2_02605	0.67	-0.3