Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03110 and MPMX26_03111 are separated by 23 nucleotides MPMX26_03111 and MPMX26_03112 overlap by 14 nucleotides MPMX26_03112 and MPMX26_03113 are separated by 89 nucleotides MPMX26_03113 and MPMX26_03114 are separated by 148 nucleotides
MPMX26_03110: MPMX26_03110 - hypothetical protein, at 23,349 to 23,549
_03110
MPMX26_03111: MPMX26_03111 - hypothetical protein, at 23,573 to 24,493
_03111
MPMX26_03112: MPMX26_03112 - Copper resistance protein A, at 24,480 to 26,363
_03112
MPMX26_03113: MPMX26_03113 - hypothetical protein, at 26,453 to 26,749
_03113
MPMX26_03114: MPMX26_03114 - Transcriptional regulatory protein CusR, at 26,898 to 27,578
_03114
Position (kb) 24
25
26
27 Strain fitness (log2 ratio) -1
0
1
2
3 at 23.631 kb on - strand at 23.631 kb on - strand at 23.631 kb on - strand at 23.633 kb on - strand at 23.696 kb on - strand, within MPMX26_03111 at 23.696 kb on - strand, within MPMX26_03111 at 23.696 kb on - strand, within MPMX26_03111 at 23.696 kb on - strand, within MPMX26_03111 at 23.807 kb on - strand, within MPMX26_03111 at 23.890 kb on - strand, within MPMX26_03111 at 24.004 kb on - strand, within MPMX26_03111 at 24.037 kb on - strand, within MPMX26_03111 at 24.037 kb on - strand, within MPMX26_03111 at 24.037 kb on - strand, within MPMX26_03111 at 24.037 kb on - strand, within MPMX26_03111 at 24.152 kb on - strand, within MPMX26_03111 at 24.251 kb on - strand, within MPMX26_03111 at 24.251 kb on - strand, within MPMX26_03111 at 24.251 kb on - strand, within MPMX26_03111 at 24.266 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.281 kb on - strand, within MPMX26_03111 at 24.346 kb on - strand, within MPMX26_03111 at 24.392 kb on - strand, within MPMX26_03111 at 24.443 kb on - strand at 24.525 kb on - strand at 24.530 kb on - strand at 24.595 kb on - strand at 24.595 kb on - strand at 24.646 kb on + strand at 24.647 kb on - strand at 24.654 kb on - strand at 24.654 kb on - strand at 24.654 kb on - strand at 24.659 kb on - strand at 24.724 kb on - strand, within MPMX26_03112 at 24.725 kb on - strand, within MPMX26_03112 at 24.725 kb on - strand, within MPMX26_03112 at 24.725 kb on - strand, within MPMX26_03112 at 24.734 kb on - strand, within MPMX26_03112 at 24.735 kb on - strand, within MPMX26_03112 at 24.771 kb on - strand, within MPMX26_03112 at 24.776 kb on - strand, within MPMX26_03112 at 24.819 kb on - strand, within MPMX26_03112 at 24.927 kb on - strand, within MPMX26_03112 at 24.996 kb on - strand, within MPMX26_03112 at 25.002 kb on - strand, within MPMX26_03112 at 25.011 kb on - strand, within MPMX26_03112 at 25.013 kb on - strand, within MPMX26_03112 at 25.023 kb on - strand, within MPMX26_03112 at 25.068 kb on + strand, within MPMX26_03112 at 25.082 kb on - strand, within MPMX26_03112 at 25.082 kb on - strand, within MPMX26_03112 at 25.082 kb on - strand, within MPMX26_03112 at 25.083 kb on - strand, within MPMX26_03112 at 25.106 kb on - strand, within MPMX26_03112 at 25.111 kb on - strand, within MPMX26_03112 at 25.112 kb on - strand, within MPMX26_03112 at 25.112 kb on - strand, within MPMX26_03112 at 25.118 kb on - strand, within MPMX26_03112 at 25.142 kb on - strand, within MPMX26_03112 at 25.270 kb on - strand, within MPMX26_03112 at 25.304 kb on - strand, within MPMX26_03112 at 25.469 kb on - strand, within MPMX26_03112 at 25.485 kb on - strand, within MPMX26_03112 at 25.485 kb on - strand, within MPMX26_03112 at 25.490 kb on - strand, within MPMX26_03112 at 25.525 kb on - strand, within MPMX26_03112 at 25.530 kb on - strand, within MPMX26_03112 at 25.530 kb on - strand, within MPMX26_03112 at 25.530 kb on - strand, within MPMX26_03112 at 25.530 kb on - strand, within MPMX26_03112 at 25.623 kb on - strand, within MPMX26_03112 at 25.623 kb on - strand, within MPMX26_03112 at 25.623 kb on - strand, within MPMX26_03112 at 25.734 kb on - strand, within MPMX26_03112 at 25.970 kb on - strand, within MPMX26_03112 at 26.111 kb on - strand, within MPMX26_03112 at 26.169 kb on + strand, within MPMX26_03112 at 26.374 kb on - strand at 26.422 kb on + strand at 26.477 kb on - strand at 26.568 kb on - strand, within MPMX26_03113 at 26.711 kb on + strand, within MPMX26_03113 at 26.719 kb on - strand, within MPMX26_03113 at 26.951 kb on + strand at 26.991 kb on - strand, within MPMX26_03114 at 27.003 kb on + strand, within MPMX26_03114 at 27.242 kb on + strand, within MPMX26_03114 at 27.242 kb on + strand, within MPMX26_03114 at 27.252 kb on + strand, within MPMX26_03114 at 27.333 kb on + strand, within MPMX26_03114 at 27.340 kb on + strand, within MPMX26_03114
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 23,631 - +0.8 23,631 - +0.8 23,631 - -0.5 23,633 - -1.0 23,696 - MPMX26_03111 0.13 -0.2 23,696 - MPMX26_03111 0.13 +0.4 23,696 - MPMX26_03111 0.13 -0.1 23,696 - MPMX26_03111 0.13 -0.5 23,807 - MPMX26_03111 0.25 -0.8 23,890 - MPMX26_03111 0.34 -0.0 24,004 - MPMX26_03111 0.47 +0.6 24,037 - MPMX26_03111 0.50 +0.3 24,037 - MPMX26_03111 0.50 +3.1 24,037 - MPMX26_03111 0.50 +0.8 24,037 - MPMX26_03111 0.50 +0.4 24,152 - MPMX26_03111 0.63 +0.9 24,251 - MPMX26_03111 0.74 -0.8 24,251 - MPMX26_03111 0.74 -1.0 24,251 - MPMX26_03111 0.74 +0.8 24,266 - MPMX26_03111 0.75 -0.8 24,281 - MPMX26_03111 0.77 +0.4 24,281 - MPMX26_03111 0.77 +0.4 24,281 - MPMX26_03111 0.77 +0.3 24,281 - MPMX26_03111 0.77 +1.8 24,281 - MPMX26_03111 0.77 +0.4 24,281 - MPMX26_03111 0.77 +1.0 24,281 - MPMX26_03111 0.77 +0.6 24,281 - MPMX26_03111 0.77 -0.0 24,346 - MPMX26_03111 0.84 -0.3 24,392 - MPMX26_03111 0.89 -0.4 24,443 - -1.5 24,525 - -1.0 24,530 - +1.4 24,595 - +0.3 24,595 - -0.5 24,646 + +0.2 24,647 - -0.5 24,654 - -0.2 24,654 - -0.6 24,654 - +0.7 24,659 - +1.1 24,724 - MPMX26_03112 0.13 +0.1 24,725 - MPMX26_03112 0.13 +0.6 24,725 - MPMX26_03112 0.13 +0.2 24,725 - MPMX26_03112 0.13 -0.2 24,734 - MPMX26_03112 0.13 +0.1 24,735 - MPMX26_03112 0.14 +0.7 24,771 - MPMX26_03112 0.15 +0.4 24,776 - MPMX26_03112 0.16 -0.4 24,819 - MPMX26_03112 0.18 -0.6 24,927 - MPMX26_03112 0.24 -1.3 24,996 - MPMX26_03112 0.27 +0.3 25,002 - MPMX26_03112 0.28 +1.2 25,011 - MPMX26_03112 0.28 +0.8 25,013 - MPMX26_03112 0.28 -0.2 25,023 - MPMX26_03112 0.29 +0.1 25,068 + MPMX26_03112 0.31 +0.8 25,082 - MPMX26_03112 0.32 -1.0 25,082 - MPMX26_03112 0.32 +0.5 25,082 - MPMX26_03112 0.32 +0.3 25,083 - MPMX26_03112 0.32 +0.9 25,106 - MPMX26_03112 0.33 +0.8 25,111 - MPMX26_03112 0.33 -1.2 25,112 - MPMX26_03112 0.34 -0.8 25,112 - MPMX26_03112 0.34 -1.2 25,118 - MPMX26_03112 0.34 -0.7 25,142 - MPMX26_03112 0.35 -1.6 25,270 - MPMX26_03112 0.42 -0.6 25,304 - MPMX26_03112 0.44 +0.1 25,469 - MPMX26_03112 0.52 +0.6 25,485 - MPMX26_03112 0.53 +1.0 25,485 - MPMX26_03112 0.53 -0.5 25,490 - MPMX26_03112 0.54 +0.8 25,525 - MPMX26_03112 0.55 -0.0 25,530 - MPMX26_03112 0.56 +0.5 25,530 - MPMX26_03112 0.56 +1.1 25,530 - MPMX26_03112 0.56 -0.2 25,530 - MPMX26_03112 0.56 +0.8 25,623 - MPMX26_03112 0.61 -0.4 25,623 - MPMX26_03112 0.61 +1.8 25,623 - MPMX26_03112 0.61 +1.5 25,734 - MPMX26_03112 0.67 -1.3 25,970 - MPMX26_03112 0.79 -1.0 26,111 - MPMX26_03112 0.87 +0.4 26,169 + MPMX26_03112 0.90 +0.4 26,374 - +1.8 26,422 + -0.9 26,477 - +0.5 26,568 - MPMX26_03113 0.39 +0.0 26,711 + MPMX26_03113 0.87 -1.0 26,719 - MPMX26_03113 0.90 +1.0 26,951 + -0.4 26,991 - MPMX26_03114 0.14 +0.2 27,003 + MPMX26_03114 0.15 +0.3 27,242 + MPMX26_03114 0.51 -0.2 27,242 + MPMX26_03114 0.51 +0.2 27,252 + MPMX26_03114 0.52 +1.8 27,333 + MPMX26_03114 0.64 +0.4 27,340 + MPMX26_03114 0.65 +1.1
Or see this region's nucleotide sequence