Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02881 and MPMX26_02882 are separated by 428 nucleotides MPMX26_02882 and MPMX26_02883 are separated by 670 nucleotides
MPMX26_02881: MPMX26_02881 - hypothetical protein, at 2,979,804 to 2,981,102
_02881
MPMX26_02882: MPMX26_02882 - hypothetical protein, at 2,981,531 to 2,982,949
_02882
MPMX26_02883: MPMX26_02883 - Putative competence-damage inducible protein, at 2,983,620 to 2,984,090
_02883
Position (kb)
2981
2982
2983 Strain fitness (log2 ratio)
-1
0
1
2 at 2981.845 kb on - strand, within MPMX26_02882 at 2981.963 kb on - strand, within MPMX26_02882 at 2981.966 kb on - strand, within MPMX26_02882 at 2982.208 kb on - strand, within MPMX26_02882 at 2982.208 kb on - strand, within MPMX26_02882 at 2982.333 kb on - strand, within MPMX26_02882 at 2982.370 kb on - strand, within MPMX26_02882 at 2982.591 kb on + strand, within MPMX26_02882 at 2982.637 kb on - strand, within MPMX26_02882 at 2982.988 kb on - strand at 2983.587 kb on + strand at 2983.595 kb on + strand at 2983.679 kb on + strand, within MPMX26_02883 at 2983.754 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.817 kb on + strand, within MPMX26_02883 at 2983.829 kb on + strand, within MPMX26_02883 at 2983.895 kb on + strand, within MPMX26_02883 at 2983.895 kb on + strand, within MPMX26_02883 at 2983.895 kb on + strand, within MPMX26_02883 at 2983.895 kb on + strand, within MPMX26_02883 at 2983.900 kb on + strand, within MPMX26_02883 at 2983.900 kb on + strand, within MPMX26_02883 at 2983.900 kb on + strand, within MPMX26_02883 at 2983.900 kb on + strand, within MPMX26_02883 at 2983.905 kb on + strand, within MPMX26_02883 at 2983.905 kb on + strand, within MPMX26_02883 at 2983.905 kb on + strand, within MPMX26_02883 at 2983.910 kb on + strand, within MPMX26_02883
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,981,845 - MPMX26_02882 0.22 +1.2 2,981,963 - MPMX26_02882 0.30 +0.4 2,981,966 - MPMX26_02882 0.31 -0.1 2,982,208 - MPMX26_02882 0.48 -0.2 2,982,208 - MPMX26_02882 0.48 +0.3 2,982,333 - MPMX26_02882 0.57 +0.7 2,982,370 - MPMX26_02882 0.59 +0.4 2,982,591 + MPMX26_02882 0.75 +0.4 2,982,637 - MPMX26_02882 0.78 +1.2 2,982,988 - -0.5 2,983,587 + -0.4 2,983,595 + -0.4 2,983,679 + MPMX26_02883 0.13 +1.2 2,983,754 + MPMX26_02883 0.28 +0.3 2,983,817 + MPMX26_02883 0.42 -0.2 2,983,817 + MPMX26_02883 0.42 +0.3 2,983,817 + MPMX26_02883 0.42 -0.3 2,983,817 + MPMX26_02883 0.42 -0.2 2,983,817 + MPMX26_02883 0.42 -0.5 2,983,817 + MPMX26_02883 0.42 +0.4 2,983,817 + MPMX26_02883 0.42 -0.2 2,983,817 + MPMX26_02883 0.42 +0.5 2,983,817 + MPMX26_02883 0.42 -0.5 2,983,817 + MPMX26_02883 0.42 +0.4 2,983,817 + MPMX26_02883 0.42 +0.1 2,983,817 + MPMX26_02883 0.42 +0.1 2,983,817 + MPMX26_02883 0.42 +0.1 2,983,817 + MPMX26_02883 0.42 +0.8 2,983,817 + MPMX26_02883 0.42 +1.9 2,983,817 + MPMX26_02883 0.42 +0.4 2,983,829 + MPMX26_02883 0.44 +0.4 2,983,895 + MPMX26_02883 0.58 +0.2 2,983,895 + MPMX26_02883 0.58 -0.3 2,983,895 + MPMX26_02883 0.58 -0.5 2,983,895 + MPMX26_02883 0.58 +0.2 2,983,900 + MPMX26_02883 0.59 +0.3 2,983,900 + MPMX26_02883 0.59 +0.7 2,983,900 + MPMX26_02883 0.59 -0.6 2,983,900 + MPMX26_02883 0.59 -0.4 2,983,905 + MPMX26_02883 0.61 +0.9 2,983,905 + MPMX26_02883 0.61 +0.1 2,983,905 + MPMX26_02883 0.61 -0.4 2,983,910 + MPMX26_02883 0.62 -0.6
Or see this region's nucleotide sequence