Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02882

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02881 and MPMX26_02882 are separated by 428 nucleotidesMPMX26_02882 and MPMX26_02883 are separated by 670 nucleotides MPMX26_02881: MPMX26_02881 - hypothetical protein, at 2,979,804 to 2,981,102 _02881 MPMX26_02882: MPMX26_02882 - hypothetical protein, at 2,981,531 to 2,982,949 _02882 MPMX26_02883: MPMX26_02883 - Putative competence-damage inducible protein, at 2,983,620 to 2,984,090 _02883 Position (kb) 2981 2982 2983Strain fitness (log2 ratio) -1 0 1 2at 2981.845 kb on - strand, within MPMX26_02882at 2981.963 kb on - strand, within MPMX26_02882at 2981.966 kb on - strand, within MPMX26_02882at 2982.208 kb on - strand, within MPMX26_02882at 2982.208 kb on - strand, within MPMX26_02882at 2982.333 kb on - strand, within MPMX26_02882at 2982.370 kb on - strand, within MPMX26_02882at 2982.591 kb on + strand, within MPMX26_02882at 2982.637 kb on - strand, within MPMX26_02882at 2982.988 kb on - strandat 2983.587 kb on + strandat 2983.595 kb on + strandat 2983.679 kb on + strand, within MPMX26_02883at 2983.754 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.817 kb on + strand, within MPMX26_02883at 2983.829 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.895 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.900 kb on + strand, within MPMX26_02883at 2983.905 kb on + strand, within MPMX26_02883at 2983.905 kb on + strand, within MPMX26_02883at 2983.905 kb on + strand, within MPMX26_02883at 2983.910 kb on + strand, within MPMX26_02883

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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2,981,845 - MPMX26_02882 0.22 +1.2
2,981,963 - MPMX26_02882 0.30 +0.4
2,981,966 - MPMX26_02882 0.31 -0.1
2,982,208 - MPMX26_02882 0.48 -0.2
2,982,208 - MPMX26_02882 0.48 +0.3
2,982,333 - MPMX26_02882 0.57 +0.7
2,982,370 - MPMX26_02882 0.59 +0.4
2,982,591 + MPMX26_02882 0.75 +0.4
2,982,637 - MPMX26_02882 0.78 +1.2
2,982,988 - -0.5
2,983,587 + -0.4
2,983,595 + -0.4
2,983,679 + MPMX26_02883 0.13 +1.2
2,983,754 + MPMX26_02883 0.28 +0.3
2,983,817 + MPMX26_02883 0.42 -0.2
2,983,817 + MPMX26_02883 0.42 +0.3
2,983,817 + MPMX26_02883 0.42 -0.3
2,983,817 + MPMX26_02883 0.42 -0.2
2,983,817 + MPMX26_02883 0.42 -0.5
2,983,817 + MPMX26_02883 0.42 +0.4
2,983,817 + MPMX26_02883 0.42 -0.2
2,983,817 + MPMX26_02883 0.42 +0.5
2,983,817 + MPMX26_02883 0.42 -0.5
2,983,817 + MPMX26_02883 0.42 +0.4
2,983,817 + MPMX26_02883 0.42 +0.1
2,983,817 + MPMX26_02883 0.42 +0.1
2,983,817 + MPMX26_02883 0.42 +0.1
2,983,817 + MPMX26_02883 0.42 +0.8
2,983,817 + MPMX26_02883 0.42 +1.9
2,983,817 + MPMX26_02883 0.42 +0.4
2,983,829 + MPMX26_02883 0.44 +0.4
2,983,895 + MPMX26_02883 0.58 +0.2
2,983,895 + MPMX26_02883 0.58 -0.3
2,983,895 + MPMX26_02883 0.58 -0.5
2,983,895 + MPMX26_02883 0.58 +0.2
2,983,900 + MPMX26_02883 0.59 +0.3
2,983,900 + MPMX26_02883 0.59 +0.7
2,983,900 + MPMX26_02883 0.59 -0.6
2,983,900 + MPMX26_02883 0.59 -0.4
2,983,905 + MPMX26_02883 0.61 +0.9
2,983,905 + MPMX26_02883 0.61 +0.1
2,983,905 + MPMX26_02883 0.61 -0.4
2,983,910 + MPMX26_02883 0.62 -0.6

Or see this region's nucleotide sequence