Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01876 and MPMX26_01877 overlap by 8 nucleotides MPMX26_01877 and MPMX26_01878 are separated by 109 nucleotides MPMX26_01878 and MPMX26_01879 are separated by 102 nucleotides
MPMX26_01876: MPMX26_01876 - tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ, at 1,918,024 to 1,918,866
_01876
MPMX26_01877: MPMX26_01877 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, at 1,918,859 to 1,919,677
_01877
MPMX26_01878: MPMX26_01878 - hypothetical protein, at 1,919,787 to 1,920,761
_01878
MPMX26_01879: MPMX26_01879 - hypothetical protein, at 1,920,864 to 1,922,915
_01879
Position (kb)
1919
1920
1921 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1918.800 kb on + strand at 1918.807 kb on + strand at 1918.807 kb on + strand at 1918.812 kb on + strand at 1919.383 kb on + strand, within MPMX26_01877 at 1919.383 kb on + strand, within MPMX26_01877 at 1919.451 kb on + strand, within MPMX26_01877 at 1919.487 kb on + strand, within MPMX26_01877 at 1919.564 kb on + strand, within MPMX26_01877 at 1919.651 kb on + strand at 1919.651 kb on + strand at 1919.651 kb on + strand at 1919.799 kb on + strand at 1919.799 kb on + strand at 1919.799 kb on + strand at 1919.799 kb on + strand at 1919.799 kb on + strand at 1919.804 kb on + strand at 1919.812 kb on - strand at 1919.820 kb on + strand at 1919.840 kb on + strand at 1919.868 kb on + strand at 1920.003 kb on + strand, within MPMX26_01878 at 1920.010 kb on + strand, within MPMX26_01878 at 1920.015 kb on + strand, within MPMX26_01878 at 1920.017 kb on + strand, within MPMX26_01878 at 1920.017 kb on + strand, within MPMX26_01878 at 1920.017 kb on + strand, within MPMX26_01878 at 1920.032 kb on + strand, within MPMX26_01878 at 1920.032 kb on + strand, within MPMX26_01878 at 1920.032 kb on + strand, within MPMX26_01878 at 1920.032 kb on + strand, within MPMX26_01878 at 1920.042 kb on + strand, within MPMX26_01878 at 1920.179 kb on + strand, within MPMX26_01878 at 1920.179 kb on + strand, within MPMX26_01878 at 1920.193 kb on + strand, within MPMX26_01878 at 1920.254 kb on + strand, within MPMX26_01878 at 1920.294 kb on + strand, within MPMX26_01878 at 1920.294 kb on + strand, within MPMX26_01878 at 1920.294 kb on + strand, within MPMX26_01878 at 1920.319 kb on + strand, within MPMX26_01878 at 1920.319 kb on + strand, within MPMX26_01878 at 1920.319 kb on + strand, within MPMX26_01878 at 1920.319 kb on + strand, within MPMX26_01878 at 1920.334 kb on + strand, within MPMX26_01878 at 1920.334 kb on + strand, within MPMX26_01878 at 1920.334 kb on + strand, within MPMX26_01878 at 1920.334 kb on + strand, within MPMX26_01878 at 1920.433 kb on + strand, within MPMX26_01878 at 1920.433 kb on + strand, within MPMX26_01878 at 1920.433 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.443 kb on + strand, within MPMX26_01878 at 1920.451 kb on + strand, within MPMX26_01878 at 1920.482 kb on + strand, within MPMX26_01878 at 1920.615 kb on + strand, within MPMX26_01878 at 1920.623 kb on + strand, within MPMX26_01878 at 1920.701 kb on + strand at 1920.701 kb on + strand at 1920.708 kb on + strand at 1920.708 kb on + strand at 1920.708 kb on + strand at 1920.708 kb on + strand at 1920.713 kb on + strand at 1920.713 kb on + strand at 1920.713 kb on + strand at 1920.723 kb on + strand at 1920.723 kb on + strand at 1920.723 kb on + strand at 1920.723 kb on + strand at 1920.723 kb on + strand at 1920.723 kb on + strand at 1920.723 kb on + strand at 1920.723 kb on + strand at 1920.733 kb on + strand at 1920.733 kb on + strand at 1920.733 kb on + strand at 1920.739 kb on + strand at 1920.739 kb on + strand at 1920.739 kb on + strand at 1920.739 kb on + strand at 1920.739 kb on + strand at 1920.936 kb on - strand at 1920.961 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 1,918,800 + -0.3 1,918,807 + +0.2 1,918,807 + +0.3 1,918,812 + +0.4 1,919,383 + MPMX26_01877 0.64 -6.0 1,919,383 + MPMX26_01877 0.64 -4.9 1,919,451 + MPMX26_01877 0.72 -1.9 1,919,487 + MPMX26_01877 0.77 -2.9 1,919,564 + MPMX26_01877 0.86 -1.5 1,919,651 + -1.8 1,919,651 + -1.5 1,919,651 + -1.7 1,919,799 + -0.6 1,919,799 + -0.6 1,919,799 + +0.1 1,919,799 + -1.2 1,919,799 + +0.2 1,919,804 + -0.7 1,919,812 - -0.3 1,919,820 + +0.0 1,919,840 + -0.3 1,919,868 + -0.9 1,920,003 + MPMX26_01878 0.22 -0.5 1,920,010 + MPMX26_01878 0.23 -1.6 1,920,015 + MPMX26_01878 0.23 -0.2 1,920,017 + MPMX26_01878 0.24 -1.1 1,920,017 + MPMX26_01878 0.24 -0.5 1,920,017 + MPMX26_01878 0.24 -0.3 1,920,032 + MPMX26_01878 0.25 -0.1 1,920,032 + MPMX26_01878 0.25 -0.5 1,920,032 + MPMX26_01878 0.25 -0.4 1,920,032 + MPMX26_01878 0.25 -0.0 1,920,042 + MPMX26_01878 0.26 -1.0 1,920,179 + MPMX26_01878 0.40 -1.1 1,920,179 + MPMX26_01878 0.40 -0.1 1,920,193 + MPMX26_01878 0.42 -0.1 1,920,254 + MPMX26_01878 0.48 -0.1 1,920,294 + MPMX26_01878 0.52 -0.3 1,920,294 + MPMX26_01878 0.52 -0.0 1,920,294 + MPMX26_01878 0.52 -0.4 1,920,319 + MPMX26_01878 0.55 +0.9 1,920,319 + MPMX26_01878 0.55 -0.9 1,920,319 + MPMX26_01878 0.55 -2.0 1,920,319 + MPMX26_01878 0.55 -0.2 1,920,334 + MPMX26_01878 0.56 +0.2 1,920,334 + MPMX26_01878 0.56 +0.4 1,920,334 + MPMX26_01878 0.56 -0.6 1,920,334 + MPMX26_01878 0.56 +1.4 1,920,433 + MPMX26_01878 0.66 +0.9 1,920,433 + MPMX26_01878 0.66 +0.9 1,920,433 + MPMX26_01878 0.66 +0.3 1,920,443 + MPMX26_01878 0.67 -0.7 1,920,443 + MPMX26_01878 0.67 -0.4 1,920,443 + MPMX26_01878 0.67 -1.4 1,920,443 + MPMX26_01878 0.67 -1.1 1,920,443 + MPMX26_01878 0.67 +0.0 1,920,443 + MPMX26_01878 0.67 -1.8 1,920,443 + MPMX26_01878 0.67 -0.7 1,920,443 + MPMX26_01878 0.67 -0.6 1,920,443 + MPMX26_01878 0.67 -0.1 1,920,443 + MPMX26_01878 0.67 -0.1 1,920,443 + MPMX26_01878 0.67 -0.1 1,920,443 + MPMX26_01878 0.67 -0.3 1,920,443 + MPMX26_01878 0.67 -1.2 1,920,443 + MPMX26_01878 0.67 -0.5 1,920,443 + MPMX26_01878 0.67 -0.1 1,920,443 + MPMX26_01878 0.67 -0.5 1,920,443 + MPMX26_01878 0.67 -0.8 1,920,443 + MPMX26_01878 0.67 -1.5 1,920,443 + MPMX26_01878 0.67 -0.9 1,920,443 + MPMX26_01878 0.67 -0.8 1,920,443 + MPMX26_01878 0.67 -0.5 1,920,443 + MPMX26_01878 0.67 -0.6 1,920,443 + MPMX26_01878 0.67 -2.0 1,920,443 + MPMX26_01878 0.67 -0.6 1,920,443 + MPMX26_01878 0.67 -0.8 1,920,443 + MPMX26_01878 0.67 -0.9 1,920,443 + MPMX26_01878 0.67 -0.8 1,920,443 + MPMX26_01878 0.67 -0.8 1,920,443 + MPMX26_01878 0.67 +0.3 1,920,443 + MPMX26_01878 0.67 -0.7 1,920,443 + MPMX26_01878 0.67 +0.4 1,920,443 + MPMX26_01878 0.67 -1.0 1,920,451 + MPMX26_01878 0.68 -0.6 1,920,482 + MPMX26_01878 0.71 -0.4 1,920,615 + MPMX26_01878 0.85 -0.9 1,920,623 + MPMX26_01878 0.86 -0.4 1,920,701 + +0.5 1,920,701 + +0.1 1,920,708 + -0.4 1,920,708 + -0.2 1,920,708 + -0.0 1,920,708 + +0.3 1,920,713 + -0.4 1,920,713 + +0.0 1,920,713 + +0.4 1,920,723 + +0.3 1,920,723 + +0.1 1,920,723 + -0.1 1,920,723 + +0.2 1,920,723 + +0.2 1,920,723 + +0.3 1,920,723 + +0.2 1,920,723 + +0.1 1,920,733 + -0.4 1,920,733 + +0.2 1,920,733 + -0.1 1,920,739 + +0.0 1,920,739 + +0.5 1,920,739 + +0.9 1,920,739 + +0.2 1,920,739 + +0.1 1,920,936 - -0.9 1,920,961 + -0.2
Or see this region's nucleotide sequence