Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01642

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01639 and MPMX26_01640 are separated by 22 nucleotidesMPMX26_01640 and MPMX26_01641 overlap by 11 nucleotidesMPMX26_01641 and MPMX26_01642 are separated by 128 nucleotidesMPMX26_01642 and MPMX26_01643 are separated by 311 nucleotidesMPMX26_01643 and MPMX26_01644 are separated by 13 nucleotides MPMX26_01639: MPMX26_01639 - hypothetical protein, at 1,700,314 to 1,701,165 _01639 MPMX26_01640: MPMX26_01640 - hypothetical protein, at 1,701,188 to 1,701,577 _01640 MPMX26_01641: MPMX26_01641 - Protein YcgL, at 1,701,567 to 1,701,878 _01641 MPMX26_01642: MPMX26_01642 - Ribonuclease D, at 1,702,007 to 1,703,149 _01642 MPMX26_01643: MPMX26_01643 - Recombination protein RecR, at 1,703,461 to 1,704,057 _01643 MPMX26_01644: MPMX26_01644 - Nucleoid-associated protein YbaB, at 1,704,071 to 1,704,400 _01644 Position (kb) 1702 1703 1704Strain fitness (log2 ratio) -2 -1 0 1at 1701.049 kb on - strand, within MPMX26_01639at 1701.061 kb on - strand, within MPMX26_01639at 1701.061 kb on - strand, within MPMX26_01639at 1701.061 kb on - strand, within MPMX26_01639at 1701.061 kb on - strand, within MPMX26_01639at 1701.061 kb on - strand, within MPMX26_01639at 1701.061 kb on - strand, within MPMX26_01639at 1701.061 kb on - strand, within MPMX26_01639at 1701.132 kb on - strandat 1701.211 kb on - strandat 1701.223 kb on - strandat 1701.232 kb on - strand, within MPMX26_01640at 1701.233 kb on - strand, within MPMX26_01640at 1701.336 kb on - strand, within MPMX26_01640at 1701.336 kb on - strand, within MPMX26_01640at 1701.336 kb on - strand, within MPMX26_01640at 1701.336 kb on - strand, within MPMX26_01640at 1701.363 kb on - strand, within MPMX26_01640at 1701.363 kb on - strand, within MPMX26_01640at 1701.364 kb on - strand, within MPMX26_01640at 1701.391 kb on - strand, within MPMX26_01640at 1701.430 kb on - strand, within MPMX26_01640at 1701.440 kb on - strand, within MPMX26_01640at 1701.456 kb on - strand, within MPMX26_01640at 1701.461 kb on - strand, within MPMX26_01640at 1701.493 kb on - strand, within MPMX26_01640at 1701.509 kb on - strand, within MPMX26_01640at 1701.517 kb on - strand, within MPMX26_01640at 1701.543 kb on - strandat 1701.563 kb on - strandat 1701.584 kb on - strandat 1701.606 kb on - strand, within MPMX26_01641at 1701.606 kb on - strand, within MPMX26_01641at 1701.758 kb on - strand, within MPMX26_01641at 1701.758 kb on - strand, within MPMX26_01641at 1701.758 kb on - strand, within MPMX26_01641at 1701.758 kb on - strand, within MPMX26_01641at 1701.777 kb on - strand, within MPMX26_01641at 1701.777 kb on - strand, within MPMX26_01641at 1701.793 kb on - strand, within MPMX26_01641at 1701.793 kb on - strand, within MPMX26_01641at 1701.801 kb on - strand, within MPMX26_01641at 1701.811 kb on - strand, within MPMX26_01641at 1701.834 kb on - strand, within MPMX26_01641at 1701.842 kb on - strand, within MPMX26_01641at 1701.842 kb on - strand, within MPMX26_01641at 1701.859 kb on - strandat 1702.049 kb on - strandat 1702.089 kb on - strandat 1702.105 kb on - strandat 1702.158 kb on - strand, within MPMX26_01642at 1702.186 kb on - strand, within MPMX26_01642at 1702.186 kb on - strand, within MPMX26_01642at 1702.226 kb on - strand, within MPMX26_01642at 1702.286 kb on - strand, within MPMX26_01642at 1702.303 kb on - strand, within MPMX26_01642at 1702.303 kb on - strand, within MPMX26_01642at 1702.333 kb on - strand, within MPMX26_01642at 1702.478 kb on - strand, within MPMX26_01642at 1702.478 kb on - strand, within MPMX26_01642at 1702.478 kb on - strand, within MPMX26_01642at 1702.505 kb on - strand, within MPMX26_01642at 1702.505 kb on - strand, within MPMX26_01642at 1702.559 kb on - strand, within MPMX26_01642at 1702.573 kb on - strand, within MPMX26_01642at 1702.573 kb on - strand, within MPMX26_01642at 1702.610 kb on - strand, within MPMX26_01642at 1702.610 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.618 kb on - strand, within MPMX26_01642at 1702.661 kb on - strand, within MPMX26_01642at 1702.661 kb on - strand, within MPMX26_01642at 1702.690 kb on - strand, within MPMX26_01642at 1702.690 kb on - strand, within MPMX26_01642at 1702.709 kb on - strand, within MPMX26_01642at 1702.714 kb on - strand, within MPMX26_01642at 1702.714 kb on - strand, within MPMX26_01642at 1702.714 kb on - strand, within MPMX26_01642at 1702.750 kb on - strand, within MPMX26_01642at 1702.759 kb on - strand, within MPMX26_01642at 1702.786 kb on - strand, within MPMX26_01642at 1702.819 kb on - strand, within MPMX26_01642at 1702.970 kb on - strand, within MPMX26_01642at 1702.970 kb on - strand, within MPMX26_01642at 1702.970 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1702.978 kb on - strand, within MPMX26_01642at 1703.018 kb on - strand, within MPMX26_01642at 1703.149 kb on - strandat 1703.490 kb on - strandat 1703.490 kb on - strandat 1703.501 kb on - strandat 1703.507 kb on - strandat 1703.507 kb on - strandat 1703.507 kb on - strandat 1703.514 kb on - strandat 1703.539 kb on - strand, within MPMX26_01643at 1703.543 kb on - strand, within MPMX26_01643at 1703.543 kb on - strand, within MPMX26_01643at 1703.543 kb on - strand, within MPMX26_01643at 1703.622 kb on - strand, within MPMX26_01643at 1703.622 kb on - strand, within MPMX26_01643at 1703.629 kb on - strand, within MPMX26_01643at 1703.630 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.689 kb on - strand, within MPMX26_01643at 1703.694 kb on - strand, within MPMX26_01643at 1703.698 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.708 kb on - strand, within MPMX26_01643at 1703.713 kb on - strand, within MPMX26_01643at 1703.743 kb on - strand, within MPMX26_01643at 1703.750 kb on - strand, within MPMX26_01643at 1703.813 kb on - strand, within MPMX26_01643at 1703.813 kb on - strand, within MPMX26_01643at 1703.813 kb on - strand, within MPMX26_01643at 1703.815 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.818 kb on - strand, within MPMX26_01643at 1703.857 kb on - strand, within MPMX26_01643at 1703.867 kb on - strand, within MPMX26_01643at 1703.867 kb on - strand, within MPMX26_01643at 1703.882 kb on - strand, within MPMX26_01643at 1703.932 kb on - strand, within MPMX26_01643at 1703.937 kb on - strand, within MPMX26_01643at 1703.942 kb on - strand, within MPMX26_01643at 1703.946 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1703.983 kb on - strand, within MPMX26_01643at 1704.044 kb on - strandat 1704.044 kb on - strandat 1704.044 kb on - strandat 1704.044 kb on - strandat 1704.064 kb on - strandat 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644at 1704.109 kb on - strand, within MPMX26_01644

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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1,701,049 - MPMX26_01639 0.86 +0.1
1,701,061 - MPMX26_01639 0.88 +0.8
1,701,061 - MPMX26_01639 0.88 -0.2
1,701,061 - MPMX26_01639 0.88 -0.5
1,701,061 - MPMX26_01639 0.88 -0.4
1,701,061 - MPMX26_01639 0.88 +0.6
1,701,061 - MPMX26_01639 0.88 +0.5
1,701,061 - MPMX26_01639 0.88 +0.1
1,701,132 - -0.1
1,701,211 - -1.1
1,701,223 - +0.2
1,701,232 - MPMX26_01640 0.11 -0.2
1,701,233 - MPMX26_01640 0.12 -0.0
1,701,336 - MPMX26_01640 0.38 +0.3
1,701,336 - MPMX26_01640 0.38 -0.1
1,701,336 - MPMX26_01640 0.38 +0.3
1,701,336 - MPMX26_01640 0.38 -0.2
1,701,363 - MPMX26_01640 0.45 +0.1
1,701,363 - MPMX26_01640 0.45 +0.0
1,701,364 - MPMX26_01640 0.45 +0.1
1,701,391 - MPMX26_01640 0.52 -0.3
1,701,430 - MPMX26_01640 0.62 -1.3
1,701,440 - MPMX26_01640 0.65 -0.5
1,701,456 - MPMX26_01640 0.69 -0.4
1,701,461 - MPMX26_01640 0.70 -0.2
1,701,493 - MPMX26_01640 0.78 -0.3
1,701,509 - MPMX26_01640 0.82 -0.5
1,701,517 - MPMX26_01640 0.84 -0.4
1,701,543 - -0.0
1,701,563 - -0.6
1,701,584 - -0.0
1,701,606 - MPMX26_01641 0.12 +0.4
1,701,606 - MPMX26_01641 0.12 -0.1
1,701,758 - MPMX26_01641 0.61 -0.4
1,701,758 - MPMX26_01641 0.61 -0.1
1,701,758 - MPMX26_01641 0.61 +0.0
1,701,758 - MPMX26_01641 0.61 +0.2
1,701,777 - MPMX26_01641 0.67 -0.1
1,701,777 - MPMX26_01641 0.67 +0.2
1,701,793 - MPMX26_01641 0.72 +0.3
1,701,793 - MPMX26_01641 0.72 +0.0
1,701,801 - MPMX26_01641 0.75 -0.1
1,701,811 - MPMX26_01641 0.78 +0.4
1,701,834 - MPMX26_01641 0.86 -0.1
1,701,842 - MPMX26_01641 0.88 +0.1
1,701,842 - MPMX26_01641 0.88 +0.1
1,701,859 - -0.1
1,702,049 - +0.1
1,702,089 - +0.4
1,702,105 - -0.4
1,702,158 - MPMX26_01642 0.13 -0.1
1,702,186 - MPMX26_01642 0.16 -0.3
1,702,186 - MPMX26_01642 0.16 -0.1
1,702,226 - MPMX26_01642 0.19 +0.0
1,702,286 - MPMX26_01642 0.24 -0.1
1,702,303 - MPMX26_01642 0.26 -0.1
1,702,303 - MPMX26_01642 0.26 -0.2
1,702,333 - MPMX26_01642 0.29 +0.1
1,702,478 - MPMX26_01642 0.41 -0.1
1,702,478 - MPMX26_01642 0.41 -0.2
1,702,478 - MPMX26_01642 0.41 -0.2
1,702,505 - MPMX26_01642 0.44 -0.3
1,702,505 - MPMX26_01642 0.44 -0.2
1,702,559 - MPMX26_01642 0.48 -0.6
1,702,573 - MPMX26_01642 0.50 -0.1
1,702,573 - MPMX26_01642 0.50 -0.2
1,702,610 - MPMX26_01642 0.53 -0.5
1,702,610 - MPMX26_01642 0.53 -0.3
1,702,618 - MPMX26_01642 0.53 -0.0
1,702,618 - MPMX26_01642 0.53 -0.5
1,702,618 - MPMX26_01642 0.53 -0.3
1,702,618 - MPMX26_01642 0.53 -0.2
1,702,618 - MPMX26_01642 0.53 +0.7
1,702,661 - MPMX26_01642 0.57 +0.0
1,702,661 - MPMX26_01642 0.57 -0.5
1,702,690 - MPMX26_01642 0.60 +0.2
1,702,690 - MPMX26_01642 0.60 -0.3
1,702,709 - MPMX26_01642 0.61 -0.2
1,702,714 - MPMX26_01642 0.62 -0.1
1,702,714 - MPMX26_01642 0.62 -0.2
1,702,714 - MPMX26_01642 0.62 +0.3
1,702,750 - MPMX26_01642 0.65 -0.3
1,702,759 - MPMX26_01642 0.66 -0.1
1,702,786 - MPMX26_01642 0.68 -0.3
1,702,819 - MPMX26_01642 0.71 -0.3
1,702,970 - MPMX26_01642 0.84 -0.1
1,702,970 - MPMX26_01642 0.84 -0.7
1,702,970 - MPMX26_01642 0.84 +1.1
1,702,978 - MPMX26_01642 0.85 -0.4
1,702,978 - MPMX26_01642 0.85 -0.1
1,702,978 - MPMX26_01642 0.85 -0.5
1,702,978 - MPMX26_01642 0.85 -0.4
1,702,978 - MPMX26_01642 0.85 -0.1
1,702,978 - MPMX26_01642 0.85 -0.7
1,702,978 - MPMX26_01642 0.85 -0.4
1,703,018 - MPMX26_01642 0.88 -0.1
1,703,149 - -0.1
1,703,490 - +0.1
1,703,490 - +0.2
1,703,501 - +0.8
1,703,507 - +0.0
1,703,507 - -0.5
1,703,507 - +0.1
1,703,514 - +0.5
1,703,539 - MPMX26_01643 0.13 -0.1
1,703,543 - MPMX26_01643 0.14 +0.1
1,703,543 - MPMX26_01643 0.14 +0.2
1,703,543 - MPMX26_01643 0.14 +0.3
1,703,622 - MPMX26_01643 0.27 +0.3
1,703,622 - MPMX26_01643 0.27 +0.2
1,703,629 - MPMX26_01643 0.28 -0.1
1,703,630 - MPMX26_01643 0.28 +0.5
1,703,689 - MPMX26_01643 0.38 -0.2
1,703,689 - MPMX26_01643 0.38 -0.5
1,703,689 - MPMX26_01643 0.38 +0.1
1,703,689 - MPMX26_01643 0.38 -0.3
1,703,689 - MPMX26_01643 0.38 +0.3
1,703,689 - MPMX26_01643 0.38 -0.1
1,703,689 - MPMX26_01643 0.38 +0.0
1,703,694 - MPMX26_01643 0.39 +0.3
1,703,698 - MPMX26_01643 0.40 +0.1
1,703,708 - MPMX26_01643 0.41 +0.1
1,703,708 - MPMX26_01643 0.41 +0.1
1,703,708 - MPMX26_01643 0.41 -0.0
1,703,708 - MPMX26_01643 0.41 +0.2
1,703,708 - MPMX26_01643 0.41 +0.1
1,703,708 - MPMX26_01643 0.41 +0.7
1,703,713 - MPMX26_01643 0.42 +0.1
1,703,743 - MPMX26_01643 0.47 +0.1
1,703,750 - MPMX26_01643 0.48 +0.1
1,703,813 - MPMX26_01643 0.59 -0.3
1,703,813 - MPMX26_01643 0.59 -0.1
1,703,813 - MPMX26_01643 0.59 +0.9
1,703,815 - MPMX26_01643 0.59 +0.1
1,703,818 - MPMX26_01643 0.60 +0.1
1,703,818 - MPMX26_01643 0.60 +0.0
1,703,818 - MPMX26_01643 0.60 -0.2
1,703,818 - MPMX26_01643 0.60 +0.2
1,703,818 - MPMX26_01643 0.60 +0.1
1,703,818 - MPMX26_01643 0.60 +0.5
1,703,818 - MPMX26_01643 0.60 +0.3
1,703,818 - MPMX26_01643 0.60 -0.2
1,703,818 - MPMX26_01643 0.60 -1.8
1,703,818 - MPMX26_01643 0.60 +0.3
1,703,818 - MPMX26_01643 0.60 +0.4
1,703,857 - MPMX26_01643 0.66 +0.2
1,703,867 - MPMX26_01643 0.68 +0.8
1,703,867 - MPMX26_01643 0.68 +0.5
1,703,882 - MPMX26_01643 0.71 +0.2
1,703,932 - MPMX26_01643 0.79 +0.3
1,703,937 - MPMX26_01643 0.80 +0.5
1,703,942 - MPMX26_01643 0.81 -0.5
1,703,946 - MPMX26_01643 0.81 -0.1
1,703,983 - MPMX26_01643 0.87 +0.8
1,703,983 - MPMX26_01643 0.87 +0.4
1,703,983 - MPMX26_01643 0.87 -0.3
1,703,983 - MPMX26_01643 0.87 -0.4
1,703,983 - MPMX26_01643 0.87 +0.1
1,703,983 - MPMX26_01643 0.87 -0.4
1,703,983 - MPMX26_01643 0.87 -0.2
1,703,983 - MPMX26_01643 0.87 +0.5
1,703,983 - MPMX26_01643 0.87 -0.1
1,703,983 - MPMX26_01643 0.87 -0.4
1,703,983 - MPMX26_01643 0.87 +0.3
1,703,983 - MPMX26_01643 0.87 -0.1
1,704,044 - -0.6
1,704,044 - -0.6
1,704,044 - +0.2
1,704,044 - +0.4
1,704,064 - +0.1
1,704,109 - MPMX26_01644 0.12 +0.1
1,704,109 - MPMX26_01644 0.12 -0.1
1,704,109 - MPMX26_01644 0.12 +0.6
1,704,109 - MPMX26_01644 0.12 +0.5
1,704,109 - MPMX26_01644 0.12 +0.1

Or see this region's nucleotide sequence