Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01221

Experiment: L-Alanine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01220 and MPMX26_01221 are separated by 9 nucleotidesMPMX26_01221 and MPMX26_01222 are separated by 17 nucleotides MPMX26_01220: MPMX26_01220 - Tetraacyldisaccharide 4'-kinase, at 1,295,346 to 1,296,356 _01220 MPMX26_01221: MPMX26_01221 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 1,296,366 to 1,297,127 _01221 MPMX26_01222: MPMX26_01222 - hypothetical protein, at 1,297,145 to 1,298,128 _01222 Position (kb) 1296 1297 1298Strain fitness (log2 ratio) -1 0 1at 1296.335 kb on + strandat 1297.094 kb on + strandat 1298.123 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
remove
1,296,335 + -0.8
1,297,094 + +0.2
1,298,123 + +0.6

Or see this region's nucleotide sequence