Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01122

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01120 and MPMX26_01121 are separated by 3 nucleotidesMPMX26_01121 and MPMX26_01122 are separated by 24 nucleotidesMPMX26_01122 and MPMX26_01123 are separated by 80 nucleotides MPMX26_01120: MPMX26_01120 - Dihydroorotate dehydrogenase (quinone), at 1,188,730 to 1,189,734 _01120 MPMX26_01121: MPMX26_01121 - hypothetical protein, at 1,189,738 to 1,190,325 _01121 MPMX26_01122: MPMX26_01122 - Amidophosphoribosyltransferase, at 1,190,350 to 1,191,888 _01122 MPMX26_01123: MPMX26_01123 - Protease HtpX, at 1,191,969 to 1,193,858 _01123 Position (kb) 1190 1191 1192Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1189.446 kb on + strand, within MPMX26_01120at 1189.462 kb on + strand, within MPMX26_01120at 1189.462 kb on + strand, within MPMX26_01120at 1189.485 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.501 kb on + strand, within MPMX26_01120at 1189.501 kb on + strand, within MPMX26_01120at 1189.508 kb on + strand, within MPMX26_01120at 1189.513 kb on + strand, within MPMX26_01120at 1189.591 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.642 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.678 kb on + strandat 1189.678 kb on + strandat 1189.683 kb on + strandat 1189.683 kb on + strandat 1189.683 kb on + strandat 1189.715 kb on + strandat 1189.715 kb on + strandat 1189.773 kb on + strandat 1189.773 kb on + strandat 1189.776 kb on + strandat 1189.783 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.894 kb on + strand, within MPMX26_01121at 1189.894 kb on + strand, within MPMX26_01121at 1189.894 kb on + strand, within MPMX26_01121at 1189.904 kb on + strand, within MPMX26_01121at 1189.904 kb on + strand, within MPMX26_01121at 1189.904 kb on + strand, within MPMX26_01121at 1189.953 kb on + strand, within MPMX26_01121at 1189.953 kb on + strand, within MPMX26_01121at 1189.953 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1190.048 kb on + strand, within MPMX26_01121at 1190.059 kb on + strand, within MPMX26_01121at 1190.070 kb on + strand, within MPMX26_01121at 1190.077 kb on + strand, within MPMX26_01121at 1190.079 kb on + strand, within MPMX26_01121at 1190.079 kb on + strand, within MPMX26_01121at 1190.089 kb on + strand, within MPMX26_01121at 1190.089 kb on + strand, within MPMX26_01121at 1190.095 kb on + strand, within MPMX26_01121at 1190.095 kb on + strand, within MPMX26_01121at 1190.096 kb on + strand, within MPMX26_01121at 1190.115 kb on + strand, within MPMX26_01121at 1190.116 kb on + strand, within MPMX26_01121at 1190.117 kb on + strand, within MPMX26_01121at 1190.131 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.146 kb on + strand, within MPMX26_01121at 1190.226 kb on + strand, within MPMX26_01121at 1190.228 kb on + strand, within MPMX26_01121at 1190.279 kb on + strandat 1190.291 kb on + strandat 1190.344 kb on + strandat 1190.398 kb on + strandat 1190.560 kb on + strand, within MPMX26_01122at 1190.570 kb on + strand, within MPMX26_01122at 1190.633 kb on + strand, within MPMX26_01122at 1190.639 kb on + strand, within MPMX26_01122at 1190.639 kb on + strand, within MPMX26_01122at 1190.639 kb on + strand, within MPMX26_01122at 1190.666 kb on + strand, within MPMX26_01122at 1190.691 kb on + strand, within MPMX26_01122at 1190.691 kb on + strand, within MPMX26_01122at 1190.691 kb on + strand, within MPMX26_01122at 1190.761 kb on + strand, within MPMX26_01122at 1190.780 kb on + strand, within MPMX26_01122at 1190.780 kb on + strand, within MPMX26_01122at 1190.792 kb on + strand, within MPMX26_01122at 1190.812 kb on + strand, within MPMX26_01122at 1190.812 kb on + strand, within MPMX26_01122at 1190.812 kb on + strand, within MPMX26_01122at 1190.812 kb on + strand, within MPMX26_01122at 1190.813 kb on + strand, within MPMX26_01122at 1190.835 kb on + strand, within MPMX26_01122at 1190.835 kb on + strand, within MPMX26_01122at 1190.835 kb on + strand, within MPMX26_01122at 1190.835 kb on + strand, within MPMX26_01122at 1190.835 kb on + strand, within MPMX26_01122at 1190.835 kb on + strand, within MPMX26_01122at 1190.852 kb on + strand, within MPMX26_01122at 1190.852 kb on + strand, within MPMX26_01122at 1190.852 kb on + strand, within MPMX26_01122at 1190.881 kb on + strand, within MPMX26_01122at 1190.906 kb on + strand, within MPMX26_01122at 1190.941 kb on + strand, within MPMX26_01122at 1190.953 kb on + strand, within MPMX26_01122at 1190.953 kb on + strand, within MPMX26_01122at 1191.014 kb on + strand, within MPMX26_01122at 1191.014 kb on + strand, within MPMX26_01122at 1191.014 kb on + strand, within MPMX26_01122at 1191.014 kb on + strand, within MPMX26_01122at 1191.044 kb on + strand, within MPMX26_01122at 1191.057 kb on + strand, within MPMX26_01122at 1191.137 kb on + strand, within MPMX26_01122at 1191.159 kb on + strand, within MPMX26_01122at 1191.253 kb on + strand, within MPMX26_01122at 1191.261 kb on + strand, within MPMX26_01122at 1191.274 kb on + strand, within MPMX26_01122at 1191.301 kb on + strand, within MPMX26_01122at 1191.352 kb on + strand, within MPMX26_01122at 1191.361 kb on + strand, within MPMX26_01122at 1191.442 kb on + strand, within MPMX26_01122at 1191.464 kb on + strand, within MPMX26_01122at 1191.464 kb on + strand, within MPMX26_01122at 1191.531 kb on + strand, within MPMX26_01122at 1191.584 kb on + strand, within MPMX26_01122at 1191.594 kb on + strand, within MPMX26_01122at 1191.672 kb on + strand, within MPMX26_01122at 1191.672 kb on + strand, within MPMX26_01122at 1191.685 kb on + strand, within MPMX26_01122at 1191.730 kb on + strand, within MPMX26_01122at 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.754 kb on + strandat 1191.862 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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1,189,446 + MPMX26_01120 0.71 -2.2
1,189,462 + MPMX26_01120 0.73 -0.6
1,189,462 + MPMX26_01120 0.73 -1.0
1,189,485 + MPMX26_01120 0.75 -1.5
1,189,486 + MPMX26_01120 0.75 -1.0
1,189,486 + MPMX26_01120 0.75 -0.6
1,189,486 + MPMX26_01120 0.75 -0.3
1,189,486 + MPMX26_01120 0.75 -1.0
1,189,486 + MPMX26_01120 0.75 -0.8
1,189,496 + MPMX26_01120 0.76 -0.8
1,189,496 + MPMX26_01120 0.76 -1.3
1,189,496 + MPMX26_01120 0.76 -0.6
1,189,496 + MPMX26_01120 0.76 -0.8
1,189,496 + MPMX26_01120 0.76 -0.0
1,189,496 + MPMX26_01120 0.76 -1.3
1,189,496 + MPMX26_01120 0.76 -1.3
1,189,496 + MPMX26_01120 0.76 -0.6
1,189,501 + MPMX26_01120 0.77 -1.0
1,189,501 + MPMX26_01120 0.77 -0.3
1,189,508 + MPMX26_01120 0.77 -0.6
1,189,513 + MPMX26_01120 0.78 -1.6
1,189,591 + MPMX26_01120 0.86 -0.6
1,189,596 + MPMX26_01120 0.86 -0.3
1,189,596 + MPMX26_01120 0.86 -0.3
1,189,596 + MPMX26_01120 0.86 -1.3
1,189,596 + MPMX26_01120 0.86 -2.9
1,189,642 + -0.3
1,189,668 + -0.6
1,189,668 + -0.6
1,189,668 + +0.4
1,189,668 + -1.5
1,189,668 + -1.2
1,189,678 + -0.6
1,189,678 + -0.3
1,189,683 + -0.6
1,189,683 + -0.3
1,189,683 + -1.0
1,189,715 + +0.2
1,189,715 + -0.2
1,189,773 + +0.3
1,189,773 + +0.3
1,189,776 + -0.3
1,189,783 + +0.2
1,189,785 + -1.2
1,189,785 + +0.5
1,189,785 + -0.4
1,189,785 + -0.8
1,189,785 + -0.2
1,189,785 + -1.2
1,189,785 + -0.7
1,189,785 + -0.3
1,189,894 + MPMX26_01121 0.27 -0.5
1,189,894 + MPMX26_01121 0.27 -0.1
1,189,894 + MPMX26_01121 0.27 -0.7
1,189,904 + MPMX26_01121 0.28 -0.0
1,189,904 + MPMX26_01121 0.28 -0.5
1,189,904 + MPMX26_01121 0.28 -1.3
1,189,953 + MPMX26_01121 0.37 +0.1
1,189,953 + MPMX26_01121 0.37 -0.4
1,189,953 + MPMX26_01121 0.37 -0.2
1,189,968 + MPMX26_01121 0.39 -0.4
1,189,968 + MPMX26_01121 0.39 -0.2
1,189,968 + MPMX26_01121 0.39 -0.2
1,189,968 + MPMX26_01121 0.39 -0.6
1,189,968 + MPMX26_01121 0.39 +0.3
1,189,968 + MPMX26_01121 0.39 -0.3
1,190,048 + MPMX26_01121 0.53 -0.2
1,190,059 + MPMX26_01121 0.55 +0.2
1,190,070 + MPMX26_01121 0.56 +0.2
1,190,077 + MPMX26_01121 0.58 -0.1
1,190,079 + MPMX26_01121 0.58 +0.3
1,190,079 + MPMX26_01121 0.58 +0.5
1,190,089 + MPMX26_01121 0.60 -0.3
1,190,089 + MPMX26_01121 0.60 -0.1
1,190,095 + MPMX26_01121 0.61 +0.1
1,190,095 + MPMX26_01121 0.61 -0.2
1,190,096 + MPMX26_01121 0.61 -1.7
1,190,115 + MPMX26_01121 0.64 -0.8
1,190,116 + MPMX26_01121 0.64 -0.5
1,190,117 + MPMX26_01121 0.64 +0.0
1,190,131 + MPMX26_01121 0.67 +0.7
1,190,136 + MPMX26_01121 0.68 +0.1
1,190,136 + MPMX26_01121 0.68 -0.0
1,190,136 + MPMX26_01121 0.68 -0.3
1,190,136 + MPMX26_01121 0.68 +0.1
1,190,136 + MPMX26_01121 0.68 -0.3
1,190,136 + MPMX26_01121 0.68 -0.5
1,190,136 + MPMX26_01121 0.68 -0.6
1,190,146 + MPMX26_01121 0.69 -0.2
1,190,226 + MPMX26_01121 0.83 +0.2
1,190,228 + MPMX26_01121 0.83 -0.1
1,190,279 + +0.6
1,190,291 + -0.6
1,190,344 + -1.8
1,190,398 + -4.1
1,190,560 + MPMX26_01122 0.14 -5.0
1,190,570 + MPMX26_01122 0.14 -2.5
1,190,633 + MPMX26_01122 0.18 -2.7
1,190,639 + MPMX26_01122 0.19 -4.8
1,190,639 + MPMX26_01122 0.19 -3.6
1,190,639 + MPMX26_01122 0.19 -3.0
1,190,666 + MPMX26_01122 0.21 -2.5
1,190,691 + MPMX26_01122 0.22 -3.9
1,190,691 + MPMX26_01122 0.22 -3.6
1,190,691 + MPMX26_01122 0.22 -3.1
1,190,761 + MPMX26_01122 0.27 -4.2
1,190,780 + MPMX26_01122 0.28 -3.7
1,190,780 + MPMX26_01122 0.28 -3.9
1,190,792 + MPMX26_01122 0.29 -2.9
1,190,812 + MPMX26_01122 0.30 -4.2
1,190,812 + MPMX26_01122 0.30 -4.1
1,190,812 + MPMX26_01122 0.30 -2.5
1,190,812 + MPMX26_01122 0.30 -4.3
1,190,813 + MPMX26_01122 0.30 -4.4
1,190,835 + MPMX26_01122 0.32 -2.9
1,190,835 + MPMX26_01122 0.32 -4.3
1,190,835 + MPMX26_01122 0.32 -4.5
1,190,835 + MPMX26_01122 0.32 -4.0
1,190,835 + MPMX26_01122 0.32 -3.9
1,190,835 + MPMX26_01122 0.32 -4.3
1,190,852 + MPMX26_01122 0.33 -4.2
1,190,852 + MPMX26_01122 0.33 -3.3
1,190,852 + MPMX26_01122 0.33 -3.5
1,190,881 + MPMX26_01122 0.35 -2.5
1,190,906 + MPMX26_01122 0.36 -4.8
1,190,941 + MPMX26_01122 0.38 -4.4
1,190,953 + MPMX26_01122 0.39 -5.5
1,190,953 + MPMX26_01122 0.39 -2.9
1,191,014 + MPMX26_01122 0.43 -4.2
1,191,014 + MPMX26_01122 0.43 -3.5
1,191,014 + MPMX26_01122 0.43 -3.8
1,191,014 + MPMX26_01122 0.43 -4.1
1,191,044 + MPMX26_01122 0.45 -3.8
1,191,057 + MPMX26_01122 0.46 -3.8
1,191,137 + MPMX26_01122 0.51 -4.3
1,191,159 + MPMX26_01122 0.53 -4.3
1,191,253 + MPMX26_01122 0.59 -3.4
1,191,261 + MPMX26_01122 0.59 -2.2
1,191,274 + MPMX26_01122 0.60 -3.8
1,191,301 + MPMX26_01122 0.62 -3.3
1,191,352 + MPMX26_01122 0.65 -4.4
1,191,361 + MPMX26_01122 0.66 -3.4
1,191,442 + MPMX26_01122 0.71 -4.2
1,191,464 + MPMX26_01122 0.72 -3.5
1,191,464 + MPMX26_01122 0.72 -4.0
1,191,531 + MPMX26_01122 0.77 -3.3
1,191,584 + MPMX26_01122 0.80 -3.0
1,191,594 + MPMX26_01122 0.81 -4.1
1,191,672 + MPMX26_01122 0.86 -4.6
1,191,672 + MPMX26_01122 0.86 -4.7
1,191,685 + MPMX26_01122 0.87 -1.3
1,191,730 + MPMX26_01122 0.90 -5.4
1,191,740 + -3.8
1,191,740 + -3.3
1,191,740 + -3.5
1,191,740 + -4.4
1,191,740 + -3.8
1,191,740 + -4.7
1,191,754 + -1.7
1,191,862 + -1.1

Or see this region's nucleotide sequence