Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01120 and MPMX26_01121 are separated by 3 nucleotides MPMX26_01121 and MPMX26_01122 are separated by 24 nucleotides MPMX26_01122 and MPMX26_01123 are separated by 80 nucleotides
MPMX26_01120: MPMX26_01120 - Dihydroorotate dehydrogenase (quinone), at 1,188,730 to 1,189,734
_01120
MPMX26_01121: MPMX26_01121 - hypothetical protein, at 1,189,738 to 1,190,325
_01121
MPMX26_01122: MPMX26_01122 - Amidophosphoribosyltransferase, at 1,190,350 to 1,191,888
_01122
MPMX26_01123: MPMX26_01123 - Protease HtpX, at 1,191,969 to 1,193,858
_01123
Position (kb)
1190
1191
1192 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1189.446 kb on + strand, within MPMX26_01120 at 1189.462 kb on + strand, within MPMX26_01120 at 1189.462 kb on + strand, within MPMX26_01120 at 1189.485 kb on + strand, within MPMX26_01120 at 1189.486 kb on + strand, within MPMX26_01120 at 1189.486 kb on + strand, within MPMX26_01120 at 1189.486 kb on + strand, within MPMX26_01120 at 1189.486 kb on + strand, within MPMX26_01120 at 1189.486 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.496 kb on + strand, within MPMX26_01120 at 1189.501 kb on + strand, within MPMX26_01120 at 1189.501 kb on + strand, within MPMX26_01120 at 1189.508 kb on + strand, within MPMX26_01120 at 1189.513 kb on + strand, within MPMX26_01120 at 1189.591 kb on + strand, within MPMX26_01120 at 1189.596 kb on + strand, within MPMX26_01120 at 1189.596 kb on + strand, within MPMX26_01120 at 1189.596 kb on + strand, within MPMX26_01120 at 1189.596 kb on + strand, within MPMX26_01120 at 1189.642 kb on + strand at 1189.668 kb on + strand at 1189.668 kb on + strand at 1189.668 kb on + strand at 1189.668 kb on + strand at 1189.668 kb on + strand at 1189.678 kb on + strand at 1189.678 kb on + strand at 1189.683 kb on + strand at 1189.683 kb on + strand at 1189.683 kb on + strand at 1189.715 kb on + strand at 1189.715 kb on + strand at 1189.773 kb on + strand at 1189.773 kb on + strand at 1189.776 kb on + strand at 1189.783 kb on + strand at 1189.785 kb on + strand at 1189.785 kb on + strand at 1189.785 kb on + strand at 1189.785 kb on + strand at 1189.785 kb on + strand at 1189.785 kb on + strand at 1189.785 kb on + strand at 1189.785 kb on + strand at 1189.894 kb on + strand, within MPMX26_01121 at 1189.894 kb on + strand, within MPMX26_01121 at 1189.894 kb on + strand, within MPMX26_01121 at 1189.904 kb on + strand, within MPMX26_01121 at 1189.904 kb on + strand, within MPMX26_01121 at 1189.904 kb on + strand, within MPMX26_01121 at 1189.953 kb on + strand, within MPMX26_01121 at 1189.953 kb on + strand, within MPMX26_01121 at 1189.953 kb on + strand, within MPMX26_01121 at 1189.968 kb on + strand, within MPMX26_01121 at 1189.968 kb on + strand, within MPMX26_01121 at 1189.968 kb on + strand, within MPMX26_01121 at 1189.968 kb on + strand, within MPMX26_01121 at 1189.968 kb on + strand, within MPMX26_01121 at 1189.968 kb on + strand, within MPMX26_01121 at 1190.048 kb on + strand, within MPMX26_01121 at 1190.059 kb on + strand, within MPMX26_01121 at 1190.070 kb on + strand, within MPMX26_01121 at 1190.077 kb on + strand, within MPMX26_01121 at 1190.079 kb on + strand, within MPMX26_01121 at 1190.079 kb on + strand, within MPMX26_01121 at 1190.089 kb on + strand, within MPMX26_01121 at 1190.089 kb on + strand, within MPMX26_01121 at 1190.095 kb on + strand, within MPMX26_01121 at 1190.095 kb on + strand, within MPMX26_01121 at 1190.096 kb on + strand, within MPMX26_01121 at 1190.115 kb on + strand, within MPMX26_01121 at 1190.116 kb on + strand, within MPMX26_01121 at 1190.117 kb on + strand, within MPMX26_01121 at 1190.131 kb on + strand, within MPMX26_01121 at 1190.136 kb on + strand, within MPMX26_01121 at 1190.136 kb on + strand, within MPMX26_01121 at 1190.136 kb on + strand, within MPMX26_01121 at 1190.136 kb on + strand, within MPMX26_01121 at 1190.136 kb on + strand, within MPMX26_01121 at 1190.136 kb on + strand, within MPMX26_01121 at 1190.136 kb on + strand, within MPMX26_01121 at 1190.146 kb on + strand, within MPMX26_01121 at 1190.226 kb on + strand, within MPMX26_01121 at 1190.228 kb on + strand, within MPMX26_01121 at 1190.279 kb on + strand at 1190.291 kb on + strand at 1190.344 kb on + strand at 1190.398 kb on + strand at 1190.560 kb on + strand, within MPMX26_01122 at 1190.570 kb on + strand, within MPMX26_01122 at 1190.633 kb on + strand, within MPMX26_01122 at 1190.639 kb on + strand, within MPMX26_01122 at 1190.639 kb on + strand, within MPMX26_01122 at 1190.639 kb on + strand, within MPMX26_01122 at 1190.666 kb on + strand, within MPMX26_01122 at 1190.691 kb on + strand, within MPMX26_01122 at 1190.691 kb on + strand, within MPMX26_01122 at 1190.691 kb on + strand, within MPMX26_01122 at 1190.761 kb on + strand, within MPMX26_01122 at 1190.780 kb on + strand, within MPMX26_01122 at 1190.780 kb on + strand, within MPMX26_01122 at 1190.792 kb on + strand, within MPMX26_01122 at 1190.812 kb on + strand, within MPMX26_01122 at 1190.812 kb on + strand, within MPMX26_01122 at 1190.812 kb on + strand, within MPMX26_01122 at 1190.812 kb on + strand, within MPMX26_01122 at 1190.813 kb on + strand, within MPMX26_01122 at 1190.835 kb on + strand, within MPMX26_01122 at 1190.835 kb on + strand, within MPMX26_01122 at 1190.835 kb on + strand, within MPMX26_01122 at 1190.835 kb on + strand, within MPMX26_01122 at 1190.835 kb on + strand, within MPMX26_01122 at 1190.835 kb on + strand, within MPMX26_01122 at 1190.852 kb on + strand, within MPMX26_01122 at 1190.852 kb on + strand, within MPMX26_01122 at 1190.852 kb on + strand, within MPMX26_01122 at 1190.881 kb on + strand, within MPMX26_01122 at 1190.906 kb on + strand, within MPMX26_01122 at 1190.941 kb on + strand, within MPMX26_01122 at 1190.953 kb on + strand, within MPMX26_01122 at 1190.953 kb on + strand, within MPMX26_01122 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.044 kb on + strand, within MPMX26_01122 at 1191.057 kb on + strand, within MPMX26_01122 at 1191.137 kb on + strand, within MPMX26_01122 at 1191.159 kb on + strand, within MPMX26_01122 at 1191.253 kb on + strand, within MPMX26_01122 at 1191.261 kb on + strand, within MPMX26_01122 at 1191.274 kb on + strand, within MPMX26_01122 at 1191.301 kb on + strand, within MPMX26_01122 at 1191.352 kb on + strand, within MPMX26_01122 at 1191.361 kb on + strand, within MPMX26_01122 at 1191.442 kb on + strand, within MPMX26_01122 at 1191.464 kb on + strand, within MPMX26_01122 at 1191.464 kb on + strand, within MPMX26_01122 at 1191.531 kb on + strand, within MPMX26_01122 at 1191.584 kb on + strand, within MPMX26_01122 at 1191.594 kb on + strand, within MPMX26_01122 at 1191.672 kb on + strand, within MPMX26_01122 at 1191.672 kb on + strand, within MPMX26_01122 at 1191.685 kb on + strand, within MPMX26_01122 at 1191.730 kb on + strand, within MPMX26_01122 at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.754 kb on + strand at 1191.862 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 1,189,446 + MPMX26_01120 0.71 -2.2 1,189,462 + MPMX26_01120 0.73 -0.6 1,189,462 + MPMX26_01120 0.73 -1.0 1,189,485 + MPMX26_01120 0.75 -1.5 1,189,486 + MPMX26_01120 0.75 -1.0 1,189,486 + MPMX26_01120 0.75 -0.6 1,189,486 + MPMX26_01120 0.75 -0.3 1,189,486 + MPMX26_01120 0.75 -1.0 1,189,486 + MPMX26_01120 0.75 -0.8 1,189,496 + MPMX26_01120 0.76 -0.8 1,189,496 + MPMX26_01120 0.76 -1.3 1,189,496 + MPMX26_01120 0.76 -0.6 1,189,496 + MPMX26_01120 0.76 -0.8 1,189,496 + MPMX26_01120 0.76 -0.0 1,189,496 + MPMX26_01120 0.76 -1.3 1,189,496 + MPMX26_01120 0.76 -1.3 1,189,496 + MPMX26_01120 0.76 -0.6 1,189,501 + MPMX26_01120 0.77 -1.0 1,189,501 + MPMX26_01120 0.77 -0.3 1,189,508 + MPMX26_01120 0.77 -0.6 1,189,513 + MPMX26_01120 0.78 -1.6 1,189,591 + MPMX26_01120 0.86 -0.6 1,189,596 + MPMX26_01120 0.86 -0.3 1,189,596 + MPMX26_01120 0.86 -0.3 1,189,596 + MPMX26_01120 0.86 -1.3 1,189,596 + MPMX26_01120 0.86 -2.9 1,189,642 + -0.3 1,189,668 + -0.6 1,189,668 + -0.6 1,189,668 + +0.4 1,189,668 + -1.5 1,189,668 + -1.2 1,189,678 + -0.6 1,189,678 + -0.3 1,189,683 + -0.6 1,189,683 + -0.3 1,189,683 + -1.0 1,189,715 + +0.2 1,189,715 + -0.2 1,189,773 + +0.3 1,189,773 + +0.3 1,189,776 + -0.3 1,189,783 + +0.2 1,189,785 + -1.2 1,189,785 + +0.5 1,189,785 + -0.4 1,189,785 + -0.8 1,189,785 + -0.2 1,189,785 + -1.2 1,189,785 + -0.7 1,189,785 + -0.3 1,189,894 + MPMX26_01121 0.27 -0.5 1,189,894 + MPMX26_01121 0.27 -0.1 1,189,894 + MPMX26_01121 0.27 -0.7 1,189,904 + MPMX26_01121 0.28 -0.0 1,189,904 + MPMX26_01121 0.28 -0.5 1,189,904 + MPMX26_01121 0.28 -1.3 1,189,953 + MPMX26_01121 0.37 +0.1 1,189,953 + MPMX26_01121 0.37 -0.4 1,189,953 + MPMX26_01121 0.37 -0.2 1,189,968 + MPMX26_01121 0.39 -0.4 1,189,968 + MPMX26_01121 0.39 -0.2 1,189,968 + MPMX26_01121 0.39 -0.2 1,189,968 + MPMX26_01121 0.39 -0.6 1,189,968 + MPMX26_01121 0.39 +0.3 1,189,968 + MPMX26_01121 0.39 -0.3 1,190,048 + MPMX26_01121 0.53 -0.2 1,190,059 + MPMX26_01121 0.55 +0.2 1,190,070 + MPMX26_01121 0.56 +0.2 1,190,077 + MPMX26_01121 0.58 -0.1 1,190,079 + MPMX26_01121 0.58 +0.3 1,190,079 + MPMX26_01121 0.58 +0.5 1,190,089 + MPMX26_01121 0.60 -0.3 1,190,089 + MPMX26_01121 0.60 -0.1 1,190,095 + MPMX26_01121 0.61 +0.1 1,190,095 + MPMX26_01121 0.61 -0.2 1,190,096 + MPMX26_01121 0.61 -1.7 1,190,115 + MPMX26_01121 0.64 -0.8 1,190,116 + MPMX26_01121 0.64 -0.5 1,190,117 + MPMX26_01121 0.64 +0.0 1,190,131 + MPMX26_01121 0.67 +0.7 1,190,136 + MPMX26_01121 0.68 +0.1 1,190,136 + MPMX26_01121 0.68 -0.0 1,190,136 + MPMX26_01121 0.68 -0.3 1,190,136 + MPMX26_01121 0.68 +0.1 1,190,136 + MPMX26_01121 0.68 -0.3 1,190,136 + MPMX26_01121 0.68 -0.5 1,190,136 + MPMX26_01121 0.68 -0.6 1,190,146 + MPMX26_01121 0.69 -0.2 1,190,226 + MPMX26_01121 0.83 +0.2 1,190,228 + MPMX26_01121 0.83 -0.1 1,190,279 + +0.6 1,190,291 + -0.6 1,190,344 + -1.8 1,190,398 + -4.1 1,190,560 + MPMX26_01122 0.14 -5.0 1,190,570 + MPMX26_01122 0.14 -2.5 1,190,633 + MPMX26_01122 0.18 -2.7 1,190,639 + MPMX26_01122 0.19 -4.8 1,190,639 + MPMX26_01122 0.19 -3.6 1,190,639 + MPMX26_01122 0.19 -3.0 1,190,666 + MPMX26_01122 0.21 -2.5 1,190,691 + MPMX26_01122 0.22 -3.9 1,190,691 + MPMX26_01122 0.22 -3.6 1,190,691 + MPMX26_01122 0.22 -3.1 1,190,761 + MPMX26_01122 0.27 -4.2 1,190,780 + MPMX26_01122 0.28 -3.7 1,190,780 + MPMX26_01122 0.28 -3.9 1,190,792 + MPMX26_01122 0.29 -2.9 1,190,812 + MPMX26_01122 0.30 -4.2 1,190,812 + MPMX26_01122 0.30 -4.1 1,190,812 + MPMX26_01122 0.30 -2.5 1,190,812 + MPMX26_01122 0.30 -4.3 1,190,813 + MPMX26_01122 0.30 -4.4 1,190,835 + MPMX26_01122 0.32 -2.9 1,190,835 + MPMX26_01122 0.32 -4.3 1,190,835 + MPMX26_01122 0.32 -4.5 1,190,835 + MPMX26_01122 0.32 -4.0 1,190,835 + MPMX26_01122 0.32 -3.9 1,190,835 + MPMX26_01122 0.32 -4.3 1,190,852 + MPMX26_01122 0.33 -4.2 1,190,852 + MPMX26_01122 0.33 -3.3 1,190,852 + MPMX26_01122 0.33 -3.5 1,190,881 + MPMX26_01122 0.35 -2.5 1,190,906 + MPMX26_01122 0.36 -4.8 1,190,941 + MPMX26_01122 0.38 -4.4 1,190,953 + MPMX26_01122 0.39 -5.5 1,190,953 + MPMX26_01122 0.39 -2.9 1,191,014 + MPMX26_01122 0.43 -4.2 1,191,014 + MPMX26_01122 0.43 -3.5 1,191,014 + MPMX26_01122 0.43 -3.8 1,191,014 + MPMX26_01122 0.43 -4.1 1,191,044 + MPMX26_01122 0.45 -3.8 1,191,057 + MPMX26_01122 0.46 -3.8 1,191,137 + MPMX26_01122 0.51 -4.3 1,191,159 + MPMX26_01122 0.53 -4.3 1,191,253 + MPMX26_01122 0.59 -3.4 1,191,261 + MPMX26_01122 0.59 -2.2 1,191,274 + MPMX26_01122 0.60 -3.8 1,191,301 + MPMX26_01122 0.62 -3.3 1,191,352 + MPMX26_01122 0.65 -4.4 1,191,361 + MPMX26_01122 0.66 -3.4 1,191,442 + MPMX26_01122 0.71 -4.2 1,191,464 + MPMX26_01122 0.72 -3.5 1,191,464 + MPMX26_01122 0.72 -4.0 1,191,531 + MPMX26_01122 0.77 -3.3 1,191,584 + MPMX26_01122 0.80 -3.0 1,191,594 + MPMX26_01122 0.81 -4.1 1,191,672 + MPMX26_01122 0.86 -4.6 1,191,672 + MPMX26_01122 0.86 -4.7 1,191,685 + MPMX26_01122 0.87 -1.3 1,191,730 + MPMX26_01122 0.90 -5.4 1,191,740 + -3.8 1,191,740 + -3.3 1,191,740 + -3.5 1,191,740 + -4.4 1,191,740 + -3.8 1,191,740 + -4.7 1,191,754 + -1.7 1,191,862 + -1.1
Or see this region's nucleotide sequence