Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5538

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,542,515	-				+0.0
2,542,515	-				-0.3
2,542,555	-				+0.1
2,542,877	-		GFF5537	0.36	-0.2
2,542,877	-		GFF5537	0.36	-1.8
2,542,888	+		GFF5537	0.37	-0.0
2,542,888	+		GFF5537	0.37	-0.1
2,542,912	+		GFF5537	0.40	+0.8
2,543,122	+		GFF5537	0.64	-0.3
2,543,122	+		GFF5537	0.64	-0.6
2,543,122	+		GFF5537	0.64	+0.1
2,543,123	-		GFF5537	0.64	-0.3
2,543,123	-		GFF5537	0.64	+0.1
2,543,123	-		GFF5537	0.64	-1.9
2,543,198	-		GFF5537	0.73	+0.1
2,543,198	-		GFF5537	0.73	+1.4
2,543,198	-		GFF5537	0.73	+0.2
2,543,347	+				-0.2
2,543,347	+				-0.4
2,543,348	-				+0.2
2,543,348	-				+0.2
2,543,438	+				+0.1
2,543,466	+				-2.0
2,543,499	-		GFF5538	0.19	+0.8
2,543,658	+				-0.5
2,543,679	+				+0.7
2,543,995	+				+0.1
2,544,046	+				+0.0
2,544,046	+				-0.0
2,544,046	+				+0.6
2,544,047	-				-0.2
2,544,069	+				-0.7
2,544,069	+				+0.4
2,544,070	-				+0.3
2,544,070	-				+0.1
2,544,350	-				-0.0
2,544,506	-				-0.1
2,544,522	+				+0.0