Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5417

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,419,450	+		GFF5417	0.47	+0.8
2,420,176	+		GFF5418	0.36	+0.0
2,420,413	+		GFF5418	0.64	+0.1
2,420,413	+		GFF5418	0.64	-0.2
2,420,414	-		GFF5418	0.64	+0.2
2,420,414	-		GFF5418	0.64	-0.2
2,420,482	+		GFF5418	0.72	-0.8
2,420,482	+		GFF5418	0.72	-1.1
2,420,491	+		GFF5418	0.73	-0.5
2,420,500	+		GFF5418	0.74	+0.7