Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF533

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
201,342	+		GFF532	0.61	-0.3
201,342	+		GFF532	0.61	+0.5
201,343	-		GFF532	0.61	+0.1
201,369	+		GFF532	0.63	+0.6
201,369	+		GFF532	0.63	+0.4
201,369	+		GFF532	0.63	+0.2
201,369	+		GFF532	0.63	+0.5
201,369	+		GFF532	0.63	+0.8
201,370	-		GFF532	0.63	+0.4
201,370	-		GFF532	0.63	-0.4
201,370	-		GFF532	0.63	+0.5
201,370	-		GFF532	0.63	+0.4
201,522	+		GFF532	0.75	+0.2
201,732	+				-0.9
201,732	+				+0.9
201,789	+				+0.3
201,790	-				-0.2
201,790	-				+0.1
201,790	-				-0.8
201,820	-				-1.3
201,820	-				+0.1
201,820	-				-0.3
201,823	-				-0.3
202,241	-		GFF533	0.82	+0.5
202,241	-		GFF533	0.82	+0.0
202,379	+				-0.1
202,379	+				+0.4
202,380	-				+0.3
202,380	-				-0.1
202,631	+		GFF534	0.31	-0.8
202,631	+		GFF534	0.31	+0.3
202,817	+		GFF534	0.50	+1.5
202,818	-		GFF534	0.50	+0.1
202,818	-		GFF534	0.50	+0.5
202,818	-		GFF534	0.50	-0.4
202,818	-		GFF534	0.50	-0.1
202,862	+		GFF534	0.55	+0.5
202,862	+		GFF534	0.55	-0.1
202,863	-		GFF534	0.55	-0.6
202,863	-		GFF534	0.55	+0.1