Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5246

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
2,261,069	-		GFF5245	0.26	+0.1
2,261,295	+		GFF5245	0.43	-0.2
2,261,296	-		GFF5245	0.43	+0.1
2,261,305	+		GFF5245	0.44	+0.5
2,261,306	-		GFF5245	0.44	+0.5
2,261,306	-		GFF5245	0.44	-0.4
2,261,461	+		GFF5245	0.56	-0.3
2,261,461	+		GFF5245	0.56	+0.1
2,262,048	+				-0.4
2,262,048	+				-0.5
2,262,048	+				+0.5
2,262,049	-				+0.1
2,262,049	-				-0.1
2,262,075	+				+0.0
2,262,076	-				-0.3
2,262,549	+		GFF5246	0.62	+0.8
2,262,550	-		GFF5246	0.62	+0.1
2,262,884	+				-0.6
2,263,190	-				+0.1
2,263,367	+		GFF5248	0.15	-1.7
2,263,367	+		GFF5248	0.15	-0.9
2,263,367	+		GFF5248	0.15	-1.7
2,263,454	+		GFF5248	0.21	+0.4
2,263,508	+		GFF5248	0.25	-0.4