Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4856

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,861,510	+		GFF4855	0.11	-0.7
1,861,510	+		GFF4855	0.11	-2.2
1,861,510	+		GFF4855	0.11	-0.4
1,861,510	+		GFF4855	0.11	-1.6
1,861,511	-		GFF4855	0.11	-0.2
1,861,624	+		GFF4855	0.24	-0.4
1,861,625	-		GFF4855	0.24	-0.3
1,861,748	-		GFF4855	0.38	+0.2
1,861,748	-		GFF4855	0.38	-1.6
1,862,002	+		GFF4855	0.66	+0.2
1,862,002	+		GFF4855	0.66	-0.0
1,862,002	+		GFF4855	0.66	-2.6
1,862,002	+		GFF4855	0.66	-1.0
1,862,003	-		GFF4855	0.66	-1.7
1,862,003	-		GFF4855	0.66	-0.0
1,862,003	-		GFF4855	0.66	-0.7
1,862,036	-		GFF4855	0.70	-0.1
1,862,036	-		GFF4855	0.70	+0.3
1,862,123	-		GFF4855	0.80	+0.8
1,862,123	-		GFF4855	0.80	+1.4
1,862,481	+		GFF4856	0.12	-0.2
1,862,481	+		GFF4856	0.12	+0.1
1,862,481	+		GFF4856	0.12	+0.1
1,862,481	+		GFF4856	0.12	+0.4
1,862,481	+		GFF4856	0.12	-0.6
1,862,535	+		GFF4856	0.16	+0.0
1,862,535	+		GFF4856	0.16	+0.4
1,862,536	-		GFF4856	0.16	-0.6
1,862,536	-		GFF4856	0.16	-1.2
1,862,536	-		GFF4856	0.16	+0.2
1,862,536	-		GFF4856	0.16	-1.1
1,862,536	-		GFF4856	0.16	+1.2
1,862,559	+		GFF4856	0.18	-0.6
1,862,559	+		GFF4856	0.18	+0.4
1,862,559	+		GFF4856	0.18	-0.7
1,862,560	-		GFF4856	0.18	-0.6
1,862,560	-		GFF4856	0.18	-1.2
1,862,595	+		GFF4856	0.20	+0.0
1,862,865	+		GFF4856	0.41	-0.4
1,862,865	+		GFF4856	0.41	+0.4
1,862,866	-		GFF4856	0.41	+0.4
1,862,866	-		GFF4856	0.41	+0.2
1,863,051	+		GFF4856	0.56	+0.3
1,863,051	+		GFF4856	0.56	-1.3
1,863,244	-		GFF4856	0.70	-1.3
1,863,244	-		GFF4856	0.70	-0.9
1,863,244	-		GFF4856	0.70	-1.4
1,863,695	+				-0.3
1,863,696	-				+0.2
1,863,696	-				-0.0
1,864,201	+		GFF4857	0.40	+1.4
1,864,201	+		GFF4857	0.40	+0.4
1,864,201	+		GFF4857	0.40	+0.1
1,864,202	-		GFF4857	0.40	-0.0
1,864,202	-		GFF4857	0.40	+1.2
1,864,307	-		GFF4857	0.50	-0.6
1,864,531	+		GFF4857	0.70	-0.2
1,864,531	+		GFF4857	0.70	+0.1
1,864,531	+		GFF4857	0.70	+1.4
1,864,532	-		GFF4857	0.70	-0.3