Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4441

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,370,941	-		GFF4440	0.46	+1.7
1,371,744	-				+0.1
1,371,897	-		GFF4441	0.30	+0.5
1,371,956	+		GFF4441	0.38	+0.2
1,371,957	-		GFF4441	0.38	+1.1
1,372,070	+		GFF4441	0.54	+0.4
1,372,071	-		GFF4441	0.55	+0.2
1,372,332	-				+0.5
1,372,732	+		GFF4442	0.35	+0.1
1,372,732	+		GFF4442	0.35	-0.2
1,372,907	+		GFF4442	0.53	+1.5
1,372,933	+		GFF4442	0.56	-0.2
1,372,933	+		GFF4442	0.56	+0.3
1,372,934	-		GFF4442	0.56	-0.2
1,372,934	-		GFF4442	0.56	-0.4
1,373,158	+		GFF4442	0.79	+0.2
1,373,158	+		GFF4442	0.79	+0.4
1,373,158	+		GFF4442	0.79	+0.5
1,373,246	-		GFF4442	0.88	-0.5
1,373,263	+		GFF4442	0.89	+0.4
1,373,263	+		GFF4442	0.89	-0.6
1,373,266	+		GFF4442	0.90	-0.3
1,373,267	-		GFF4442	0.90	-0.3