Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3685

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
573,479	+		GFF3684	0.31	-0.5
573,602	+		GFF3684	0.40	-2.6
573,722	+		GFF3684	0.50	-2.1
573,873	-		GFF3684	0.62	-2.0
573,881	+		GFF3684	0.63	-1.3
574,562	-		GFF3685	0.42	-1.5
574,571	-		GFF3685	0.44	-1.5
574,571	-		GFF3685	0.44	-1.9
574,571	-		GFF3685	0.44	-1.7
574,977	+				-1.7
575,247	+		GFF3686	0.29	-0.9
575,247	+		GFF3686	0.29	-2.1
575,248	-		GFF3686	0.29	-1.9
575,319	+		GFF3686	0.34	-1.9
575,347	-		GFF3686	0.36	+0.2
575,677	-		GFF3686	0.60	-1.7
575,677	-		GFF3686	0.60	-2.1
575,712	+		GFF3686	0.62	-3.1