Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3602

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
490,412	+		GFF3601	0.48	+0.2
490,412	+		GFF3601	0.48	+0.4
490,412	+		GFF3601	0.48	+0.1
490,413	-		GFF3601	0.48	+0.2
490,529	+		GFF3601	0.61	+0.4
490,529	+		GFF3601	0.61	+0.0
490,530	-		GFF3601	0.61	+0.4
490,763	-		GFF3601	0.87	+0.1
490,864	-				-0.4
490,864	-				+0.7
490,864	-				+0.7
490,864	-				-0.6
490,907	+				+0.7
490,908	-				+0.4
490,983	+				+0.1
490,983	+				+0.4
491,025	+				-0.7
491,026	-				-0.9
491,102	-		GFF3602	0.14	-0.6
491,650	-		GFF3603	0.11	-0.1
491,956	-		GFF3603	0.68	-1.7
492,202	+				+0.0