Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3284

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
169,591	+		GFF3283	0.63	-0.0
170,222	-				-0.1
170,288	-				-0.3
170,464	-				-0.8
170,488	-		GFF3284	0.14	-0.4
170,488	-		GFF3284	0.14	-0.4
170,488	-		GFF3284	0.14	-0.1
170,716	-		GFF3284	0.57	+0.3
170,826	+		GFF3284	0.77	-0.0
170,826	+		GFF3284	0.77	-0.1
170,827	-		GFF3284	0.77	-0.1
170,827	-		GFF3284	0.77	-1.2
170,862	+		GFF3284	0.84	-0.5
170,863	-		GFF3284	0.84	+0.1
170,863	-		GFF3284	0.84	-0.2