Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2150

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
1,040,012	+		GFF2148	0.86	+0.3
1,040,012	+		GFF2148	0.86	+0.8
1,040,036	+		GFF2148	0.87	-1.0
1,040,240	+				-0.6
1,040,313	-				+0.5
1,040,384	-		GFF2149	0.13	-0.0
1,040,389	+		GFF2149	0.14	+0.1
1,040,389	+		GFF2149	0.14	-0.3
1,040,389	+		GFF2149	0.14	+0.3
1,040,390	-		GFF2149	0.14	+0.1
1,040,390	-		GFF2149	0.14	+0.8
1,040,446	+		GFF2149	0.22	-1.6
1,040,731	+		GFF2149	0.61	-0.5
1,040,731	+		GFF2149	0.61	+0.5
1,040,731	+		GFF2149	0.61	+0.8
1,041,321	+		GFF2150	0.34	+0.6
1,041,321	+		GFF2150	0.34	-1.3
1,041,321	+		GFF2150	0.34	+1.4
1,041,322	-		GFF2150	0.34	+0.4
1,041,322	-		GFF2150	0.34	-0.0
1,041,430	-		GFF2150	0.46	+1.4
1,041,748	-		GFF2150	0.81	+0.4
1,042,226	+		GFF2151	0.32	-1.2
1,042,241	+		GFF2151	0.34	-0.1
1,042,379	+		GFF2151	0.48	-1.3
1,042,467	-		GFF2151	0.57	-1.4