Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1622

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
476,565	-				+0.3
476,602	-				-0.9
476,602	-				-0.3
477,254	+		GFF1622	0.86	+0.3
477,652	+		GFF1623	0.16	+0.7
477,994	+		GFF1623	0.35	-1.0
478,084	+		GFF1623	0.40	-0.0
478,085	-		GFF1623	0.40	-0.2
478,243	+		GFF1623	0.49	+1.1
478,243	+		GFF1623	0.49	-0.5
478,243	+		GFF1623	0.49	-1.0
478,244	-		GFF1623	0.49	-0.2
478,244	-		GFF1623	0.49	+0.5
478,244	-		GFF1623	0.49	+0.2
478,244	-		GFF1623	0.49	+1.2