Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1494

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
342,131	+		GFF1493	0.16	-0.7
342,302	+		GFF1493	0.32	-1.9
342,434	+		GFF1493	0.44	+0.2
342,434	+		GFF1493	0.44	+1.0
342,434	+		GFF1493	0.44	-0.1
342,435	-		GFF1493	0.44	-0.9
342,435	-		GFF1493	0.44	+0.4
343,099	-				-0.5
343,099	-				+0.0
343,099	-				-0.5
343,099	-				+0.2
343,575	+		GFF1494	0.43	+0.9
343,576	-		GFF1494	0.43	-0.0
343,576	-		GFF1494	0.43	+0.2
344,270	+				-0.1
344,270	+				-0.1
344,270	+				-0.1
344,270	+				-1.5
344,271	-				+0.1
344,271	-				+0.1
344,272	+				+1.2
344,325	+				+0.7
344,386	+				-0.1
344,387	-				+0.1
344,387	-				+0.7
344,388	+				+0.6
344,878	+		GFF1495	0.48	+0.6
344,879	-		GFF1495	0.48	-0.8