Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1285

Experiment: Ying_OrganicAcid7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 2
140,888	+				-0.8
140,888	+				+0.1
140,888	+				+0.6
140,888	+				+0.3
140,888	+				+0.3
140,889	-				+0.1
140,889	-				-0.2
140,895	-				+0.2
140,921	+				+1.1
140,921	+				+0.1
140,921	+				-0.3
140,921	+				+0.7
140,921	+				+0.1
140,921	+				+0.1
140,922	-				-0.3
140,922	-				+0.6
140,922	-				-0.2
140,993	+		GFF1283	0.15	+0.8
140,994	-		GFF1283	0.15	-0.3
140,994	-		GFF1283	0.15	-0.1
141,043	+		GFF1283	0.22	-0.8
141,179	+		GFF1283	0.40	+0.8
141,287	+		GFF1283	0.54	+0.3
141,287	+		GFF1283	0.54	-0.7
141,288	-		GFF1283	0.54	+0.9
141,288	-		GFF1283	0.54	+0.2
141,288	-		GFF1283	0.54	+0.2
141,288	-		GFF1283	0.54	-0.2
141,290	+		GFF1283	0.54	-0.5
141,290	+		GFF1283	0.54	-0.4
141,290	+		GFF1283	0.54	+0.6
141,290	+		GFF1283	0.54	-0.9
141,290	+		GFF1283	0.54	+0.4
141,290	+		GFF1283	0.54	+0.6
141,290	+		GFF1283	0.54	+2.1
141,290	+		GFF1283	0.54	-0.7
141,290	+		GFF1283	0.54	-0.1
141,291	-		GFF1283	0.54	+0.1
141,712	+		GFF1284	0.34	-0.8
141,713	-		GFF1284	0.34	-0.4
141,713	-		GFF1284	0.34	-0.0
142,028	-		GFF1285	0.38	+1.6
142,157	-		GFF1285	0.67	-1.2
142,165	+		GFF1285	0.68	+0.8
142,165	+		GFF1285	0.68	-0.2
142,165	+		GFF1285	0.68	+0.8
142,165	+		GFF1285	0.68	+0.3
142,165	+		GFF1285	0.68	+3.4
142,165	+		GFF1285	0.68	+0.5
142,165	+		GFF1285	0.68	+0.1
142,166	-		GFF1285	0.69	-0.2
142,166	-		GFF1285	0.69	-0.1
142,166	-		GFF1285	0.69	+0.1
142,166	-		GFF1285	0.69	-1.7
142,166	-		GFF1285	0.69	-0.3
142,166	-		GFF1285	0.69	-0.0
142,166	-		GFF1285	0.69	+0.2
142,166	-		GFF1285	0.69	-0.1
142,166	-		GFF1285	0.69	+0.1
142,166	-		GFF1285	0.69	+0.3
142,166	-		GFF1285	0.69	+0.7
142,333	-				-0.6
142,350	+				+0.1
142,473	+		GFF1286	0.19	-0.2
142,473	+		GFF1286	0.19	+1.2
142,473	+		GFF1286	0.19	+0.0
142,473	+		GFF1286	0.19	-0.4
142,474	-		GFF1286	0.19	-0.9
142,474	-		GFF1286	0.19	-0.1
142,494	+		GFF1286	0.22	+1.5
142,494	+		GFF1286	0.22	+0.0
142,494	+		GFF1286	0.22	-0.3
142,494	+		GFF1286	0.22	+0.8
142,494	+		GFF1286	0.22	-0.0
142,494	+		GFF1286	0.22	-0.3
142,494	+		GFF1286	0.22	-0.6
142,495	-		GFF1286	0.22	+0.7
142,495	-		GFF1286	0.22	+0.1
142,495	-		GFF1286	0.22	+0.0
142,587	+		GFF1286	0.32	-0.3
142,587	+		GFF1286	0.32	+0.9
142,587	+		GFF1286	0.32	-0.2
142,587	+		GFF1286	0.32	-0.3
142,587	+		GFF1286	0.32	-0.1
142,588	-		GFF1286	0.32	-0.3
142,588	-		GFF1286	0.32	-0.0
142,588	-		GFF1286	0.32	+0.8
142,588	-		GFF1286	0.32	+0.5
142,588	-		GFF1286	0.32	+0.0
142,608	+		GFF1286	0.35	+0.2
142,608	+		GFF1286	0.35	+0.3
142,608	+		GFF1286	0.35	-0.3
142,609	-		GFF1286	0.35	+0.2
142,609	-		GFF1286	0.35	+0.4
142,644	+		GFF1286	0.39	+0.3
142,644	+		GFF1286	0.39	+0.2
142,644	+		GFF1286	0.39	+0.2
142,645	-		GFF1286	0.39	-0.5
142,645	-		GFF1286	0.39	-0.1
142,707	+		GFF1286	0.46	-0.1
142,851	+		GFF1286	0.62	+0.6
142,851	+		GFF1286	0.62	-1.3
142,851	+		GFF1286	0.62	-0.1
142,851	+		GFF1286	0.62	-1.3
142,851	+		GFF1286	0.62	+0.1
142,851	+		GFF1286	0.62	+0.1
143,189	+				-0.0
143,210	+				+0.2
143,210	+				-0.7
143,210	+				-0.5
143,210	+				-1.9
143,211	-				+0.7
143,211	-				-0.7
143,211	-				-0.5