Strain Fitness in Escherichia fergusonii Becca around EFB2_03683

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
3,847,907	-		EFB2_03681	0.76	+1.2
3,847,956	+		EFB2_03681	0.80	-0.5
3,847,956	+		EFB2_03681	0.80	+0.2
3,847,965	+		EFB2_03681	0.81	-1.2
3,847,965	+		EFB2_03681	0.81	-2.6
3,847,965	+		EFB2_03681	0.81	+1.1
3,847,965	+		EFB2_03681	0.81	+0.2
3,847,965	+		EFB2_03681	0.81	-1.5
3,847,965	+		EFB2_03681	0.81	+1.5
3,847,965	+		EFB2_03681	0.81	+0.6
3,847,965	+		EFB2_03681	0.81	+0.4
3,847,965	+		EFB2_03681	0.81	-0.1
3,847,966	-		EFB2_03681	0.81	+0.8
3,847,966	-		EFB2_03681	0.81	+0.0
3,847,966	-		EFB2_03681	0.81	-1.6
3,847,966	-		EFB2_03681	0.81	-0.2
3,847,966	-		EFB2_03681	0.81	+1.4
3,847,966	-		EFB2_03681	0.81	-0.3
3,847,967	+		EFB2_03681	0.81	+1.8
3,847,967	+		EFB2_03681	0.81	-1.7
3,847,967	+		EFB2_03681	0.81	+0.9
3,847,967	+		EFB2_03681	0.81	-1.0
3,847,967	+		EFB2_03681	0.81	-0.7
3,847,967	+		EFB2_03681	0.81	-0.6
3,847,967	+		EFB2_03681	0.81	-0.4
3,847,967	+		EFB2_03681	0.81	+0.0
3,847,967	+		EFB2_03681	0.81	-2.3
3,847,967	+		EFB2_03681	0.81	+0.3
3,847,967	+		EFB2_03681	0.81	+0.3
3,847,967	+		EFB2_03681	0.81	+1.0
3,847,967	+		EFB2_03681	0.81	+0.6
3,847,967	+		EFB2_03681	0.81	+0.3
3,847,967	+		EFB2_03681	0.81	-0.5
3,847,967	+		EFB2_03681	0.81	-0.4
3,847,967	+		EFB2_03681	0.81	-0.6
3,847,967	+		EFB2_03681	0.81	-0.7
3,847,967	+		EFB2_03681	0.81	-0.8
3,847,967	+		EFB2_03681	0.81	+0.3
3,847,967	+		EFB2_03681	0.81	-0.2
3,847,967	+		EFB2_03681	0.81	-0.2
3,847,967	+		EFB2_03681	0.81	+1.0
3,847,967	+		EFB2_03681	0.81	-0.4
3,847,967	+		EFB2_03681	0.81	+3.2
3,847,967	+		EFB2_03681	0.81	-0.2
3,847,967	+		EFB2_03681	0.81	+0.8
3,847,967	+		EFB2_03681	0.81	+0.7
3,847,967	+		EFB2_03681	0.81	+2.0
3,847,967	+		EFB2_03681	0.81	+0.6
3,847,967	+		EFB2_03681	0.81	-0.1
3,847,967	+		EFB2_03681	0.81	+1.6
3,847,967	+		EFB2_03681	0.81	-0.4
3,847,967	+		EFB2_03681	0.81	-1.3
3,847,967	+		EFB2_03681	0.81	-0.0
3,847,967	+		EFB2_03681	0.81	+0.7
3,847,967	+		EFB2_03681	0.81	+1.2
3,847,967	+		EFB2_03681	0.81	-0.8
3,847,967	+		EFB2_03681	0.81	-2.6
3,847,967	+		EFB2_03681	0.81	-1.4
3,847,967	+		EFB2_03681	0.81	-1.2
3,847,967	+		EFB2_03681	0.81	-0.5
3,847,967	+		EFB2_03681	0.81	+1.3
3,847,967	+		EFB2_03681	0.81	-1.3
3,847,967	+		EFB2_03681	0.81	-2.7
3,847,968	-		EFB2_03681	0.81	-0.8
3,847,968	-		EFB2_03681	0.81	-0.5
3,847,968	-		EFB2_03681	0.81	-0.6
3,847,968	-		EFB2_03681	0.81	+0.1
3,847,968	-		EFB2_03681	0.81	+1.0
3,847,968	-		EFB2_03681	0.81	-0.3
3,847,968	-		EFB2_03681	0.81	-0.6
3,847,968	-		EFB2_03681	0.81	+0.2
3,847,968	-		EFB2_03681	0.81	-2.0
3,847,968	-		EFB2_03681	0.81	-1.4
3,847,968	-		EFB2_03681	0.81	-1.7
3,847,968	-		EFB2_03681	0.81	-1.5
3,847,968	-		EFB2_03681	0.81	+0.4
3,847,968	-		EFB2_03681	0.81	+0.6
3,847,968	-		EFB2_03681	0.81	+0.5
3,847,968	-		EFB2_03681	0.81	+0.6
3,847,968	-		EFB2_03681	0.81	+0.5
3,847,968	-		EFB2_03681	0.81	+0.0
3,847,968	-		EFB2_03681	0.81	-1.2
3,847,968	-		EFB2_03681	0.81	-2.4
3,847,968	-		EFB2_03681	0.81	+0.6
3,847,968	-		EFB2_03681	0.81	+2.4
3,847,968	-		EFB2_03681	0.81	+1.1
3,847,968	-		EFB2_03681	0.81	+0.3
3,847,968	-		EFB2_03681	0.81	-0.4
3,847,968	-		EFB2_03681	0.81	+3.8
3,847,968	-		EFB2_03681	0.81	-1.5
3,847,968	-		EFB2_03681	0.81	+1.2
3,847,968	-		EFB2_03681	0.81	+0.8
3,847,968	-		EFB2_03681	0.81	-0.4
3,847,968	-		EFB2_03681	0.81	+0.8
3,847,968	-		EFB2_03681	0.81	-0.6
3,847,968	-		EFB2_03681	0.81	+2.4
3,847,968	-		EFB2_03681	0.81	-1.1
3,847,968	-		EFB2_03681	0.81	-3.1
3,847,968	-		EFB2_03681	0.81	-1.6
3,847,969	+		EFB2_03681	0.81	+0.4
3,847,969	+		EFB2_03681	0.81	+0.1
3,847,969	+		EFB2_03681	0.81	+0.1
3,847,969	+		EFB2_03681	0.81	-3.3
3,847,969	+		EFB2_03681	0.81	-0.9
3,847,969	+		EFB2_03681	0.81	+0.1
3,847,969	+		EFB2_03681	0.81	+0.2
3,847,969	+		EFB2_03681	0.81	-0.9
3,847,969	+		EFB2_03681	0.81	+0.8
3,847,969	+		EFB2_03681	0.81	+0.9
3,847,969	+		EFB2_03681	0.81	-0.5
3,847,969	+		EFB2_03681	0.81	-0.4
3,847,969	+		EFB2_03681	0.81	+0.2
3,847,969	+		EFB2_03681	0.81	-2.2
3,847,969	+		EFB2_03681	0.81	+1.0
3,847,969	+		EFB2_03681	0.81	-1.0
3,847,969	+		EFB2_03681	0.81	+0.1
3,847,969	+		EFB2_03681	0.81	+0.2
3,847,969	+		EFB2_03681	0.81	-0.7
3,847,969	+		EFB2_03681	0.81	+1.3
3,847,969	+		EFB2_03681	0.81	-1.3
3,847,969	+		EFB2_03681	0.81	+0.6
3,847,969	+		EFB2_03681	0.81	-0.2
3,847,969	+		EFB2_03681	0.81	+1.2
3,847,969	+		EFB2_03681	0.81	-0.4
3,847,969	+		EFB2_03681	0.81	+1.6
3,847,969	+		EFB2_03681	0.81	+0.2
3,847,969	+		EFB2_03681	0.81	-0.7
3,847,969	+		EFB2_03681	0.81	-2.4
3,847,969	+		EFB2_03681	0.81	+0.0
3,847,970	-		EFB2_03681	0.81	-0.0
3,847,970	-		EFB2_03681	0.81	-0.0
3,847,970	-		EFB2_03681	0.81	+1.4
3,847,970	-		EFB2_03681	0.81	-2.0
3,847,970	-		EFB2_03681	0.81	+1.7
3,847,970	-		EFB2_03681	0.81	+1.0
3,847,970	-		EFB2_03681	0.81	+0.0
3,847,970	-		EFB2_03681	0.81	+2.2
3,847,970	-		EFB2_03681	0.81	-0.5
3,847,970	-		EFB2_03681	0.81	-1.0
3,847,970	-		EFB2_03681	0.81	-2.5
3,847,970	-		EFB2_03681	0.81	-1.2
3,847,970	-		EFB2_03681	0.81	+0.2
3,847,970	-		EFB2_03681	0.81	-2.7
3,847,970	-		EFB2_03681	0.81	-0.5
3,847,970	-		EFB2_03681	0.81	-0.8
3,847,970	-		EFB2_03681	0.81	+0.9
3,847,970	-		EFB2_03681	0.81	+0.3
3,847,970	-		EFB2_03681	0.81	-0.3
3,847,970	-		EFB2_03681	0.81	+0.5
3,847,970	-		EFB2_03681	0.81	-3.3
3,847,970	-		EFB2_03681	0.81	+1.5
3,847,970	-		EFB2_03681	0.81	+0.6
3,847,970	-		EFB2_03681	0.81	+0.3
3,847,970	-		EFB2_03681	0.81	+1.1
3,848,000	-		EFB2_03681	0.84	+4.2
3,848,032	+		EFB2_03681	0.87	+0.5
3,848,032	+		EFB2_03681	0.87	+0.6
3,848,032	+		EFB2_03681	0.87	-1.0
3,848,032	+		EFB2_03681	0.87	+2.8
3,848,033	-		EFB2_03681	0.87	-0.8
3,848,033	-		EFB2_03681	0.87	+0.3
3,848,036	+		EFB2_03681	0.87	+0.9
3,848,036	+		EFB2_03681	0.87	+0.1
3,848,036	+		EFB2_03681	0.87	-0.0
3,848,036	+		EFB2_03681	0.87	-1.9
3,848,036	+		EFB2_03681	0.87	-3.0
3,848,036	+		EFB2_03681	0.87	+0.4
3,848,036	+		EFB2_03681	0.87	+2.0
3,848,036	+		EFB2_03681	0.87	-0.4
3,848,036	+		EFB2_03681	0.87	+0.1
3,848,036	+		EFB2_03681	0.87	-1.2
3,848,036	+		EFB2_03681	0.87	+0.4
3,848,036	+		EFB2_03681	0.87	-0.2
3,848,036	+		EFB2_03681	0.87	-0.7
3,848,036	+		EFB2_03681	0.87	-0.8
3,848,036	+		EFB2_03681	0.87	+0.1
3,848,036	+		EFB2_03681	0.87	+0.3
3,848,036	+		EFB2_03681	0.87	-1.5
3,848,036	+		EFB2_03681	0.87	+2.0
3,848,036	+		EFB2_03681	0.87	-1.6
3,848,036	+		EFB2_03681	0.87	+1.7
3,848,036	+		EFB2_03681	0.87	-2.0
3,848,036	+		EFB2_03681	0.87	+0.4
3,848,036	+		EFB2_03681	0.87	+1.2
3,848,036	+		EFB2_03681	0.87	+1.7
3,848,036	+		EFB2_03681	0.87	-0.0
3,848,036	+		EFB2_03681	0.87	+0.1
3,848,036	+		EFB2_03681	0.87	+0.6
3,848,037	-		EFB2_03681	0.87	+2.5
3,848,037	-		EFB2_03681	0.87	-0.6
3,848,037	-		EFB2_03681	0.87	+1.0
3,848,037	-		EFB2_03681	0.87	-0.6
3,848,037	-		EFB2_03681	0.87	+0.3
3,848,037	-		EFB2_03681	0.87	+1.0
3,848,037	-		EFB2_03681	0.87	+0.4
3,848,037	-		EFB2_03681	0.87	-2.0
3,848,037	-		EFB2_03681	0.87	+0.5
3,848,037	-		EFB2_03681	0.87	+2.5
3,848,037	-		EFB2_03681	0.87	-0.4
3,848,037	-		EFB2_03681	0.87	+0.9
3,848,037	-		EFB2_03681	0.87	-0.4
3,848,037	-		EFB2_03681	0.87	+0.3
3,848,037	-		EFB2_03681	0.87	-0.1
3,848,037	-		EFB2_03681	0.87	+0.1
3,848,037	-		EFB2_03681	0.87	+0.5
3,848,037	-		EFB2_03681	0.87	-1.3
3,848,037	-		EFB2_03681	0.87	-1.7
3,848,038	+		EFB2_03681	0.87	+1.8
3,848,039	-		EFB2_03681	0.87	-1.2
3,848,062	+		EFB2_03681	0.89	-1.4
3,848,062	+		EFB2_03681	0.89	+0.5
3,848,148	+				+0.8
3,848,149	-				+0.5
3,848,149	-				-0.0
3,848,149	-				-0.2
3,848,159	-				-0.7
3,848,187	+				-0.3
3,848,188	-				+0.3
3,848,188	-				-0.0
3,848,190	+				+1.1
3,848,190	+				-0.2
3,848,191	-				-2.0
3,848,244	+				-0.5
3,848,244	+				+1.9
3,848,244	+				-1.9
3,848,244	+				+0.7
3,848,245	-				-0.5
3,848,245	-				-1.2
3,848,245	-				+1.0
3,848,255	-		EFB2_03682	0.11	-0.3
3,848,255	-		EFB2_03682	0.11	+0.0
3,848,294	+		EFB2_03682	0.17	+1.4
3,848,296	+		EFB2_03682	0.18	+0.2
3,848,296	+		EFB2_03682	0.18	-3.0
3,848,296	+		EFB2_03682	0.18	+0.2
3,848,296	+		EFB2_03682	0.18	+0.6
3,848,297	-		EFB2_03682	0.18	+0.4
3,848,297	-		EFB2_03682	0.18	-0.0
3,848,297	-		EFB2_03682	0.18	-0.2
3,848,297	-		EFB2_03682	0.18	+0.8
3,848,297	-		EFB2_03682	0.18	+0.1
3,848,297	-		EFB2_03682	0.18	-0.0
3,848,303	-		EFB2_03682	0.19	-0.9
3,848,314	+		EFB2_03682	0.21	-1.7
3,848,315	-		EFB2_03682	0.21	+0.2
3,848,315	-		EFB2_03682	0.21	-2.3
3,848,316	+		EFB2_03682	0.21	+1.0
3,848,316	+		EFB2_03682	0.21	-2.4
3,848,316	+		EFB2_03682	0.21	+0.8
3,848,317	-		EFB2_03682	0.21	+1.2
3,848,317	-		EFB2_03682	0.21	+0.2
3,848,317	-		EFB2_03682	0.21	+2.6
3,848,332	+		EFB2_03682	0.23	-1.0
3,848,332	+		EFB2_03682	0.23	+1.7
3,848,494	+		EFB2_03682	0.49	-1.2
3,848,494	+		EFB2_03682	0.49	+0.6
3,848,534	-		EFB2_03682	0.56	-1.0
3,848,553	-		EFB2_03682	0.59	+1.2
3,848,553	-		EFB2_03682	0.59	+0.6
3,848,564	+		EFB2_03682	0.61	-2.2
3,848,564	+		EFB2_03682	0.61	+0.2
3,848,564	+		EFB2_03682	0.61	-1.1
3,848,564	+		EFB2_03682	0.61	+1.5
3,848,564	+		EFB2_03682	0.61	-2.5
3,848,565	-		EFB2_03682	0.61	-0.0
3,848,565	-		EFB2_03682	0.61	+1.4
3,848,565	-		EFB2_03682	0.61	-0.5
3,848,602	+		EFB2_03682	0.67	+0.3
3,848,603	-		EFB2_03682	0.67	-2.2
3,848,604	+		EFB2_03682	0.67	-0.4
3,848,604	+		EFB2_03682	0.67	+0.7
3,848,617	+		EFB2_03682	0.69	-2.5
3,848,630	+		EFB2_03682	0.71	+1.0
3,848,630	+		EFB2_03682	0.71	-0.9
3,848,631	-		EFB2_03682	0.71	-2.8
3,848,657	-		EFB2_03682	0.75	-0.9
3,848,711	-		EFB2_03682	0.84	-1.1
3,848,729	-		EFB2_03682	0.87	-2.2
3,848,764	+				-0.4
3,848,798	+				+0.7
3,848,798	+				+0.6
3,848,798	+				+0.1
3,848,798	+				+1.4
3,848,798	+				+1.8
3,848,799	-				+2.4
3,848,799	-				+1.1
3,848,856	-				-0.1
3,848,869	+				+3.8
3,848,869	+				+0.4
3,848,870	-				+0.1
3,848,874	-				+0.7
3,848,874	-				-0.6
3,848,874	-				+0.0
3,848,874	-				-1.5
3,848,893	+				-2.2
3,848,894	-				+0.5
3,848,896	+				-0.1
3,848,896	+				-1.9
3,848,897	-				-2.3
3,848,903	+				-1.3
3,848,903	+				+0.4
3,848,904	-				-0.6
3,848,904	-				-0.2
3,848,905	+				+0.9
3,848,905	+				-1.0
3,848,905	+				+0.1
3,848,905	+				+0.8
3,848,906	-				-1.6
3,848,906	-				-0.2
3,848,906	-				-0.1
3,848,906	-				+0.1
3,848,906	-				-0.3
3,848,906	-				-0.4
3,848,909	+				+0.1
3,848,909	+				-0.1
3,848,909	+				-1.8
3,848,909	+				-0.2
3,848,910	-				+0.5
3,848,910	-				-0.5
3,848,910	-				-2.7
3,848,940	+				+1.1
3,848,940	+				-0.4
3,848,940	+				-1.5
3,848,940	+				+0.1
3,848,940	+				-0.4
3,848,940	+				+0.6
3,848,940	+				-0.4
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