Strain Fitness in Escherichia fergusonii Becca around EFB2_01979

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
2,138,886	+				+1.3
2,138,886	+				+0.7
2,138,887	-				+0.4
2,138,896	+				+0.8
2,138,896	+				-2.6
2,138,896	+				+0.2
2,138,896	+				-1.2
2,138,897	-				-1.4
2,138,897	-				-2.4
2,138,897	-				-0.2
2,138,897	-				+0.5
2,138,913	+				-0.3
2,138,914	-				-1.5
2,138,951	-				-0.3
2,138,951	-				+1.1
2,138,955	+				+1.3
2,138,955	+				+0.6
2,138,955	+				-0.4
2,138,955	+				+0.3
2,138,955	+				-1.1
2,138,955	+				+4.4
2,138,955	+				+0.7
2,138,955	+				-0.2
2,138,955	+				+0.5
2,138,956	-				+1.3
2,138,956	-				-0.2
2,138,956	-				-0.4
2,138,956	-				+0.4
2,138,956	-				-0.8
2,138,956	-				+1.6
2,138,956	-				+0.9
2,138,956	-				-0.1
2,138,956	-				-1.2
2,138,956	-				+1.0
2,138,966	+				+0.6
2,138,967	-				+0.1
2,138,974	+				-0.2
2,138,979	+				-2.4
2,138,980	-				+0.8
2,139,026	-				-0.2
2,139,042	-				+2.2
2,139,182	+				-0.9
2,139,182	+				+0.6
2,139,182	+				-1.9
2,139,183	-				-0.1
2,139,183	-				+1.4
2,139,190	+				-2.8
2,139,190	+				-2.0
2,139,190	+				+0.9
2,139,191	-				+2.2
2,139,191	-				+0.2
2,139,191	-				+0.2
2,139,191	-				+0.2
2,139,193	-				-1.7
2,139,193	-				+1.2
2,139,193	-				-0.7
2,139,193	-				-1.8
2,139,193	-				-1.7
2,139,193	-				+0.1
2,139,198	+				-0.3
2,139,198	+				+2.7
2,139,251	+				-0.0
2,139,254	-		EFB2_01978	0.10	-0.6
2,139,254	-		EFB2_01978	0.10	+0.6
2,139,254	-		EFB2_01978	0.10	+1.3
2,139,259	-		EFB2_01978	0.11	+0.1
2,139,265	-		EFB2_01978	0.12	-1.4
2,139,273	+		EFB2_01978	0.13	-0.2
2,139,274	-		EFB2_01978	0.13	+1.5
2,139,289	+		EFB2_01978	0.16	+1.2
2,139,289	+		EFB2_01978	0.16	-0.1
2,139,289	+		EFB2_01978	0.16	+0.3
2,139,289	+		EFB2_01978	0.16	-2.2
2,139,289	+		EFB2_01978	0.16	-2.8
2,139,289	+		EFB2_01978	0.16	-0.7
2,139,289	+		EFB2_01978	0.16	+0.1
2,139,289	+		EFB2_01978	0.16	-2.0
2,139,289	+		EFB2_01978	0.16	-0.6
2,139,289	+		EFB2_01978	0.16	-0.3
2,139,289	+		EFB2_01978	0.16	-1.0
2,139,289	+		EFB2_01978	0.16	+1.4
2,139,290	-		EFB2_01978	0.16	-1.1
2,139,290	-		EFB2_01978	0.16	+0.5
2,139,290	-		EFB2_01978	0.16	-0.0
2,139,290	-		EFB2_01978	0.16	+0.4
2,139,290	-		EFB2_01978	0.16	+0.2
2,139,290	-		EFB2_01978	0.16	-0.6
2,139,290	-		EFB2_01978	0.16	+0.1
2,139,290	-		EFB2_01978	0.16	+1.4
2,139,290	-		EFB2_01978	0.16	-0.3
2,139,290	-		EFB2_01978	0.16	-1.8
2,139,311	+		EFB2_01978	0.19	+0.9
2,139,312	-		EFB2_01978	0.19	-0.4
2,139,331	+		EFB2_01978	0.22	-0.6
2,139,331	+		EFB2_01978	0.22	+1.0
2,139,331	+		EFB2_01978	0.22	+0.2
2,139,331	+		EFB2_01978	0.22	-0.9
2,139,331	+		EFB2_01978	0.22	+1.0
2,139,331	+		EFB2_01978	0.22	-0.1
2,139,332	-		EFB2_01978	0.22	-0.8
2,139,332	-		EFB2_01978	0.22	-1.2
2,139,332	-		EFB2_01978	0.22	-1.8
2,139,332	-		EFB2_01978	0.22	+1.3
2,139,336	+		EFB2_01978	0.23	-1.6
2,139,336	+		EFB2_01978	0.23	-0.1
2,139,336	+		EFB2_01978	0.23	-0.1
2,139,337	-		EFB2_01978	0.23	-1.1
2,139,337	-		EFB2_01978	0.23	-0.6
2,139,361	+		EFB2_01978	0.27	+0.8
2,139,361	+		EFB2_01978	0.27	-1.2
2,139,371	+		EFB2_01978	0.29	-1.0
2,139,371	+		EFB2_01978	0.29	-2.2
2,139,372	-		EFB2_01978	0.29	-0.6
2,139,372	-		EFB2_01978	0.29	+2.9
2,139,446	+		EFB2_01978	0.40	-1.3
2,139,446	+		EFB2_01978	0.40	+2.6
2,139,447	-		EFB2_01978	0.41	-2.2
2,139,447	-		EFB2_01978	0.41	+1.0
2,139,458	+		EFB2_01978	0.42	-1.6
2,139,466	-		EFB2_01978	0.44	+0.2
2,139,471	+		EFB2_01978	0.44	-0.3
2,139,472	-		EFB2_01978	0.44	+3.7
2,139,472	-		EFB2_01978	0.44	+0.2
2,139,475	+		EFB2_01978	0.45	-1.7
2,139,489	+		EFB2_01978	0.47	-0.9
2,139,489	+		EFB2_01978	0.47	+1.0
2,139,489	+		EFB2_01978	0.47	+0.4
2,139,489	+		EFB2_01978	0.47	+0.6
2,139,490	-		EFB2_01978	0.47	-1.6
2,139,490	-		EFB2_01978	0.47	+0.5
2,139,490	-		EFB2_01978	0.47	+0.3
2,139,497	+		EFB2_01978	0.48	-2.2
2,139,501	+		EFB2_01978	0.49	-0.6
2,139,501	+		EFB2_01978	0.49	-1.7
2,139,501	+		EFB2_01978	0.49	+1.4
2,139,501	+		EFB2_01978	0.49	-2.2
2,139,501	+		EFB2_01978	0.49	+0.3
2,139,501	+		EFB2_01978	0.49	+0.5
2,139,502	-		EFB2_01978	0.49	-1.8
2,139,502	-		EFB2_01978	0.49	-1.9
2,139,502	-		EFB2_01978	0.49	-0.1
2,139,502	-		EFB2_01978	0.49	+0.3
2,139,502	-		EFB2_01978	0.49	-0.8
2,139,502	-		EFB2_01978	0.49	+0.4
2,139,502	-		EFB2_01978	0.49	-0.3
2,139,502	-		EFB2_01978	0.49	-3.1
2,139,541	+		EFB2_01978	0.55	-0.2
2,139,541	+		EFB2_01978	0.55	-1.7
2,139,542	-		EFB2_01978	0.56	-3.0
2,139,549	+		EFB2_01978	0.57	-0.2
2,139,549	+		EFB2_01978	0.57	+2.0
2,139,550	-		EFB2_01978	0.57	+0.5
2,139,550	-		EFB2_01978	0.57	-0.4
2,139,579	+		EFB2_01978	0.61	+1.2
2,139,579	+		EFB2_01978	0.61	+3.2
2,139,579	+		EFB2_01978	0.61	+1.5
2,139,579	+		EFB2_01978	0.61	+0.4
2,139,579	+		EFB2_01978	0.61	-1.9
2,139,579	+		EFB2_01978	0.61	-0.2
2,139,580	-		EFB2_01978	0.61	+0.3
2,139,586	-		EFB2_01978	0.62	-0.6
2,139,586	-		EFB2_01978	0.62	-1.4
2,139,698	+		EFB2_01978	0.80	-0.4
2,139,698	+		EFB2_01978	0.80	+1.3
2,139,698	+		EFB2_01978	0.80	-1.5
2,139,698	+		EFB2_01978	0.80	+0.3
2,139,699	-		EFB2_01978	0.80	-1.2
2,139,699	-		EFB2_01978	0.80	-1.3
2,139,856	+				-0.5
2,139,856	+				-0.1
2,139,856	+				-0.6
2,139,857	-				+0.4
2,139,885	+				-0.7
2,139,887	+				+1.8
2,139,887	+				+4.0
2,139,887	+				-0.7
2,139,888	-				+0.6
2,139,894	+				-1.0
2,139,894	+				-2.7
2,139,894	+				+0.7
2,139,894	+				-1.2
2,139,894	+				-0.3
2,139,895	-				-0.6
2,139,939	-		EFB2_01979	0.11	+1.4
2,140,007	-		EFB2_01979	0.18	-1.0
2,140,007	-		EFB2_01979	0.18	+0.9
2,140,021	-		EFB2_01979	0.20	-1.0
2,140,062	-		EFB2_01979	0.24	+0.3
2,140,062	-		EFB2_01979	0.24	+0.8
2,140,062	-		EFB2_01979	0.24	+0.9
2,140,064	+		EFB2_01979	0.24	-0.8
2,140,064	+		EFB2_01979	0.24	-1.0
2,140,065	-		EFB2_01979	0.24	+1.0
2,140,079	+		EFB2_01979	0.25	+0.2
2,140,080	-		EFB2_01979	0.25	+1.4
2,140,080	-		EFB2_01979	0.25	-1.2
2,140,080	-		EFB2_01979	0.25	+2.0
2,140,089	-		EFB2_01979	0.26	+0.4
2,140,096	+		EFB2_01979	0.27	-1.9
2,140,164	+		EFB2_01979	0.34	+0.2
2,140,164	+		EFB2_01979	0.34	+1.3
2,140,164	+		EFB2_01979	0.34	+2.7
2,140,164	+		EFB2_01979	0.34	+0.4
2,140,164	+		EFB2_01979	0.34	-0.6
2,140,164	+		EFB2_01979	0.34	-1.1
2,140,164	+		EFB2_01979	0.34	-3.3
2,140,164	+		EFB2_01979	0.34	+1.2
2,140,164	+		EFB2_01979	0.34	-1.2
2,140,164	+		EFB2_01979	0.34	-0.5
2,140,164	+		EFB2_01979	0.34	+0.5
2,140,164	+		EFB2_01979	0.34	-0.5
2,140,164	+		EFB2_01979	0.34	-0.5
2,140,164	+		EFB2_01979	0.34	+1.3
2,140,164	+		EFB2_01979	0.34	+2.2
2,140,164	+		EFB2_01979	0.34	-1.5
2,140,164	+		EFB2_01979	0.34	+2.9
2,140,164	+		EFB2_01979	0.34	+1.3
2,140,164	+		EFB2_01979	0.34	+0.8
2,140,164	+		EFB2_01979	0.34	-0.1
2,140,165	-		EFB2_01979	0.34	+2.2
2,140,165	-		EFB2_01979	0.34	-0.2
2,140,165	-		EFB2_01979	0.34	+1.4
2,140,165	-		EFB2_01979	0.34	-0.2
2,140,165	-		EFB2_01979	0.34	-0.5
2,140,165	-		EFB2_01979	0.34	+2.8
2,140,165	-		EFB2_01979	0.34	+0.6
2,140,165	-		EFB2_01979	0.34	-2.7
2,140,165	-		EFB2_01979	0.34	-1.2
2,140,165	-		EFB2_01979	0.34	-1.8
2,140,165	-		EFB2_01979	0.34	-2.4
2,140,165	-		EFB2_01979	0.34	+3.4
2,140,165	-		EFB2_01979	0.34	-0.2
2,140,219	+		EFB2_01979	0.39	-0.6
2,140,219	+		EFB2_01979	0.39	-2.2
2,140,219	+		EFB2_01979	0.39	+0.2
2,140,219	+		EFB2_01979	0.39	+1.0
2,140,220	-		EFB2_01979	0.39	+0.2
2,140,220	-		EFB2_01979	0.39	+1.6
2,140,220	-		EFB2_01979	0.39	-1.2
2,140,220	-		EFB2_01979	0.39	+1.5
2,140,220	-		EFB2_01979	0.39	-1.6
2,140,220	-		EFB2_01979	0.39	-1.3
2,140,220	-		EFB2_01979	0.39	-2.6
2,140,220	-		EFB2_01979	0.39	+0.9
2,140,220	-		EFB2_01979	0.39	-2.2
2,140,225	+		EFB2_01979	0.40	+0.9
2,140,225	+		EFB2_01979	0.40	+1.0
2,140,225	+		EFB2_01979	0.40	-0.7
2,140,225	+		EFB2_01979	0.40	-0.6
2,140,225	+		EFB2_01979	0.40	+0.6
2,140,225	+		EFB2_01979	0.40	+1.7
2,140,226	-		EFB2_01979	0.40	-1.3
2,140,226	-		EFB2_01979	0.40	-2.3
2,140,226	-		EFB2_01979	0.40	-0.1
2,140,226	-		EFB2_01979	0.40	-0.0
2,140,226	-		EFB2_01979	0.40	-0.2
2,140,282	+		EFB2_01979	0.45	+0.6
2,140,303	+		EFB2_01979	0.48	-0.0
2,140,303	+		EFB2_01979	0.48	+0.3
2,140,303	+		EFB2_01979	0.48	-2.8
2,140,303	+		EFB2_01979	0.48	+0.9
2,140,303	+		EFB2_01979	0.48	+1.3
2,140,303	+		EFB2_01979	0.48	-0.9
2,140,303	+		EFB2_01979	0.48	+3.7
2,140,303	+		EFB2_01979	0.48	-0.2
2,140,303	+		EFB2_01979	0.48	+4.3
2,140,303	+		EFB2_01979	0.48	+0.2
2,140,303	+		EFB2_01979	0.48	+1.2
2,140,303	+		EFB2_01979	0.48	+0.2
2,140,303	+		EFB2_01979	0.48	-1.6
2,140,303	+		EFB2_01979	0.48	+0.7
2,140,303	+		EFB2_01979	0.48	+1.2
2,140,303	+		EFB2_01979	0.48	-1.7
2,140,303	+		EFB2_01979	0.48	+0.5
2,140,303	+		EFB2_01979	0.48	+1.1
2,140,304	-		EFB2_01979	0.48	+0.8
2,140,304	-		EFB2_01979	0.48	+1.9
2,140,304	-		EFB2_01979	0.48	-0.2
2,140,304	-		EFB2_01979	0.48	-1.6
2,140,304	-		EFB2_01979	0.48	+0.0
2,140,304	-		EFB2_01979	0.48	-2.6
2,140,304	-		EFB2_01979	0.48	+0.8
2,140,304	-		EFB2_01979	0.48	+2.2
2,140,304	-		EFB2_01979	0.48	-1.4
2,140,400	+		EFB2_01979	0.57	-0.2
2,140,400	+		EFB2_01979	0.57	+1.5
2,140,401	-		EFB2_01979	0.57	-0.5
2,140,406	-		EFB2_01979	0.58	-1.8
2,140,406	-		EFB2_01979	0.58	+0.6
2,140,406	-		EFB2_01979	0.58	-2.9
2,140,406	-		EFB2_01979	0.58	+1.2
2,140,409	+		EFB2_01979	0.58	+0.6
2,140,409	+		EFB2_01979	0.58	-1.0
2,140,409	+		EFB2_01979	0.58	+0.8
2,140,410	-		EFB2_01979	0.58	+0.2
2,140,410	-		EFB2_01979	0.58	-1.4
2,140,410	-		EFB2_01979	0.58	+0.3
2,140,410	-		EFB2_01979	0.58	+0.1
2,140,410	-		EFB2_01979	0.58	+0.7
2,140,410	-		EFB2_01979	0.58	+5.2
2,140,410	-		EFB2_01979	0.58	+1.1
2,140,410	-		EFB2_01979	0.58	-0.1
2,140,410	-		EFB2_01979	0.58	+0.4
2,140,437	+		EFB2_01979	0.61	+2.0
2,140,438	-		EFB2_01979	0.61	-0.8
2,140,514	+		EFB2_01979	0.69	-1.9
2,140,523	+		EFB2_01979	0.69	+0.6
2,140,523	+		EFB2_01979	0.69	-1.5
2,140,524	-		EFB2_01979	0.70	+0.5
2,140,558	+		EFB2_01979	0.73	-1.2
2,140,568	+		EFB2_01979	0.74	-2.9
2,140,568	+		EFB2_01979	0.74	-0.1
2,140,569	-		EFB2_01979	0.74	-0.2
2,140,569	-		EFB2_01979	0.74	-2.7
2,140,569	-		EFB2_01979	0.74	+0.9
2,140,584	-		EFB2_01979	0.76	-1.4
2,140,584	-		EFB2_01979	0.76	+0.0
2,140,584	-		EFB2_01979	0.76	-1.0
2,140,607	+		EFB2_01979	0.78	+1.7
2,140,607	+		EFB2_01979	0.78	-0.8
2,140,688	+		EFB2_01979	0.86	-1.7
2,140,688	+		EFB2_01979	0.86	+0.2
2,140,688	+		EFB2_01979	0.86	+1.9
2,140,689	-		EFB2_01979	0.86	-1.8
2,140,689	-		EFB2_01979	0.86	-1.2
2,140,689	-		EFB2_01979	0.86	+0.8
2,140,753	-				-1.0
2,140,773	-				-1.8
2,140,773	-				-1.3
2,140,793	+				-0.2
2,140,793	+				+0.2
2,140,877	+				-2.2
2,140,878	-				-0.8
2,140,907	+				+0.7
2,140,907	+				-2.1
2,140,908	-				-0.8
2,140,924	+				-0.7
2,140,924	+				-0.1
2,140,924	+				+1.2
2,140,925	-				-1.2
2,140,925	-				+0.3
2,140,925	-				+0.2
2,140,929	-				+0.0
2,140,929	-				+1.0
2,140,932	+				-1.4
2,140,933	-				+0.3
2,140,933	-				-1.0
2,140,933	-				+0.0
2,140,939	+				-1.3
2,140,940	-				-0.5
2,140,951	+				+1.5
2,140,951	+				-1.5
2,140,967	-				-0.3
2,140,994	-		EFB2_01980	0.14	-1.3
2,141,009	+		EFB2_01980	0.17	+0.3
2,141,010	-		EFB2_01980	0.17	+1.9
2,141,010	-		EFB2_01980	0.17	-0.8
2,141,012	+		EFB2_01980	0.18	+2.0
2,141,012	+		EFB2_01980	0.18	+2.2
2,141,013	-		EFB2_01980	0.18	+1.2
2,141,013	-		EFB2_01980	0.18	-0.1
2,141,071	+		EFB2_01980	0.32	-2.0
2,141,071	+		EFB2_01980	0.32	+0.8
2,141,072	-		EFB2_01980	0.32	-1.0
2,141,072	-		EFB2_01980	0.32	-1.3
2,141,089	-		EFB2_01980	0.36	-1.5
2,141,109	-		EFB2_01980	0.41	-0.6
2,141,138	+		EFB2_01980	0.48	-0.9
2,141,139	-		EFB2_01980	0.49	-1.5
2,141,139	-		EFB2_01980	0.49	-0.8
2,141,139	-		EFB2_01980	0.49	+1.0
2,141,153	+		EFB2_01980	0.52	+0.7
2,141,153	+		EFB2_01980	0.52	+1.4
2,141,154	-		EFB2_01980	0.52	+0.7
2,141,171	+		EFB2_01980	0.56	-1.3
2,141,171	+		EFB2_01980	0.56	+1.1
2,141,171	+		EFB2_01980	0.56	+0.5
2,141,171	+		EFB2_01980	0.56	-2.5
2,141,172	-		EFB2_01980	0.57	+1.2
2,141,172	-		EFB2_01980	0.57	-2.9
2,141,265	-		EFB2_01980	0.79	+0.6
2,141,334	+				+0.8
2,141,338	+				+3.6
2,141,338	+				+0.6
2,141,338	+				-0.5
2,141,339	-				+2.2
2,141,346	+				+0.9
2,141,355	+				-1.2
2,141,355	+				-1.0
2,141,355	+				-0.0
2,141,355	+				-0.2
2,141,355	+				-1.9
2,141,356	-				-0.7
2,141,356	-				+1.3
2,141,356	-				-2.2
2,141,356	-				-1.1
2,141,356	-				+1.0
2,141,356	-				+0.2
2,141,356	-				-0.4
2,141,356	-				-0.9
2,141,357	+				+0.6
2,141,357	+				-0.8
2,141,358	-				-1.0
2,141,358	-				-0.5
2,141,413	+				+0.8
2,141,414	-				-0.3
2,141,424	+				-0.2
2,141,424	+				-1.4
2,141,425	-				+0.9
2,141,435	-				+0.3
2,141,435	-				-1.4
2,141,453	+		EFB2_01981	0.10	-0.8
2,141,455	+		EFB2_01981	0.10	-0.8
2,141,460	+		EFB2_01981	0.11	-0.9
2,141,460	+		EFB2_01981	0.11	+1.2
2,141,460	+		EFB2_01981	0.11	+0.5
2,141,461	-		EFB2_01981	0.11	+0.7
2,141,461	-		EFB2_01981	0.11	-1.7
2,141,474	+		EFB2_01981	0.13	-0.2
2,141,478	-		EFB2_01981	0.13	+1.2
2,141,478	-		EFB2_01981	0.13	-2.7
2,141,478	-		EFB2_01981	0.13	-1.0
2,141,478	-		EFB2_01981	0.13	+1.6
2,141,494	+		EFB2_01981	0.15	-0.3
2,141,498	+		EFB2_01981	0.16	-2.4
2,141,498	+		EFB2_01981	0.16	+0.0
2,141,498	+		EFB2_01981	0.16	+0.4
2,141,499	-		EFB2_01981	0.16	+1.7
2,141,507	+		EFB2_01981	0.17	-1.1
2,141,507	+		EFB2_01981	0.17	+2.2
2,141,556	+		EFB2_01981	0.23	-0.4
2,141,556	+		EFB2_01981	0.23	-1.0
2,141,557	-		EFB2_01981	0.23	-0.2
2,141,557	-		EFB2_01981	0.23	+0.2
2,141,616	+		EFB2_01981	0.31	+1.6
2,141,616	+		EFB2_01981	0.31	+0.0
2,141,616	+		EFB2_01981	0.31	+0.4
2,141,616	+		EFB2_01981	0.31	-1.8
2,141,616	+		EFB2_01981	0.31	+0.5
2,141,617	-		EFB2_01981	0.31	-1.0
2,141,617	-		EFB2_01981	0.31	-0.7
2,141,639	+		EFB2_01981	0.34	-0.6
2,141,639	+		EFB2_01981	0.34	-0.5
2,141,640	-		EFB2_01981	0.34	-0.4
2,141,671	+		EFB2_01981	0.38	+0.7
2,141,671	+		EFB2_01981	0.38	-0.2
2,141,671	+		EFB2_01981	0.38	-0.4
2,141,672	-		EFB2_01981	0.38	+1.7
2,141,672	-		EFB2_01981	0.38	+0.6
2,141,705	+		EFB2_01981	0.42	-1.1
2,141,706	-		EFB2_01981	0.43	+1.3
2,141,715	-		EFB2_01981	0.44	-0.4
2,141,773	-		EFB2_01981	0.51	+0.9
2,141,773	-		EFB2_01981	0.51	+0.2
2,141,827	+		EFB2_01981	0.58	+0.6
2,141,827	+		EFB2_01981	0.58	-2.7
2,141,828	-		EFB2_01981	0.58	+0.7