Strain Fitness in Escherichia fergusonii Becca around EFB2_01527

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
1,599,082	+		EFB2_01526	0.20	-2.6
1,599,083	-		EFB2_01526	0.20	-2.0
1,599,091	+		EFB2_01526	0.21	+0.3
1,599,091	+		EFB2_01526	0.21	-0.4
1,599,091	+		EFB2_01526	0.21	+1.0
1,599,091	+		EFB2_01526	0.21	+0.3
1,599,091	+		EFB2_01526	0.21	+0.8
1,599,091	+		EFB2_01526	0.21	+0.7
1,599,091	+		EFB2_01526	0.21	-0.7
1,599,092	-		EFB2_01526	0.21	-0.9
1,599,092	-		EFB2_01526	0.21	+1.6
1,599,092	-		EFB2_01526	0.21	+1.1
1,599,092	-		EFB2_01526	0.21	-2.1
1,599,108	+		EFB2_01526	0.23	-0.2
1,599,108	+		EFB2_01526	0.23	+0.3
1,599,108	+		EFB2_01526	0.23	-1.9
1,599,108	+		EFB2_01526	0.23	-0.7
1,599,108	+		EFB2_01526	0.23	+0.8
1,599,108	+		EFB2_01526	0.23	-3.6
1,599,108	+		EFB2_01526	0.23	-1.6
1,599,108	+		EFB2_01526	0.23	+1.5
1,599,109	-		EFB2_01526	0.23	+1.5
1,599,109	-		EFB2_01526	0.23	-0.6
1,599,109	-		EFB2_01526	0.23	+0.8
1,599,109	-		EFB2_01526	0.23	+1.7
1,599,109	-		EFB2_01526	0.23	+1.4
1,599,109	-		EFB2_01526	0.23	+0.8
1,599,109	-		EFB2_01526	0.23	-1.0
1,599,109	-		EFB2_01526	0.23	-3.3
1,599,109	-		EFB2_01526	0.23	-0.0
1,599,128	+		EFB2_01526	0.25	-0.4
1,599,134	+		EFB2_01526	0.26	-0.2
1,599,134	+		EFB2_01526	0.26	-2.1
1,599,135	-		EFB2_01526	0.26	+0.1
1,599,135	-		EFB2_01526	0.26	-0.8
1,599,135	-		EFB2_01526	0.26	+0.4
1,599,187	+		EFB2_01526	0.32	+0.7
1,599,187	+		EFB2_01526	0.32	+0.6
1,599,188	-		EFB2_01526	0.32	+0.7
1,599,188	-		EFB2_01526	0.32	-2.1
1,599,188	-		EFB2_01526	0.32	-1.7
1,599,188	-		EFB2_01526	0.32	-1.0
1,599,188	-		EFB2_01526	0.32	-1.5
1,599,188	-		EFB2_01526	0.32	+0.1
1,599,188	-		EFB2_01526	0.32	+0.7
1,599,188	-		EFB2_01526	0.32	-1.0
1,599,188	-		EFB2_01526	0.32	+0.0
1,599,195	-		EFB2_01526	0.33	-2.9
1,599,226	+		EFB2_01526	0.37	+0.2
1,599,226	+		EFB2_01526	0.37	+0.0
1,599,226	+		EFB2_01526	0.37	-0.1
1,599,226	+		EFB2_01526	0.37	-1.4
1,599,226	+		EFB2_01526	0.37	-1.8
1,599,226	+		EFB2_01526	0.37	+0.5
1,599,226	+		EFB2_01526	0.37	-1.1
1,599,226	+		EFB2_01526	0.37	+1.6
1,599,226	+		EFB2_01526	0.37	-0.5
1,599,226	+		EFB2_01526	0.37	-0.4
1,599,226	+		EFB2_01526	0.37	+1.0
1,599,226	+		EFB2_01526	0.37	+0.6
1,599,226	+		EFB2_01526	0.37	+1.3
1,599,226	+		EFB2_01526	0.37	-0.4
1,599,226	+		EFB2_01526	0.37	-1.4
1,599,227	-		EFB2_01526	0.37	+0.7
1,599,227	-		EFB2_01526	0.37	-0.2
1,599,227	-		EFB2_01526	0.37	+0.8
1,599,227	-		EFB2_01526	0.37	-1.2
1,599,227	-		EFB2_01526	0.37	-1.6
1,599,227	-		EFB2_01526	0.37	-1.2
1,599,227	-		EFB2_01526	0.37	-1.1
1,599,227	-		EFB2_01526	0.37	+0.3
1,599,227	-		EFB2_01526	0.37	+1.3
1,599,227	-		EFB2_01526	0.37	+0.1
1,599,227	-		EFB2_01526	0.37	+0.9
1,599,227	-		EFB2_01526	0.37	-3.4
1,599,227	-		EFB2_01526	0.37	-1.8
1,599,227	-		EFB2_01526	0.37	-1.3
1,599,227	-		EFB2_01526	0.37	+0.3
1,599,227	-		EFB2_01526	0.37	+1.9
1,599,227	-		EFB2_01526	0.37	+1.0
1,599,227	-		EFB2_01526	0.37	-2.3
1,599,227	-		EFB2_01526	0.37	+1.5
1,599,244	-		EFB2_01526	0.39	+1.2
1,599,244	-		EFB2_01526	0.39	+1.6
1,599,267	+		EFB2_01526	0.42	-4.1
1,599,267	+		EFB2_01526	0.42	-1.2
1,599,267	+		EFB2_01526	0.42	-1.6
1,599,267	+		EFB2_01526	0.42	-0.4
1,599,267	+		EFB2_01526	0.42	-0.3
1,599,267	+		EFB2_01526	0.42	-0.6
1,599,267	+		EFB2_01526	0.42	+1.3
1,599,267	+		EFB2_01526	0.42	-0.7
1,599,267	+		EFB2_01526	0.42	-1.4
1,599,268	-		EFB2_01526	0.42	-1.2
1,599,268	-		EFB2_01526	0.42	-0.4
1,599,268	-		EFB2_01526	0.42	-0.2
1,599,268	-		EFB2_01526	0.42	+0.1
1,599,268	-		EFB2_01526	0.42	+1.5
1,599,268	-		EFB2_01526	0.42	+0.8
1,599,268	-		EFB2_01526	0.42	+0.1
1,599,268	-		EFB2_01526	0.42	-0.2
1,599,268	-		EFB2_01526	0.42	-0.8
1,599,268	-		EFB2_01526	0.42	+0.1
1,599,268	-		EFB2_01526	0.42	+0.5
1,599,268	-		EFB2_01526	0.42	-2.5
1,599,268	-		EFB2_01526	0.42	+1.2
1,599,268	-		EFB2_01526	0.42	+1.0
1,599,276	+		EFB2_01526	0.43	+1.7
1,599,277	-		EFB2_01526	0.43	-1.9
1,599,283	+		EFB2_01526	0.43	-0.0
1,599,283	+		EFB2_01526	0.43	-0.3
1,599,283	+		EFB2_01526	0.43	-2.1
1,599,284	-		EFB2_01526	0.44	+1.2
1,599,299	+		EFB2_01526	0.45	+0.3
1,599,299	+		EFB2_01526	0.45	+0.5
1,599,299	+		EFB2_01526	0.45	-1.2
1,599,299	+		EFB2_01526	0.45	-0.5
1,599,299	+		EFB2_01526	0.45	+0.4
1,599,299	+		EFB2_01526	0.45	-1.6
1,599,299	+		EFB2_01526	0.45	+0.6
1,599,299	+		EFB2_01526	0.45	-1.2
1,599,299	+		EFB2_01526	0.45	+2.3
1,599,300	-		EFB2_01526	0.45	-1.0
1,599,300	-		EFB2_01526	0.45	-0.2
1,599,300	-		EFB2_01526	0.45	-0.8
1,599,300	-		EFB2_01526	0.45	+0.4
1,599,300	-		EFB2_01526	0.45	+0.0
1,599,300	-		EFB2_01526	0.45	+1.7
1,599,300	-		EFB2_01526	0.45	-2.1
1,599,300	-		EFB2_01526	0.45	+0.8
1,599,317	+		EFB2_01526	0.47	+0.4
1,599,317	+		EFB2_01526	0.47	+0.9
1,599,318	-		EFB2_01526	0.48	+0.1
1,599,318	-		EFB2_01526	0.48	+0.2
1,599,318	-		EFB2_01526	0.48	-0.7
1,599,318	-		EFB2_01526	0.48	+0.0
1,599,318	-		EFB2_01526	0.48	+0.5
1,599,318	-		EFB2_01526	0.48	-3.3
1,599,328	+		EFB2_01526	0.49	-2.3
1,599,328	+		EFB2_01526	0.49	-0.8
1,599,328	+		EFB2_01526	0.49	-0.2
1,599,328	+		EFB2_01526	0.49	-0.3
1,599,328	+		EFB2_01526	0.49	-0.8
1,599,328	+		EFB2_01526	0.49	-1.4
1,599,328	+		EFB2_01526	0.49	+1.0
1,599,328	+		EFB2_01526	0.49	-2.3
1,599,328	+		EFB2_01526	0.49	+1.8
1,599,328	+		EFB2_01526	0.49	-1.2
1,599,328	+		EFB2_01526	0.49	-1.9
1,599,328	+		EFB2_01526	0.49	-1.5
1,599,328	+		EFB2_01526	0.49	-1.6
1,599,328	+		EFB2_01526	0.49	+0.7
1,599,328	+		EFB2_01526	0.49	+0.1
1,599,328	+		EFB2_01526	0.49	-0.4
1,599,329	-		EFB2_01526	0.49	+0.6
1,599,329	-		EFB2_01526	0.49	-1.7
1,599,329	-		EFB2_01526	0.49	-0.5
1,599,329	-		EFB2_01526	0.49	+2.5
1,599,329	-		EFB2_01526	0.49	+0.8
1,599,329	-		EFB2_01526	0.49	-1.6
1,599,329	-		EFB2_01526	0.49	+0.3
1,599,329	-		EFB2_01526	0.49	-1.6
1,599,336	+		EFB2_01526	0.50	-1.6
1,599,336	+		EFB2_01526	0.50	+1.2
1,599,336	+		EFB2_01526	0.50	+0.1
1,599,336	+		EFB2_01526	0.50	+1.3
1,599,337	-		EFB2_01526	0.50	-0.1
1,599,337	-		EFB2_01526	0.50	+1.1
1,599,337	-		EFB2_01526	0.50	-0.2
1,599,337	-		EFB2_01526	0.50	-2.0
1,599,337	-		EFB2_01526	0.50	+1.1
1,599,337	-		EFB2_01526	0.50	-1.4
1,599,337	-		EFB2_01526	0.50	+1.5
1,599,350	-		EFB2_01526	0.51	-0.2
1,599,356	+		EFB2_01526	0.52	-1.3
1,599,356	+		EFB2_01526	0.52	-1.4
1,599,356	+		EFB2_01526	0.52	-1.2
1,599,356	+		EFB2_01526	0.52	+0.8
1,599,356	+		EFB2_01526	0.52	-0.8
1,599,356	+		EFB2_01526	0.52	+0.6
1,599,356	+		EFB2_01526	0.52	+1.6
1,599,356	+		EFB2_01526	0.52	+1.7
1,599,356	+		EFB2_01526	0.52	-0.7
1,599,356	+		EFB2_01526	0.52	-1.4
1,599,356	+		EFB2_01526	0.52	-1.0
1,599,356	+		EFB2_01526	0.52	+0.1
1,599,356	+		EFB2_01526	0.52	+1.1
1,599,356	+		EFB2_01526	0.52	+0.3
1,599,356	+		EFB2_01526	0.52	-2.4
1,599,356	+		EFB2_01526	0.52	+1.3
1,599,356	+		EFB2_01526	0.52	+1.7
1,599,356	+		EFB2_01526	0.52	+0.3
1,599,356	+		EFB2_01526	0.52	-0.4
1,599,356	+		EFB2_01526	0.52	-1.1
1,599,357	-		EFB2_01526	0.52	-2.4
1,599,357	-		EFB2_01526	0.52	+0.2
1,599,357	-		EFB2_01526	0.52	-0.3
1,599,357	-		EFB2_01526	0.52	+1.0
1,599,357	-		EFB2_01526	0.52	-1.6
1,599,357	-		EFB2_01526	0.52	+0.1
1,599,357	-		EFB2_01526	0.52	+1.7
1,599,357	-		EFB2_01526	0.52	+0.7
1,599,357	-		EFB2_01526	0.52	+0.2
1,599,367	+		EFB2_01526	0.53	+0.6
1,599,367	+		EFB2_01526	0.53	+0.1
1,599,367	+		EFB2_01526	0.53	-0.6
1,599,367	+		EFB2_01526	0.53	+0.6
1,599,367	+		EFB2_01526	0.53	-1.6
1,599,367	+		EFB2_01526	0.53	-0.0
1,599,367	+		EFB2_01526	0.53	+0.2
1,599,367	+		EFB2_01526	0.53	+1.2
1,599,367	+		EFB2_01526	0.53	+0.2
1,599,367	+		EFB2_01526	0.53	-0.4
1,599,367	+		EFB2_01526	0.53	+0.6
1,599,367	+		EFB2_01526	0.53	+2.2
1,599,367	+		EFB2_01526	0.53	-3.0
1,599,367	+		EFB2_01526	0.53	-0.9
1,599,368	-		EFB2_01526	0.53	-0.9
1,599,368	-		EFB2_01526	0.53	-2.1
1,599,368	-		EFB2_01526	0.53	+0.5
1,599,368	-		EFB2_01526	0.53	+1.8
1,599,368	-		EFB2_01526	0.53	+0.2
1,599,368	-		EFB2_01526	0.53	+3.5
1,599,368	-		EFB2_01526	0.53	-2.4
1,599,387	+		EFB2_01526	0.56	+1.0
1,599,387	+		EFB2_01526	0.56	-0.1
1,599,387	+		EFB2_01526	0.56	+0.1
1,599,387	+		EFB2_01526	0.56	-0.2
1,599,388	-		EFB2_01526	0.56	-1.0
1,599,388	-		EFB2_01526	0.56	-0.7
1,599,388	-		EFB2_01526	0.56	+0.8
1,599,418	+		EFB2_01526	0.59	-1.2
1,599,418	+		EFB2_01526	0.59	+1.6
1,599,418	+		EFB2_01526	0.59	+0.1
1,599,418	+		EFB2_01526	0.59	-0.6
1,599,418	+		EFB2_01526	0.59	-2.8
1,599,418	+		EFB2_01526	0.59	+0.1
1,599,418	+		EFB2_01526	0.59	-0.5
1,599,418	+		EFB2_01526	0.59	+2.6
1,599,418	+		EFB2_01526	0.59	-0.5
1,599,418	+		EFB2_01526	0.59	-0.4
1,599,418	+		EFB2_01526	0.59	-2.7
1,599,418	+		EFB2_01526	0.59	+0.3
1,599,418	+		EFB2_01526	0.59	-1.1
1,599,418	+		EFB2_01526	0.59	+0.5
1,599,418	+		EFB2_01526	0.59	+2.1
1,599,418	+		EFB2_01526	0.59	+1.9
1,599,418	+		EFB2_01526	0.59	-1.8
1,599,418	+		EFB2_01526	0.59	-0.7
1,599,418	+		EFB2_01526	0.59	+0.6
1,599,419	-		EFB2_01526	0.60	+1.1
1,599,419	-		EFB2_01526	0.60	-1.0
1,599,419	-		EFB2_01526	0.60	-0.5
1,599,419	-		EFB2_01526	0.60	-0.7
1,599,419	-		EFB2_01526	0.60	+0.5
1,599,419	-		EFB2_01526	0.60	-2.5
1,599,419	-		EFB2_01526	0.60	+0.1
1,599,419	-		EFB2_01526	0.60	+0.6
1,599,419	-		EFB2_01526	0.60	+0.5
1,599,419	-		EFB2_01526	0.60	-0.3
1,599,419	-		EFB2_01526	0.60	-0.0
1,599,419	-		EFB2_01526	0.60	+1.0
1,599,419	-		EFB2_01526	0.60	+1.0
1,599,423	+		EFB2_01526	0.60	-0.8
1,599,423	+		EFB2_01526	0.60	-1.9
1,599,423	+		EFB2_01526	0.60	+0.0
1,599,423	+		EFB2_01526	0.60	+0.5
1,599,423	+		EFB2_01526	0.60	-1.2
1,599,423	+		EFB2_01526	0.60	-1.0
1,599,423	+		EFB2_01526	0.60	+0.6
1,599,424	-		EFB2_01526	0.60	+0.4
1,599,424	-		EFB2_01526	0.60	+1.8
1,599,424	-		EFB2_01526	0.60	-1.3
1,599,424	-		EFB2_01526	0.60	+0.3
1,599,424	-		EFB2_01526	0.60	+0.4
1,599,424	-		EFB2_01526	0.60	-1.1
1,599,424	-		EFB2_01526	0.60	-1.0
1,599,424	-		EFB2_01526	0.60	+0.4
1,599,424	-		EFB2_01526	0.60	-0.4
1,599,442	+		EFB2_01526	0.62	-1.3
1,599,442	+		EFB2_01526	0.62	-1.0
1,599,442	+		EFB2_01526	0.62	-2.0
1,599,442	+		EFB2_01526	0.62	-1.3
1,599,442	+		EFB2_01526	0.62	-2.7
1,599,442	+		EFB2_01526	0.62	-1.9
1,599,442	+		EFB2_01526	0.62	-0.6
1,599,442	+		EFB2_01526	0.62	-1.5
1,599,442	+		EFB2_01526	0.62	-2.1
1,599,442	+		EFB2_01526	0.62	-1.8
1,599,442	+		EFB2_01526	0.62	+1.3
1,599,442	+		EFB2_01526	0.62	-2.6
1,599,443	-		EFB2_01526	0.62	-2.6
1,599,443	-		EFB2_01526	0.62	+0.1
1,599,443	-		EFB2_01526	0.62	-0.2
1,599,443	-		EFB2_01526	0.62	+0.0
1,599,443	-		EFB2_01526	0.62	-3.3
1,599,443	-		EFB2_01526	0.62	-1.5
1,599,443	-		EFB2_01526	0.62	-0.0
1,599,568	+		EFB2_01526	0.77	-0.5
1,599,568	+		EFB2_01526	0.77	+0.7
1,599,568	+		EFB2_01526	0.77	+1.5
1,599,568	+		EFB2_01526	0.77	+2.0
1,599,568	+		EFB2_01526	0.77	-0.9
1,599,568	+		EFB2_01526	0.77	+1.0
1,599,568	+		EFB2_01526	0.77	+0.6
1,599,568	+		EFB2_01526	0.77	+1.0
1,599,568	+		EFB2_01526	0.77	-1.6
1,599,568	+		EFB2_01526	0.77	-1.6
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