Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01228

Experiment: Xylan from corncob 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corncob 2.5 mg/mL (C)
7,157	-		BACOVA_01227	0.35	+0.7
7,157	-		BACOVA_01227	0.35	-0.4
7,157	-		BACOVA_01227	0.35	+1.7
7,157	-		BACOVA_01227	0.35	-0.5
7,183	-		BACOVA_01227	0.37	-1.0
7,187	-		BACOVA_01227	0.37	-0.9
7,197	-		BACOVA_01227	0.38	+0.6
7,205	+		BACOVA_01227	0.38	-0.5
7,205	+		BACOVA_01227	0.38	-0.4
7,206	-		BACOVA_01227	0.38	+0.1
7,207	+		BACOVA_01227	0.38	-1.1
7,208	-		BACOVA_01227	0.38	+0.3
7,214	-		BACOVA_01227	0.39	+1.1
7,224	+		BACOVA_01227	0.39	+0.1
7,224	+		BACOVA_01227	0.39	+1.1
7,247	-		BACOVA_01227	0.41	-1.1
7,267	-		BACOVA_01227	0.42	-0.1
7,293	-		BACOVA_01227	0.44	+0.5
7,293	-		BACOVA_01227	0.44	+0.2
7,298	-		BACOVA_01227	0.44	+1.5
7,307	+		BACOVA_01227	0.45	-1.1
7,307	+		BACOVA_01227	0.45	-0.2
7,310	-		BACOVA_01227	0.45	+0.2
7,324	+		BACOVA_01227	0.46	-0.5
7,337	-		BACOVA_01227	0.47	+2.2
7,350	-		BACOVA_01227	0.48	-0.7
7,359	+		BACOVA_01227	0.48	-0.0
7,360	-		BACOVA_01227	0.48	-1.2
7,367	-		BACOVA_01227	0.49	+1.0
7,374	-		BACOVA_01227	0.49	-1.6
7,374	-		BACOVA_01227	0.49	-0.2
7,381	-		BACOVA_01227	0.50	-0.5
7,388	+		BACOVA_01227	0.50	-0.5
7,396	+		BACOVA_01227	0.51	+0.3
7,424	+		BACOVA_01227	0.53	-0.9
7,426	+		BACOVA_01227	0.53	+0.2
7,432	+		BACOVA_01227	0.53	-0.6
7,436	+		BACOVA_01227	0.53	-0.3
7,437	-		BACOVA_01227	0.53	+0.1
7,445	-		BACOVA_01227	0.54	-0.5
7,445	-		BACOVA_01227	0.54	+0.5
7,474	-		BACOVA_01227	0.56	+1.8
7,486	+		BACOVA_01227	0.57	-0.3
7,499	+		BACOVA_01227	0.58	-0.4
7,522	+		BACOVA_01227	0.59	+0.3
7,572	+		BACOVA_01227	0.62	-1.6
7,607	-		BACOVA_01227	0.65	+1.3
7,826	-		BACOVA_01227	0.79	-1.4
7,837	+		BACOVA_01227	0.80	-0.7
7,838	-		BACOVA_01227	0.80	-0.8
7,866	+		BACOVA_01227	0.82	-2.5
7,884	+		BACOVA_01227	0.83	-0.1
7,894	+		BACOVA_01227	0.83	+0.2
7,904	+		BACOVA_01227	0.84	-0.6
7,971	+		BACOVA_01227	0.89	+0.5
7,971	+		BACOVA_01227	0.89	+0.2
7,972	-		BACOVA_01227	0.89	-0.5
7,972	-		BACOVA_01227	0.89	-0.3
7,997	-				-0.9
8,039	+				-0.0
8,039	+				-0.3
8,118	+				-0.4
8,118	+				-0.0
8,118	+				-2.2
8,123	-				-0.9
8,153	+				-0.6
8,215	+				-0.3
8,215	+				+0.0
8,215	+				+0.4
8,288	-				-0.5
8,301	-				+1.5
8,432	+				+0.1
8,432	+				-0.7
8,433	-				+1.6
8,468	-		BACOVA_01228	0.11	-0.9
8,492	-		BACOVA_01228	0.11	-0.3
8,603	+		BACOVA_01228	0.15	+0.4
8,604	-		BACOVA_01228	0.15	+0.1
8,604	-		BACOVA_01228	0.15	-0.1
8,606	+		BACOVA_01228	0.15	+0.0
8,671	+		BACOVA_01228	0.18	+0.4
8,672	-		BACOVA_01228	0.18	+0.4
8,682	-		BACOVA_01228	0.18	+0.9
8,706	+		BACOVA_01228	0.19	+0.6
8,790	-		BACOVA_01228	0.22	+0.3
8,805	+		BACOVA_01228	0.22	-0.3
8,805	+		BACOVA_01228	0.22	-0.4
8,854	+		BACOVA_01228	0.24	-0.4
8,859	+		BACOVA_01228	0.24	-0.3
8,859	+		BACOVA_01228	0.24	-1.3
8,978	+		BACOVA_01228	0.28	+0.3
8,984	+		BACOVA_01228	0.28	-0.2
8,984	+		BACOVA_01228	0.28	-1.6
9,011	+		BACOVA_01228	0.29	-1.0
9,011	+		BACOVA_01228	0.29	-0.2
9,012	-		BACOVA_01228	0.29	+1.7
9,026	+		BACOVA_01228	0.30	-0.7
9,029	+		BACOVA_01228	0.30	+0.9
9,032	-		BACOVA_01228	0.30	-0.4
9,053	+		BACOVA_01228	0.31	-0.4
9,062	+		BACOVA_01228	0.31	-0.8
9,063	-		BACOVA_01228	0.31	+0.2
9,086	+		BACOVA_01228	0.32	-0.2
9,090	-		BACOVA_01228	0.32	+0.9
9,098	+		BACOVA_01228	0.32	-0.5
9,098	+		BACOVA_01228	0.32	-0.8
9,098	+		BACOVA_01228	0.32	-1.6
9,099	-		BACOVA_01228	0.32	-1.0
9,143	+		BACOVA_01228	0.34	+0.9
9,160	+		BACOVA_01228	0.34	-0.5
9,161	-		BACOVA_01228	0.34	-0.2
9,164	+		BACOVA_01228	0.34	+0.8
9,164	+		BACOVA_01228	0.34	-1.7
9,165	-		BACOVA_01228	0.34	-0.8
9,165	-		BACOVA_01228	0.34	+1.1
9,196	+		BACOVA_01228	0.35	-0.0
9,200	+		BACOVA_01228	0.36	-0.8
9,206	+		BACOVA_01228	0.36	-0.5
9,224	+		BACOVA_01228	0.36	+0.1
9,230	+		BACOVA_01228	0.37	+0.5
9,255	-		BACOVA_01228	0.37	+0.2
9,266	-		BACOVA_01228	0.38	-1.4
9,385	+		BACOVA_01228	0.42	+0.3
9,401	-		BACOVA_01228	0.42	-0.2
9,440	-		BACOVA_01228	0.44	-1.1
9,522	-		BACOVA_01228	0.47	-0.3
9,549	+		BACOVA_01228	0.47	-0.7
9,573	-		BACOVA_01228	0.48	+0.5
9,603	-		BACOVA_01228	0.49	+1.2
9,626	+		BACOVA_01228	0.50	+0.5
9,691	+		BACOVA_01228	0.52	-1.4
9,720	-		BACOVA_01228	0.53	+0.5
9,722	+		BACOVA_01228	0.53	+0.3
9,722	+		BACOVA_01228	0.53	+0.1
9,722	+		BACOVA_01228	0.53	-0.8
9,723	-		BACOVA_01228	0.53	-0.3
9,730	+		BACOVA_01228	0.54	-0.1
9,741	+		BACOVA_01228	0.54	+0.9
9,768	+		BACOVA_01228	0.55	-0.6
9,808	+		BACOVA_01228	0.56	-0.0
9,808	+		BACOVA_01228	0.56	-0.7
9,830	+		BACOVA_01228	0.57	+0.6
9,831	-		BACOVA_01228	0.57	+0.1
9,913	+		BACOVA_01228	0.60	-0.4
9,913	+		BACOVA_01228	0.60	-0.3
9,913	+		BACOVA_01228	0.60	+0.7
9,913	+		BACOVA_01228	0.60	-0.9
9,954	-		BACOVA_01228	0.61	-0.5
10,040	+		BACOVA_01228	0.64	-2.0
10,120	+		BACOVA_01228	0.67	+0.5
10,135	+		BACOVA_01228	0.67	-0.0
10,138	+		BACOVA_01228	0.68	-0.7
10,138	+		BACOVA_01228	0.68	-0.5
10,139	-		BACOVA_01228	0.68	+0.7
10,170	+		BACOVA_01228	0.69	+0.9
10,197	-		BACOVA_01228	0.70	-1.1
10,204	+		BACOVA_01228	0.70	-1.7
10,205	-		BACOVA_01228	0.70	-0.6
10,304	+		BACOVA_01228	0.73	-0.3
10,406	+		BACOVA_01228	0.77	-0.8
10,406	+		BACOVA_01228	0.77	-1.1
10,484	+		BACOVA_01228	0.79	-0.3
10,485	-		BACOVA_01228	0.79	+0.8
10,490	+		BACOVA_01228	0.80	-0.3
10,496	+		BACOVA_01228	0.80	-1.5
10,497	-		BACOVA_01228	0.80	+0.8
10,742	+		BACOVA_01228	0.88	-1.5
10,746	+		BACOVA_01228	0.88	-0.6
10,765	-		BACOVA_01228	0.89	-1.3
10,858	+				-0.0
10,875	-				+0.4
10,903	+				-0.2
10,904	-				-0.5
10,904	-				-0.8
10,941	-				+1.1
10,942	-				+0.5
10,979	+				+1.8
10,997	+				-0.6
10,998	-				-1.3
10,998	-				-1.1
10,998	-				-0.2
11,064	+				-0.7
11,065	-				+0.6
11,140	+		BACOVA_01229	0.21	-1.2
11,144	+		BACOVA_01229	0.24	+0.3
11,157	-		BACOVA_01229	0.34	-0.9
11,185	+		BACOVA_01229	0.56	-1.1
11,211	+		BACOVA_01229	0.77	+0.1
11,217	+		BACOVA_01229	0.82	-1.3
11,245	+				+0.3
11,245	+				-0.6
11,245	+				-1.0
11,246	-				+0.1
11,248	+				-0.0
11,249	-				-0.4
11,249	-				-1.1
11,252	+				+0.6
11,260	+				+0.4
11,265	+				-0.5
11,265	+				-0.5
11,276	+				-1.9
11,277	-				+0.7
11,295	+				+0.7
11,369	-				+0.1
11,369	-				+1.1
11,373	+				-0.5
11,388	-				-2.8
11,412	+				+1.8
11,413	-				-1.6
11,413	-				+0.1
11,526	+				-0.2
11,527	-				-0.0
11,527	-				+2.2
11,534	+				+0.7
11,534	+				+0.3
11,534	+				-0.0
11,535	-				+0.5
11,537	-				-0.6
11,561	-				+0.6
11,564	-				-0.6
11,565	+				+0.2
11,581	-				+1.5
11,588	-				-0.2
11,620	-				-0.7
11,642	-				-0.4
11,649	-				-0.3
11,649	-				-0.2
11,716	+				-0.2
11,716	+				-0.3
11,716	+				+0.5
11,716	+				-0.2
11,716	+				+1.5
11,726	+				-1.9
11,731	+				-0.3