Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00076

Experiment: Xylan from corncob 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylan from corncob 2.5 mg/mL (C)
8,711	+		BACOVA_00074	0.79	+1.6
8,712	-		BACOVA_00074	0.79	-0.3
8,752	-		BACOVA_00074	0.82	-0.2
8,854	+		BACOVA_00074	0.89	-0.1
8,882	+				+0.4
8,882	+				+0.7
8,883	-				-1.0
8,946	-				+0.5
8,971	-				-0.9
8,992	-				-0.7
8,999	+				-0.4
9,014	+				-0.1
9,015	-				+1.2
9,034	+				+1.4
9,035	-				-0.4
9,036	+				+0.1
9,036	+				+1.2
9,037	-				+0.4
9,038	+				+0.9
9,039	-				+0.1
9,039	-				-0.8
9,042	+				-0.1
9,042	+				-0.5
9,042	+				+0.6
9,043	-				+0.7
9,043	-				+0.2
9,043	-				-0.8
9,044	+				-0.4
9,045	-				+0.6
9,046	+				+0.8
9,046	+				-1.5
9,109	-				-0.2
9,184	+		BACOVA_00075	0.14	-0.4
9,187	+		BACOVA_00075	0.14	-1.3
9,397	-		BACOVA_00075	0.49	-0.7
9,421	+		BACOVA_00075	0.53	-0.8
9,422	-		BACOVA_00075	0.53	+0.2
9,428	-		BACOVA_00075	0.54	+1.5
9,503	-		BACOVA_00075	0.66	+0.6
9,503	-		BACOVA_00075	0.66	-0.8
9,708	+				+0.8
9,709	-				-0.3
9,752	-				+0.7
9,795	+				-1.1
9,796	-				+0.1
9,825	+				+0.5
9,917	+		BACOVA_00076	0.12	-0.9
10,103	+		BACOVA_00076	0.22	-1.2
10,104	-		BACOVA_00076	0.22	+0.5
10,116	+		BACOVA_00076	0.23	-3.1
10,117	-		BACOVA_00076	0.23	+0.3
10,117	-		BACOVA_00076	0.23	-0.4
10,135	+		BACOVA_00076	0.24	-0.8
10,136	-		BACOVA_00076	0.24	-0.4
10,160	-		BACOVA_00076	0.25	-0.3
10,182	+		BACOVA_00076	0.26	+0.0
10,183	-		BACOVA_00076	0.26	+0.1
10,192	-		BACOVA_00076	0.27	-0.9
10,268	-		BACOVA_00076	0.31	-0.4
10,460	+		BACOVA_00076	0.42	-0.1
10,461	-		BACOVA_00076	0.42	+0.2
10,499	+		BACOVA_00076	0.44	+1.0
10,499	+		BACOVA_00076	0.44	+0.3
10,507	+		BACOVA_00076	0.44	+0.2
10,508	-		BACOVA_00076	0.44	+0.9
10,526	+		BACOVA_00076	0.45	+1.5
10,526	+		BACOVA_00076	0.45	-0.4
10,526	+		BACOVA_00076	0.45	-1.7
10,526	+		BACOVA_00076	0.45	+0.7
10,526	+		BACOVA_00076	0.45	-1.5
10,527	-		BACOVA_00076	0.45	+0.2
10,527	-		BACOVA_00076	0.45	-1.7
10,527	-		BACOVA_00076	0.45	-0.3
10,532	-		BACOVA_00076	0.46	-1.9
10,584	+		BACOVA_00076	0.48	+1.6
10,617	+		BACOVA_00076	0.50	-1.4
10,617	+		BACOVA_00076	0.50	+1.2
10,618	-		BACOVA_00076	0.50	-0.8
10,624	+		BACOVA_00076	0.51	-0.6
10,625	-		BACOVA_00076	0.51	+0.3
10,625	-		BACOVA_00076	0.51	-1.7
10,641	+		BACOVA_00076	0.52	+0.2
10,641	+		BACOVA_00076	0.52	-0.4
10,642	-		BACOVA_00076	0.52	-0.5
10,805	+		BACOVA_00076	0.61	-1.7
10,852	-		BACOVA_00076	0.63	-0.7
10,852	-		BACOVA_00076	0.63	-1.2
10,852	-		BACOVA_00076	0.63	-0.3
10,869	+		BACOVA_00076	0.64	-0.7
10,935	+		BACOVA_00076	0.68	+0.5
10,936	-		BACOVA_00076	0.68	+0.2
10,936	-		BACOVA_00076	0.68	-0.3
11,099	+		BACOVA_00076	0.77	-0.1
11,115	+		BACOVA_00076	0.78	-0.6
11,116	-		BACOVA_00076	0.78	-1.2
11,152	-		BACOVA_00076	0.80	+1.0
11,164	+		BACOVA_00076	0.80	-0.1
11,165	-		BACOVA_00076	0.80	-0.6
11,165	-		BACOVA_00076	0.80	+0.5
11,221	+		BACOVA_00076	0.83	+0.0
11,221	+		BACOVA_00076	0.83	+1.7
11,222	-		BACOVA_00076	0.84	+0.2
11,223	+		BACOVA_00076	0.84	-0.4
11,227	-		BACOVA_00076	0.84	-0.3
11,309	+		BACOVA_00076	0.88	-0.8
11,327	+		BACOVA_00076	0.89	-0.6
11,332	-		BACOVA_00076	0.90	-0.0
11,343	+				-0.1
11,348	+				-1.7
11,349	-				-0.1
11,349	-				-0.1
11,351	+				-0.7
11,367	+				+0.9
11,404	-				+0.2
11,410	-				-0.4
11,558	-				-1.2
11,576	+				+0.2
11,619	+				+0.9
11,668	-		BACOVA_00077	0.16	+1.3
11,678	+		BACOVA_00077	0.18	-1.3
11,687	+		BACOVA_00077	0.20	-1.1
11,791	-		BACOVA_00077	0.42	-1.0
11,835	-		BACOVA_00077	0.52	+0.2
11,840	+		BACOVA_00077	0.53	-1.4
11,962	+		BACOVA_00077	0.79	-0.7
11,963	-		BACOVA_00077	0.79	+0.4
11,966	+		BACOVA_00077	0.80	-1.4
11,966	+		BACOVA_00077	0.80	-0.5
11,973	-		BACOVA_00077	0.81	+0.4
11,990	-		BACOVA_00077	0.85	-0.1
12,073	+				+0.1
12,081	-				-0.6
12,082	+				+0.5
12,104	+		BACOVA_00078	0.10	-0.4
12,104	+		BACOVA_00078	0.10	-1.3
12,105	-		BACOVA_00078	0.11	-1.1
12,196	+		BACOVA_00078	0.89	+0.4
12,213	+				-0.5
12,220	+				-0.3
12,240	-				+0.6
12,254	+				+0.2
12,259	+				+0.7
12,261	+				-0.2
12,267	-				+0.6
12,314	+				+0.4
12,318	+				-0.6
12,319	-				+0.5
12,322	-				+0.3
12,335	+				+0.8
12,337	+				-0.1
12,337	+				+0.1
12,337	+				+0.9
12,338	-				-0.7
12,338	-				-0.7
12,338	-				-0.3
12,338	-				-0.2
12,437	+		BACOVA_00079	0.11	+0.9
12,438	-		BACOVA_00079	0.11	+0.2
12,458	+		BACOVA_00079	0.12	-2.7
12,458	+		BACOVA_00079	0.12	-0.7
12,458	+		BACOVA_00079	0.12	-0.1
12,458	+		BACOVA_00079	0.12	-0.1
12,458	+		BACOVA_00079	0.12	+0.3
12,458	+		BACOVA_00079	0.12	+0.4
12,458	+		BACOVA_00079	0.12	+0.7
12,459	-		BACOVA_00079	0.12	-0.4
12,459	-		BACOVA_00079	0.12	+1.2