Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03170 and MPMX26_03171 are separated by 263 nucleotides MPMX26_03171 and MPMX26_03172 are separated by 39 nucleotides MPMX26_03172 and MPMX26_03173 are separated by 27 nucleotides
MPMX26_03170: MPMX26_03170 - IS6 family transposase IS1006, at 26,618 to 27,322
_03170
MPMX26_03171: MPMX26_03171 - Diacylglycerol kinase, at 27,586 to 27,972
_03171
MPMX26_03172: MPMX26_03172 - hypothetical protein, at 28,012 to 28,722
_03172
MPMX26_03173: MPMX26_03173 - Sensor protein QseC, at 28,750 to 30,063
_03173
Position (kb) 27
28 Strain fitness (log2 ratio) -1
0
1
2 at 26.604 kb on - strand at 26.609 kb on - strand at 26.766 kb on + strand, within MPMX26_03170 at 26.768 kb on + strand, within MPMX26_03170 at 26.776 kb on - strand, within MPMX26_03170 at 26.781 kb on - strand, within MPMX26_03170 at 26.822 kb on - strand, within MPMX26_03170 at 27.360 kb on + strand at 27.816 kb on + strand, within MPMX26_03171 at 27.816 kb on + strand, within MPMX26_03171 at 27.863 kb on + strand, within MPMX26_03171 at 27.888 kb on + strand, within MPMX26_03171 at 27.889 kb on + strand, within MPMX26_03171 at 27.889 kb on + strand, within MPMX26_03171 at 27.889 kb on + strand, within MPMX26_03171 at 27.889 kb on + strand, within MPMX26_03171 at 27.889 kb on + strand, within MPMX26_03171 at 27.894 kb on + strand, within MPMX26_03171 at 27.897 kb on - strand, within MPMX26_03171 at 27.931 kb on + strand, within MPMX26_03171 at 27.937 kb on + strand at 27.939 kb on - strand at 27.939 kb on - strand at 28.095 kb on + strand, within MPMX26_03172 at 28.105 kb on + strand, within MPMX26_03172 at 28.187 kb on - strand, within MPMX26_03172 at 28.222 kb on + strand, within MPMX26_03172 at 28.224 kb on + strand, within MPMX26_03172 at 28.224 kb on + strand, within MPMX26_03172 at 28.232 kb on + strand, within MPMX26_03172 at 28.321 kb on - strand, within MPMX26_03172 at 28.333 kb on - strand, within MPMX26_03172 at 28.360 kb on + strand, within MPMX26_03172 at 28.360 kb on + strand, within MPMX26_03172 at 28.360 kb on + strand, within MPMX26_03172 at 28.360 kb on + strand, within MPMX26_03172 at 28.360 kb on + strand, within MPMX26_03172 at 28.360 kb on + strand, within MPMX26_03172 at 28.426 kb on + strand, within MPMX26_03172 at 28.445 kb on - strand, within MPMX26_03172 at 28.566 kb on - strand, within MPMX26_03172 at 28.622 kb on + strand, within MPMX26_03172 at 28.667 kb on - strand at 28.699 kb on - strand at 28.699 kb on - strand at 28.777 kb on - strand at 28.777 kb on - strand at 28.779 kb on - strand at 28.797 kb on + strand at 28.805 kb on - strand at 28.826 kb on + strand at 28.866 kb on - strand at 28.866 kb on - strand at 28.911 kb on - strand, within MPMX26_03173 at 28.921 kb on - strand, within MPMX26_03173 at 28.932 kb on + strand, within MPMX26_03173 at 28.945 kb on - strand, within MPMX26_03173 at 28.945 kb on - strand, within MPMX26_03173 at 28.945 kb on - strand, within MPMX26_03173 at 28.945 kb on - strand, within MPMX26_03173 at 28.947 kb on + strand, within MPMX26_03173 at 28.947 kb on - strand, within MPMX26_03173 at 28.947 kb on - strand, within MPMX26_03173 at 28.947 kb on - strand, within MPMX26_03173 at 28.947 kb on - strand, within MPMX26_03173 at 28.947 kb on - strand, within MPMX26_03173 at 28.957 kb on - strand, within MPMX26_03173 at 28.965 kb on - strand, within MPMX26_03173
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 26,604 - +0.5 26,609 - +0.8 26,766 + MPMX26_03170 0.21 +0.9 26,768 + MPMX26_03170 0.21 -0.3 26,776 - MPMX26_03170 0.22 +0.5 26,781 - MPMX26_03170 0.23 +1.0 26,822 - MPMX26_03170 0.29 +1.9 27,360 + +1.1 27,816 + MPMX26_03171 0.59 -0.5 27,816 + MPMX26_03171 0.59 +0.0 27,863 + MPMX26_03171 0.72 +0.3 27,888 + MPMX26_03171 0.78 +0.3 27,889 + MPMX26_03171 0.78 +2.1 27,889 + MPMX26_03171 0.78 +0.1 27,889 + MPMX26_03171 0.78 +0.1 27,889 + MPMX26_03171 0.78 +1.9 27,889 + MPMX26_03171 0.78 +1.1 27,894 + MPMX26_03171 0.80 +0.5 27,897 - MPMX26_03171 0.80 -0.6 27,931 + MPMX26_03171 0.89 +1.8 27,937 + +0.5 27,939 - +0.3 27,939 - -0.3 28,095 + MPMX26_03172 0.12 +0.8 28,105 + MPMX26_03172 0.13 -1.6 28,187 - MPMX26_03172 0.25 +2.1 28,222 + MPMX26_03172 0.30 +0.8 28,224 + MPMX26_03172 0.30 +0.8 28,224 + MPMX26_03172 0.30 -0.5 28,232 + MPMX26_03172 0.31 +0.4 28,321 - MPMX26_03172 0.43 +1.5 28,333 - MPMX26_03172 0.45 +2.1 28,360 + MPMX26_03172 0.49 +1.5 28,360 + MPMX26_03172 0.49 +1.5 28,360 + MPMX26_03172 0.49 +1.5 28,360 + MPMX26_03172 0.49 +1.7 28,360 + MPMX26_03172 0.49 +0.7 28,360 + MPMX26_03172 0.49 +0.9 28,426 + MPMX26_03172 0.58 +0.5 28,445 - MPMX26_03172 0.61 +1.1 28,566 - MPMX26_03172 0.78 -0.3 28,622 + MPMX26_03172 0.86 -0.9 28,667 - +0.8 28,699 - +0.3 28,699 - +1.1 28,777 - +0.9 28,777 - +1.5 28,779 - +0.8 28,797 + +1.5 28,805 - +1.8 28,826 + +1.5 28,866 - +1.1 28,866 - +0.1 28,911 - MPMX26_03173 0.12 +1.5 28,921 - MPMX26_03173 0.13 -0.3 28,932 + MPMX26_03173 0.14 +0.2 28,945 - MPMX26_03173 0.15 -1.0 28,945 - MPMX26_03173 0.15 +0.9 28,945 - MPMX26_03173 0.15 +0.8 28,945 - MPMX26_03173 0.15 +1.3 28,947 + MPMX26_03173 0.15 +0.5 28,947 - MPMX26_03173 0.15 -0.6 28,947 - MPMX26_03173 0.15 +0.3 28,947 - MPMX26_03173 0.15 +0.9 28,947 - MPMX26_03173 0.15 +1.5 28,947 - MPMX26_03173 0.15 +0.4 28,957 - MPMX26_03173 0.16 +0.4 28,965 - MPMX26_03173 0.16 +0.8
Or see this region's nucleotide sequence