Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02827 and MPMX26_02828 are separated by 56 nucleotides MPMX26_02828 and MPMX26_02829 are separated by 33 nucleotides MPMX26_02829 and MPMX26_02830 are separated by 106 nucleotides MPMX26_02830 and MPMX26_02831 are separated by 13 nucleotides
MPMX26_02827: MPMX26_02827 - Glutamate--tRNA ligase, at 2,916,229 to 2,917,740
_02827
MPMX26_02828: MPMX26_02828 - tRNA-Ala, at 2,917,797 to 2,917,872
_02828
MPMX26_02829: MPMX26_02829 - tRNA-Glu, at 2,917,906 to 2,917,981
_02829
MPMX26_02830: MPMX26_02830 - hypothetical protein, at 2,918,088 to 2,918,426
_02830
MPMX26_02831: MPMX26_02831 - Metal cation efflux system protein CzcD, at 2,918,440 to 2,919,366
_02831
Position (kb)
2917
2918 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2917.727 kb on + strand at 2917.761 kb on + strand at 2917.770 kb on + strand at 2917.787 kb on + strand at 2917.793 kb on + strand at 2917.793 kb on + strand at 2917.799 kb on + strand at 2917.799 kb on + strand at 2917.799 kb on + strand at 2917.806 kb on + strand, within MPMX26_02828 at 2917.809 kb on + strand, within MPMX26_02828 at 2917.831 kb on + strand, within MPMX26_02828 at 2917.831 kb on + strand, within MPMX26_02828 at 2917.836 kb on + strand, within MPMX26_02828 at 2917.836 kb on + strand, within MPMX26_02828 at 2917.841 kb on + strand, within MPMX26_02828 at 2917.841 kb on + strand, within MPMX26_02828 at 2917.857 kb on + strand, within MPMX26_02828 at 2917.869 kb on + strand at 2917.879 kb on + strand at 2917.879 kb on + strand at 2917.879 kb on + strand at 2917.958 kb on + strand, within MPMX26_02829 at 2917.958 kb on + strand, within MPMX26_02829 at 2917.958 kb on + strand, within MPMX26_02829 at 2917.993 kb on + strand at 2917.993 kb on + strand at 2917.993 kb on + strand at 2917.998 kb on + strand at 2917.998 kb on + strand at 2917.998 kb on + strand at 2917.998 kb on + strand at 2917.998 kb on + strand at 2918.000 kb on + strand at 2918.118 kb on + strand at 2918.123 kb on + strand, within MPMX26_02830 at 2918.123 kb on + strand, within MPMX26_02830 at 2918.123 kb on + strand, within MPMX26_02830 at 2918.130 kb on + strand, within MPMX26_02830 at 2918.153 kb on + strand, within MPMX26_02830 at 2918.216 kb on + strand, within MPMX26_02830 at 2918.220 kb on + strand, within MPMX26_02830 at 2918.230 kb on + strand, within MPMX26_02830 at 2918.230 kb on + strand, within MPMX26_02830 at 2918.259 kb on + strand, within MPMX26_02830 at 2918.261 kb on + strand, within MPMX26_02830 at 2918.261 kb on + strand, within MPMX26_02830 at 2918.344 kb on + strand, within MPMX26_02830 at 2918.344 kb on + strand, within MPMX26_02830 at 2918.344 kb on + strand, within MPMX26_02830 at 2918.344 kb on + strand, within MPMX26_02830 at 2918.344 kb on + strand, within MPMX26_02830 at 2918.345 kb on + strand, within MPMX26_02830 at 2918.395 kb on + strand at 2918.395 kb on + strand at 2918.395 kb on + strand at 2918.420 kb on + strand at 2918.449 kb on + strand at 2918.451 kb on + strand at 2918.470 kb on + strand at 2918.489 kb on + strand at 2918.489 kb on + strand at 2918.532 kb on + strand at 2918.532 kb on + strand at 2918.539 kb on + strand, within MPMX26_02831 at 2918.649 kb on + strand, within MPMX26_02831 at 2918.667 kb on - strand, within MPMX26_02831 at 2918.826 kb on - strand, within MPMX26_02831
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,917,727 + +0.5 2,917,761 + +0.3 2,917,770 + +0.1 2,917,787 + -0.4 2,917,793 + +0.0 2,917,793 + +0.4 2,917,799 + -0.5 2,917,799 + -0.9 2,917,799 + +0.0 2,917,806 + MPMX26_02828 0.12 -0.0 2,917,809 + MPMX26_02828 0.16 -0.5 2,917,831 + MPMX26_02828 0.45 -0.3 2,917,831 + MPMX26_02828 0.45 -0.2 2,917,836 + MPMX26_02828 0.51 -1.6 2,917,836 + MPMX26_02828 0.51 -0.1 2,917,841 + MPMX26_02828 0.58 +0.6 2,917,841 + MPMX26_02828 0.58 +0.2 2,917,857 + MPMX26_02828 0.79 +0.5 2,917,869 + +0.0 2,917,879 + -0.6 2,917,879 + -0.1 2,917,879 + -0.1 2,917,958 + MPMX26_02829 0.68 -0.5 2,917,958 + MPMX26_02829 0.68 -1.0 2,917,958 + MPMX26_02829 0.68 -0.0 2,917,993 + -0.2 2,917,993 + -0.9 2,917,993 + +0.0 2,917,998 + -0.2 2,917,998 + +0.8 2,917,998 + -0.6 2,917,998 + -0.6 2,917,998 + -0.5 2,918,000 + -0.1 2,918,118 + -0.5 2,918,123 + MPMX26_02830 0.10 -0.6 2,918,123 + MPMX26_02830 0.10 -0.3 2,918,123 + MPMX26_02830 0.10 +0.3 2,918,130 + MPMX26_02830 0.12 +1.6 2,918,153 + MPMX26_02830 0.19 -0.3 2,918,216 + MPMX26_02830 0.38 -0.1 2,918,220 + MPMX26_02830 0.39 -0.0 2,918,230 + MPMX26_02830 0.42 +1.2 2,918,230 + MPMX26_02830 0.42 -0.4 2,918,259 + MPMX26_02830 0.50 -0.8 2,918,261 + MPMX26_02830 0.51 -0.7 2,918,261 + MPMX26_02830 0.51 +0.5 2,918,344 + MPMX26_02830 0.76 +0.2 2,918,344 + MPMX26_02830 0.76 -1.4 2,918,344 + MPMX26_02830 0.76 -0.7 2,918,344 + MPMX26_02830 0.76 -0.3 2,918,344 + MPMX26_02830 0.76 -2.2 2,918,345 + MPMX26_02830 0.76 -0.5 2,918,395 + +0.4 2,918,395 + -0.2 2,918,395 + -0.0 2,918,420 + -0.1 2,918,449 + -0.2 2,918,451 + -0.7 2,918,470 + -0.4 2,918,489 + +0.1 2,918,489 + +0.9 2,918,532 + -0.0 2,918,532 + +1.9 2,918,539 + MPMX26_02831 0.11 +0.5 2,918,649 + MPMX26_02831 0.23 +0.2 2,918,667 - MPMX26_02831 0.24 -1.0 2,918,826 - MPMX26_02831 0.42 +1.2
Or see this region's nucleotide sequence