Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02339

Experiment: L-Phenylalanine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02338 and MPMX26_02339 overlap by 20 nucleotidesMPMX26_02339 and MPMX26_02340 are separated by 12 nucleotidesMPMX26_02340 and MPMX26_02341 are separated by 54 nucleotides MPMX26_02338: MPMX26_02338 - hypothetical protein, at 2,412,648 to 2,415,128 _02338 MPMX26_02339: MPMX26_02339 - ABC transporter ATP-binding protein YtrE, at 2,415,109 to 2,415,855 _02339 MPMX26_02340: MPMX26_02340 - Esterase TesA, at 2,415,868 to 2,416,497 _02340 MPMX26_02341: MPMX26_02341 - Carbonic anhydrase, at 2,416,552 to 2,417,166 _02341 Position (kb) 2415 2416Strain fitness (log2 ratio) -1 0 1 2at 2415.190 kb on - strand, within MPMX26_02339at 2415.190 kb on - strand, within MPMX26_02339at 2415.427 kb on - strand, within MPMX26_02339at 2415.438 kb on - strand, within MPMX26_02339at 2415.646 kb on - strand, within MPMX26_02339at 2415.646 kb on - strand, within MPMX26_02339at 2415.657 kb on - strand, within MPMX26_02339at 2415.712 kb on - strand, within MPMX26_02339at 2415.921 kb on + strandat 2416.042 kb on + strand, within MPMX26_02340at 2416.098 kb on + strand, within MPMX26_02340at 2416.098 kb on + strand, within MPMX26_02340at 2416.170 kb on + strand, within MPMX26_02340at 2416.201 kb on + strand, within MPMX26_02340at 2416.312 kb on + strand, within MPMX26_02340at 2416.405 kb on + strand, within MPMX26_02340at 2416.431 kb on + strand, within MPMX26_02340at 2416.444 kb on + strandat 2416.444 kb on + strandat 2416.461 kb on + strandat 2416.708 kb on - strand, within MPMX26_02341

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
remove
2,415,190 - MPMX26_02339 0.11 +0.9
2,415,190 - MPMX26_02339 0.11 +0.2
2,415,427 - MPMX26_02339 0.43 +0.2
2,415,438 - MPMX26_02339 0.44 +0.3
2,415,646 - MPMX26_02339 0.72 -1.0
2,415,646 - MPMX26_02339 0.72 +1.9
2,415,657 - MPMX26_02339 0.73 +0.1
2,415,712 - MPMX26_02339 0.81 +1.0
2,415,921 + +0.2
2,416,042 + MPMX26_02340 0.28 +0.4
2,416,098 + MPMX26_02340 0.37 +0.1
2,416,098 + MPMX26_02340 0.37 -0.5
2,416,170 + MPMX26_02340 0.48 +0.6
2,416,201 + MPMX26_02340 0.53 -0.0
2,416,312 + MPMX26_02340 0.70 +0.0
2,416,405 + MPMX26_02340 0.85 +0.0
2,416,431 + MPMX26_02340 0.89 +0.1
2,416,444 + +0.7
2,416,444 + +0.4
2,416,461 + -0.0
2,416,708 - MPMX26_02341 0.25 +1.7

Or see this region's nucleotide sequence