Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01896

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01894 and MPMX26_01895 are separated by 16 nucleotidesMPMX26_01895 and MPMX26_01896 are separated by 27 nucleotidesMPMX26_01896 and MPMX26_01897 are separated by 253 nucleotides MPMX26_01894: MPMX26_01894 - hypothetical protein, at 1,936,788 to 1,937,855 _01894 MPMX26_01895: MPMX26_01895 - hypothetical protein, at 1,937,872 to 1,938,171 _01895 MPMX26_01896: MPMX26_01896 - Naphthalene 1,2-dioxygenase system, ferredoxin component, at 1,938,199 to 1,938,504 _01896 MPMX26_01897: MPMX26_01897 - hypothetical protein, at 1,938,758 to 1,939,570 _01897 Position (kb) 1938 1939Strain fitness (log2 ratio) -1 0 1at 1937.599 kb on - strand, within MPMX26_01894at 1938.772 kb on + strandat 1938.772 kb on + strandat 1938.782 kb on + strandat 1938.782 kb on + strandat 1938.783 kb on + strandat 1938.790 kb on + strandat 1938.830 kb on + strandat 1938.830 kb on + strandat 1938.835 kb on + strandat 1938.836 kb on + strandat 1938.861 kb on + strand, within MPMX26_01897at 1938.861 kb on + strand, within MPMX26_01897at 1938.914 kb on + strand, within MPMX26_01897at 1938.916 kb on + strand, within MPMX26_01897at 1938.933 kb on + strand, within MPMX26_01897at 1938.943 kb on + strand, within MPMX26_01897at 1938.951 kb on + strand, within MPMX26_01897at 1938.951 kb on + strand, within MPMX26_01897at 1938.993 kb on + strand, within MPMX26_01897at 1939.039 kb on + strand, within MPMX26_01897at 1939.092 kb on + strand, within MPMX26_01897at 1939.157 kb on + strand, within MPMX26_01897at 1939.157 kb on + strand, within MPMX26_01897at 1939.157 kb on + strand, within MPMX26_01897at 1939.157 kb on + strand, within MPMX26_01897at 1939.162 kb on + strand, within MPMX26_01897at 1939.185 kb on + strand, within MPMX26_01897at 1939.185 kb on + strand, within MPMX26_01897at 1939.185 kb on + strand, within MPMX26_01897at 1939.211 kb on + strand, within MPMX26_01897at 1939.215 kb on + strand, within MPMX26_01897at 1939.263 kb on + strand, within MPMX26_01897at 1939.265 kb on + strand, within MPMX26_01897at 1939.286 kb on + strand, within MPMX26_01897at 1939.319 kb on + strand, within MPMX26_01897at 1939.416 kb on + strand, within MPMX26_01897at 1939.437 kb on + strand, within MPMX26_01897at 1939.471 kb on + strand, within MPMX26_01897at 1939.471 kb on + strand, within MPMX26_01897at 1939.478 kb on + strand, within MPMX26_01897at 1939.480 kb on + strand, within MPMX26_01897at 1939.481 kb on + strand, within MPMX26_01897

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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1,937,599 - MPMX26_01894 0.76 -1.2
1,938,772 + +0.9
1,938,772 + -0.2
1,938,782 + +0.0
1,938,782 + -0.4
1,938,783 + +0.5
1,938,790 + -0.9
1,938,830 + -0.5
1,938,830 + -0.1
1,938,835 + -0.2
1,938,836 + -0.2
1,938,861 + MPMX26_01897 0.13 +1.0
1,938,861 + MPMX26_01897 0.13 -0.1
1,938,914 + MPMX26_01897 0.19 -0.1
1,938,916 + MPMX26_01897 0.19 -1.1
1,938,933 + MPMX26_01897 0.22 +0.5
1,938,943 + MPMX26_01897 0.23 +0.2
1,938,951 + MPMX26_01897 0.24 +0.1
1,938,951 + MPMX26_01897 0.24 +0.6
1,938,993 + MPMX26_01897 0.29 +0.2
1,939,039 + MPMX26_01897 0.35 -0.5
1,939,092 + MPMX26_01897 0.41 -0.1
1,939,157 + MPMX26_01897 0.49 +0.5
1,939,157 + MPMX26_01897 0.49 -0.8
1,939,157 + MPMX26_01897 0.49 +0.3
1,939,157 + MPMX26_01897 0.49 +0.3
1,939,162 + MPMX26_01897 0.50 +0.2
1,939,185 + MPMX26_01897 0.53 +0.0
1,939,185 + MPMX26_01897 0.53 +0.7
1,939,185 + MPMX26_01897 0.53 -0.4
1,939,211 + MPMX26_01897 0.56 -0.8
1,939,215 + MPMX26_01897 0.56 -0.2
1,939,263 + MPMX26_01897 0.62 -0.3
1,939,265 + MPMX26_01897 0.62 +0.7
1,939,286 + MPMX26_01897 0.65 -0.2
1,939,319 + MPMX26_01897 0.69 -0.2
1,939,416 + MPMX26_01897 0.81 -0.0
1,939,437 + MPMX26_01897 0.84 -0.1
1,939,471 + MPMX26_01897 0.88 -0.2
1,939,471 + MPMX26_01897 0.88 -0.2
1,939,478 + MPMX26_01897 0.89 -1.0
1,939,480 + MPMX26_01897 0.89 -0.0
1,939,481 + MPMX26_01897 0.89 -1.1

Or see this region's nucleotide sequence