Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01479

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01478 and MPMX26_01479 are separated by 346 nucleotidesMPMX26_01479 and MPMX26_01480 are separated by 70 nucleotides MPMX26_01478: MPMX26_01478 - Staphylopine export protein, at 1,534,864 to 1,535,985 _01478 MPMX26_01479: MPMX26_01479 - Glycine cleavage system H protein, at 1,536,332 to 1,536,706 _01479 MPMX26_01480: MPMX26_01480 - putative HTH-type transcriptional regulator, at 1,536,777 to 1,537,805 _01480 Position (kb) 1536 1537Strain fitness (log2 ratio) -1 0 1at 1536.379 kb on - strand, within MPMX26_01479at 1536.451 kb on - strand, within MPMX26_01479at 1536.451 kb on - strand, within MPMX26_01479at 1536.455 kb on - strand, within MPMX26_01479at 1536.460 kb on - strand, within MPMX26_01479at 1536.468 kb on - strand, within MPMX26_01479at 1536.538 kb on - strand, within MPMX26_01479at 1536.542 kb on - strand, within MPMX26_01479at 1536.542 kb on - strand, within MPMX26_01479at 1536.542 kb on - strand, within MPMX26_01479at 1536.560 kb on - strand, within MPMX26_01479at 1536.560 kb on - strand, within MPMX26_01479at 1536.560 kb on - strand, within MPMX26_01479at 1536.593 kb on - strand, within MPMX26_01479at 1536.691 kb on - strandat 1536.899 kb on - strand, within MPMX26_01480at 1537.007 kb on - strand, within MPMX26_01480

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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1,536,379 - MPMX26_01479 0.13 +0.1
1,536,451 - MPMX26_01479 0.32 -0.3
1,536,451 - MPMX26_01479 0.32 +0.9
1,536,455 - MPMX26_01479 0.33 +0.3
1,536,460 - MPMX26_01479 0.34 -0.5
1,536,468 - MPMX26_01479 0.36 +0.4
1,536,538 - MPMX26_01479 0.55 +0.3
1,536,542 - MPMX26_01479 0.56 +0.5
1,536,542 - MPMX26_01479 0.56 -0.1
1,536,542 - MPMX26_01479 0.56 +0.1
1,536,560 - MPMX26_01479 0.61 +0.6
1,536,560 - MPMX26_01479 0.61 -0.2
1,536,560 - MPMX26_01479 0.61 -0.1
1,536,593 - MPMX26_01479 0.70 -0.1
1,536,691 - +0.2
1,536,899 - MPMX26_01480 0.12 +0.1
1,537,007 - MPMX26_01480 0.22 -0.3

Or see this region's nucleotide sequence