Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01123 and MPMX26_01124 are separated by 131 nucleotides MPMX26_01124 and MPMX26_01125 are separated by 21 nucleotides
MPMX26_01123: MPMX26_01123 - Protease HtpX, at 1,191,969 to 1,193,858
_01123
MPMX26_01124: MPMX26_01124 - hypothetical protein, at 1,193,990 to 1,194,664
_01124
MPMX26_01125: MPMX26_01125 - Glyoxylate/hydroxypyruvate reductase B, at 1,194,686 to 1,195,657
_01125
Position (kb)
1193
1194
1195 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1193.562 kb on - strand, within MPMX26_01123 at 1194.722 kb on + strand at 1194.803 kb on + strand, within MPMX26_01125 at 1194.856 kb on + strand, within MPMX26_01125 at 1194.856 kb on + strand, within MPMX26_01125 at 1194.862 kb on + strand, within MPMX26_01125 at 1194.979 kb on + strand, within MPMX26_01125 at 1195.042 kb on + strand, within MPMX26_01125 at 1195.042 kb on + strand, within MPMX26_01125 at 1195.066 kb on + strand, within MPMX26_01125 at 1195.069 kb on + strand, within MPMX26_01125 at 1195.166 kb on + strand, within MPMX26_01125 at 1195.222 kb on + strand, within MPMX26_01125 at 1195.337 kb on + strand, within MPMX26_01125 at 1195.369 kb on + strand, within MPMX26_01125 at 1195.379 kb on + strand, within MPMX26_01125 at 1195.416 kb on + strand, within MPMX26_01125 at 1195.421 kb on + strand, within MPMX26_01125 at 1195.426 kb on + strand, within MPMX26_01125 at 1195.426 kb on + strand, within MPMX26_01125 at 1195.505 kb on + strand, within MPMX26_01125 at 1195.505 kb on + strand, within MPMX26_01125 at 1195.505 kb on + strand, within MPMX26_01125 at 1195.529 kb on + strand, within MPMX26_01125 at 1195.589 kb on + strand at 1195.589 kb on + strand at 1195.589 kb on + strand at 1195.589 kb on + strand at 1195.606 kb on + strand at 1195.636 kb on + strand at 1195.636 kb on + strand at 1195.636 kb on + strand at 1195.636 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 1,193,562 - MPMX26_01123 0.84 -1.2 1,194,722 + -1.9 1,194,803 + MPMX26_01125 0.12 -1.1 1,194,856 + MPMX26_01125 0.17 -0.5 1,194,856 + MPMX26_01125 0.17 +0.4 1,194,862 + MPMX26_01125 0.18 -0.0 1,194,979 + MPMX26_01125 0.30 -0.9 1,195,042 + MPMX26_01125 0.37 +0.5 1,195,042 + MPMX26_01125 0.37 -1.3 1,195,066 + MPMX26_01125 0.39 +0.7 1,195,069 + MPMX26_01125 0.39 -1.0 1,195,166 + MPMX26_01125 0.49 -0.7 1,195,222 + MPMX26_01125 0.55 +0.4 1,195,337 + MPMX26_01125 0.67 +0.3 1,195,369 + MPMX26_01125 0.70 +2.5 1,195,379 + MPMX26_01125 0.71 +0.4 1,195,416 + MPMX26_01125 0.75 +0.8 1,195,421 + MPMX26_01125 0.76 +0.0 1,195,426 + MPMX26_01125 0.76 +0.2 1,195,426 + MPMX26_01125 0.76 +0.2 1,195,505 + MPMX26_01125 0.84 +0.2 1,195,505 + MPMX26_01125 0.84 -0.6 1,195,505 + MPMX26_01125 0.84 +1.1 1,195,529 + MPMX26_01125 0.87 -0.4 1,195,589 + -0.6 1,195,589 + -0.4 1,195,589 + -0.6 1,195,589 + +0.1 1,195,606 + -0.7 1,195,636 + -2.0 1,195,636 + +1.2 1,195,636 + +0.4 1,195,636 + +0.1
Or see this region's nucleotide sequence