Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5752

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
2,775,611	+		GFF5751	0.34	-0.1
2,775,612	-		GFF5751	0.34	+0.8
2,775,753	-		GFF5751	0.49	-0.6
2,775,831	-		GFF5751	0.57	-0.7
2,775,936	-		GFF5751	0.68	-1.2
2,776,137	-		GFF5751	0.89	+0.2
2,776,178	+				-0.5
2,776,178	+				-0.7
2,776,179	-				-0.1
2,776,711	+		GFF5752	0.22	+0.2
2,777,068	+		GFF5752	0.39	+0.1
2,777,297	-		GFF5752	0.49	-0.9
2,777,450	-		GFF5752	0.56	+0.7
2,777,494	+		GFF5752	0.58	+0.3
2,777,590	+		GFF5752	0.63	-0.6
2,777,717	-		GFF5752	0.69	+1.4
2,777,917	+		GFF5752	0.78	+0.5
2,777,917	+		GFF5752	0.78	+1.2
2,777,917	+		GFF5752	0.78	+0.1
2,778,007	+		GFF5752	0.82	-0.9
2,778,239	-				+0.1
2,778,262	+				+0.0
2,778,307	+				+0.1
2,778,337	+				-0.0
2,779,281	+				-0.1
2,779,281	+				+0.5