Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2373

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
12,169	-		GFF2372	0.18	-0.1
12,300	+		GFF2372	0.30	+0.4
12,300	+		GFF2372	0.30	-0.3
12,300	+		GFF2372	0.30	-0.0
12,300	+		GFF2372	0.30	-0.1
12,301	-		GFF2372	0.30	+0.0
12,301	-		GFF2372	0.30	-0.2
12,301	-		GFF2372	0.30	-0.3
12,451	-		GFF2372	0.45	+0.2
12,501	+		GFF2372	0.50	+0.2
12,502	-		GFF2372	0.50	-1.7
12,502	-		GFF2372	0.50	+0.0
12,659	-		GFF2372	0.65	+1.4
12,659	-		GFF2372	0.65	+0.2
12,659	-		GFF2372	0.65	+0.3
12,925	-				+0.0
13,000	-				-0.0
14,084	+		GFF2373	0.85	+0.3
14,881	-		GFF2374	0.22	-0.2
14,907	+		GFF2374	0.23	-0.5
14,907	+		GFF2374	0.23	-1.0
15,021	+		GFF2374	0.28	+1.0
15,199	+		GFF2374	0.37	+0.7
15,200	-		GFF2374	0.37	-0.6