Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2337

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
1,222,649	+				-0.1
1,222,649	+				+0.9
1,222,649	+				-0.2
1,222,650	-				+0.6
1,222,653	+				+0.4
1,222,654	-				-0.1
1,222,765	+				-0.8
1,222,765	+				+1.1
1,222,766	-				+0.2
1,222,766	-				+0.2
1,222,766	-				-0.3
1,222,798	+				+0.1
1,222,799	-				+0.2
1,222,811	+				+0.4
1,222,812	-				-0.5
1,222,927	+				+0.3
1,222,927	+				-0.3
1,222,927	+				+0.6
1,222,928	-				-0.4
1,222,937	+				-0.1
1,223,014	-				+0.2
1,223,014	-				+0.6
1,223,014	-				-1.1
1,223,046	-				+0.3
1,223,046	-				+0.8
1,223,046	-				+0.1
1,223,115	+				-0.6
1,223,115	+				-0.8
1,223,194	+				-0.5
1,223,195	-				-0.8
1,223,203	+				-0.3
1,223,204	-				+0.2
1,223,246	-				-0.2
1,223,246	-				+1.2
1,223,276	+				-0.6
1,223,277	-				+1.2
1,223,277	-				+0.3
1,223,380	+				+0.9
1,223,380	+				-0.6
1,223,380	+				-0.5
1,223,380	+				+1.3
1,223,380	+				-0.8
1,223,380	+				+0.2
1,223,381	-				-0.3
1,223,387	+				+0.7
1,223,388	-				-0.2
1,223,388	-				+0.3
1,223,424	-				+1.5
1,223,432	+				+1.2
1,223,432	+				-0.6
1,223,433	-				+0.2
1,223,445	+				-0.5
1,223,445	+				+0.4
1,223,445	+				+2.0
1,223,446	-				+1.5
1,223,446	-				-0.1
1,223,446	-				-0.2
1,223,446	-				+0.8
1,223,591	-				+0.1
1,223,605	+				-0.3
1,223,605	+				-0.1
1,223,605	+				+0.2
1,223,605	+				+0.3
1,223,605	+				-0.5
1,223,605	+				-0.4
1,223,605	+				-0.2
1,223,605	+				+0.2
1,223,605	+				-0.0
1,223,606	-				-0.0
1,223,606	-				-0.8
1,223,606	-				+0.5
1,223,610	-				-0.4
1,223,646	+				+0.4
1,223,654	-				+0.3
1,223,654	-				-0.0
1,223,880	-				+0.3
1,223,880	-				-0.2
1,223,979	+				-0.0
1,223,979	+				-0.8
1,223,979	+				+0.1
1,223,979	+				-0.1
1,223,979	+				-0.2
1,223,979	+				+0.3
1,223,979	+				+0.4
1,223,980	-				-0.1
1,223,980	-				-0.7
1,224,062	+				-0.3
1,224,062	+				+1.2
1,224,440	+				+0.1
1,224,440	+				-0.3
1,224,440	+				+0.3
1,224,441	-				+0.1
1,224,441	-				+0.3
1,224,441	-				-0.0
1,224,441	-				+0.4
1,224,569	+				-0.0
1,224,570	-				-0.1