Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2196

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
1,084,496	+				-0.1
1,084,496	+				+0.6
1,084,497	-				-0.1
1,084,838	+		GFF2195	0.36	+0.7
1,084,839	-		GFF2195	0.36	-0.0
1,084,893	-		GFF2195	0.41	-0.2
1,084,970	+		GFF2195	0.49	+0.8
1,084,970	+		GFF2195	0.49	-0.2
1,084,970	+		GFF2195	0.49	+0.5
1,084,971	-		GFF2195	0.49	-0.1
1,084,974	-		GFF2195	0.50	+1.0
1,085,003	+		GFF2195	0.53	-2.1
1,085,082	-		GFF2195	0.61	+0.0
1,085,216	+		GFF2195	0.75	+0.2
1,085,577	+		GFF2196	0.16	-0.7
1,085,577	+		GFF2196	0.16	-0.2
1,085,577	+		GFF2196	0.16	-1.1
1,085,577	+		GFF2196	0.16	-0.2
1,085,577	+		GFF2196	0.16	-0.1
1,085,577	+		GFF2196	0.16	+0.7
1,085,578	-		GFF2196	0.16	+0.6
1,085,937	+		GFF2196	0.63	-1.0
1,085,938	-		GFF2196	0.63	+0.6
1,086,412	+		GFF2197	0.20	-0.3
1,086,412	+		GFF2197	0.20	-0.8
1,086,413	-		GFF2197	0.20	-0.0
1,086,932	-		GFF2197	0.88	-0.2
1,087,047	+				-0.3
1,087,048	-				-0.2
1,087,048	-				-0.2