Strain Fitness in Escherichia fergusonii Becca around EFB2_04720

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
4,968,313	+				+1.3
4,968,313	+				-0.5
4,968,322	+				-1.4
4,968,354	-				+0.2
4,968,355	+				-0.2
4,968,356	-				+1.4
4,968,356	-				-1.2
4,968,467	-				+1.6
4,968,489	-				+0.8
4,968,489	-				+0.8
4,968,529	+				-0.3
4,968,530	-				-1.0
4,968,590	+		EFB2_04718	0.18	-0.1
4,968,591	-		EFB2_04718	0.18	+0.3
4,968,691	+		EFB2_04718	0.43	-0.2
4,968,735	+		EFB2_04718	0.54	+4.6
4,968,875	-		EFB2_04718	0.89	+0.5
4,968,875	-		EFB2_04718	0.89	-0.0
4,968,930	+				+0.8
4,968,931	-				+0.4
4,968,934	-				+1.6
4,968,934	-				+0.6
4,968,998	-				+0.3
4,969,020	+				-2.1
4,969,057	+		EFB2_04719	0.14	-0.4
4,969,121	+		EFB2_04719	0.47	+0.7
4,969,121	+		EFB2_04719	0.47	-0.6
4,969,122	-		EFB2_04719	0.47	+0.6
4,969,122	-		EFB2_04719	0.47	+0.3
4,969,122	-		EFB2_04719	0.47	-0.1
4,969,125	-		EFB2_04719	0.49	-0.1
4,969,125	-		EFB2_04719	0.49	+2.5
4,969,146	+		EFB2_04719	0.59	-1.3
4,969,147	-		EFB2_04719	0.60	-0.4
4,969,147	-		EFB2_04719	0.60	-0.1
4,969,174	-		EFB2_04719	0.74	+0.7
4,969,174	-		EFB2_04719	0.74	-0.6
4,969,174	-		EFB2_04719	0.74	-0.1
4,969,197	+		EFB2_04719	0.86	+0.3
4,969,198	-		EFB2_04719	0.86	+1.4
4,969,198	-		EFB2_04719	0.86	+1.2
4,969,198	-		EFB2_04719	0.86	-0.1
4,969,271	+				+0.8
4,969,289	-				+1.1
4,969,290	+				+0.5
4,969,290	+				+0.6
4,969,290	+				-0.4
4,969,290	+				-1.6
4,969,290	+				+0.4
4,969,290	+				+1.0
4,969,291	-				+1.7
4,969,291	-				-1.1
4,969,291	-				+1.1
4,969,292	+				+1.5
4,969,293	-				+0.9
4,969,293	-				-0.9
4,969,293	-				+1.1
4,969,305	-				-1.0
4,969,305	-				+1.0
4,969,310	-				+1.4
4,969,313	+				-0.6
4,969,313	+				+0.3
4,969,313	+				+0.2
4,969,338	+				+0.1
4,969,338	+				+0.1
4,969,339	-				+1.3
4,969,340	+				-0.4
4,969,340	+				+0.3
4,969,340	+				+0.4
4,969,340	+				-0.7
4,969,340	+				+0.2
4,969,341	-				-0.4
4,969,341	-				-2.7
4,969,362	+				-0.9
4,969,363	-				-0.9
4,969,363	-				+0.4
4,969,386	+				-0.8
4,969,386	+				-0.5
4,969,387	-				-0.3
4,969,405	+		EFB2_04720	0.11	-3.0
4,969,405	+		EFB2_04720	0.11	-1.1
4,969,405	+		EFB2_04720	0.11	-1.4
4,969,405	+		EFB2_04720	0.11	-0.1
4,969,405	+		EFB2_04720	0.11	-2.5
4,969,406	-		EFB2_04720	0.11	+2.6
4,969,406	-		EFB2_04720	0.11	+1.0
4,969,482	-		EFB2_04720	0.20	-0.9
4,969,482	-		EFB2_04720	0.20	-0.6
4,969,482	-		EFB2_04720	0.20	+0.1
4,969,549	+		EFB2_04720	0.28	+0.5
4,969,549	+		EFB2_04720	0.28	-0.0
4,969,549	+		EFB2_04720	0.28	+1.1
4,969,549	+		EFB2_04720	0.28	-4.3
4,969,550	-		EFB2_04720	0.29	-0.0
4,969,550	-		EFB2_04720	0.29	-0.1
4,969,550	-		EFB2_04720	0.29	-0.5
4,969,638	+		EFB2_04720	0.39	-0.7
4,969,638	+		EFB2_04720	0.39	+1.4
4,969,638	+		EFB2_04720	0.39	-2.1
4,969,638	+		EFB2_04720	0.39	-1.0
4,969,638	+		EFB2_04720	0.39	-0.8
4,969,639	-		EFB2_04720	0.39	-0.7
4,969,639	-		EFB2_04720	0.39	+0.4
4,969,639	-		EFB2_04720	0.39	+0.3
4,969,639	-		EFB2_04720	0.39	-0.3
4,969,639	-		EFB2_04720	0.39	-0.2
4,969,639	-		EFB2_04720	0.39	-1.7
4,969,639	-		EFB2_04720	0.39	+0.5
4,969,639	-		EFB2_04720	0.39	-0.0
4,969,639	-		EFB2_04720	0.39	-1.7
4,969,639	-		EFB2_04720	0.39	-2.1
4,969,684	+		EFB2_04720	0.45	-0.6
4,969,684	+		EFB2_04720	0.45	-0.0
4,969,684	+		EFB2_04720	0.45	+0.8
4,969,684	+		EFB2_04720	0.45	+0.3
4,969,684	+		EFB2_04720	0.45	+0.4
4,969,684	+		EFB2_04720	0.45	+1.2
4,969,684	+		EFB2_04720	0.45	-1.2
4,969,684	+		EFB2_04720	0.45	-0.1
4,969,684	+		EFB2_04720	0.45	-0.3
4,969,684	+		EFB2_04720	0.45	-2.5
4,969,684	+		EFB2_04720	0.45	-0.8
4,969,684	+		EFB2_04720	0.45	+0.5
4,969,684	+		EFB2_04720	0.45	-1.6
4,969,684	+		EFB2_04720	0.45	+0.5
4,969,685	-		EFB2_04720	0.45	-1.1
4,969,685	-		EFB2_04720	0.45	-0.5
4,969,685	-		EFB2_04720	0.45	+1.2
4,969,685	-		EFB2_04720	0.45	-1.5
4,969,685	-		EFB2_04720	0.45	-0.3
4,969,685	-		EFB2_04720	0.45	-0.3
4,969,685	-		EFB2_04720	0.45	+0.1
4,969,685	-		EFB2_04720	0.45	-0.7
4,969,685	-		EFB2_04720	0.45	-0.1
4,969,685	-		EFB2_04720	0.45	-1.6
4,969,685	-		EFB2_04720	0.45	+1.0
4,969,685	-		EFB2_04720	0.45	-1.2
4,969,685	-		EFB2_04720	0.45	-0.0
4,969,758	+		EFB2_04720	0.53	-1.6
4,969,758	+		EFB2_04720	0.53	-2.6
4,969,758	+		EFB2_04720	0.53	+1.0
4,969,758	+		EFB2_04720	0.53	-0.7
4,969,758	+		EFB2_04720	0.53	-1.2
4,969,758	+		EFB2_04720	0.53	-1.0
4,969,758	+		EFB2_04720	0.53	+1.2
4,969,758	+		EFB2_04720	0.53	-0.2
4,969,758	+		EFB2_04720	0.53	-1.6
4,969,758	+		EFB2_04720	0.53	+0.2
4,969,759	-		EFB2_04720	0.54	+0.3
4,969,759	-		EFB2_04720	0.54	+1.1
4,969,759	-		EFB2_04720	0.54	+0.8
4,969,759	-		EFB2_04720	0.54	+1.0
4,969,759	-		EFB2_04720	0.54	-0.0
4,969,759	-		EFB2_04720	0.54	+0.2
4,969,759	-		EFB2_04720	0.54	-0.1
4,969,777	+		EFB2_04720	0.56	+0.8
4,969,777	+		EFB2_04720	0.56	-0.3
4,969,777	+		EFB2_04720	0.56	-1.2
4,969,777	+		EFB2_04720	0.56	-1.0
4,969,778	-		EFB2_04720	0.56	+1.6
4,969,778	-		EFB2_04720	0.56	-0.4
4,969,778	-		EFB2_04720	0.56	-1.1
4,969,778	-		EFB2_04720	0.56	-0.7
4,969,778	-		EFB2_04720	0.56	+1.4
4,969,778	-		EFB2_04720	0.56	+1.1
4,969,778	-		EFB2_04720	0.56	+0.1
4,969,791	+		EFB2_04720	0.57	+0.6
4,969,791	+		EFB2_04720	0.57	-0.3
4,969,791	+		EFB2_04720	0.57	-2.5
4,969,831	-		EFB2_04720	0.62	-0.1
4,969,859	-		EFB2_04720	0.66	-0.2
4,969,859	-		EFB2_04720	0.66	+1.4
4,969,902	+		EFB2_04720	0.71	+0.3
4,969,902	+		EFB2_04720	0.71	+0.2
4,969,925	-		EFB2_04720	0.74	-1.0
4,969,955	+		EFB2_04720	0.77	-0.7
4,969,955	+		EFB2_04720	0.77	-1.3
4,969,955	+		EFB2_04720	0.77	-1.4
4,969,955	+		EFB2_04720	0.77	-2.8
4,969,956	-		EFB2_04720	0.77	-2.5
4,969,956	-		EFB2_04720	0.77	-1.0
4,969,956	-		EFB2_04720	0.77	+1.3
4,970,006	+		EFB2_04720	0.83	-0.3
4,970,006	+		EFB2_04720	0.83	+2.3
4,970,006	+		EFB2_04720	0.83	-0.7
4,970,006	+		EFB2_04720	0.83	-0.6
4,970,006	+		EFB2_04720	0.83	-0.9
4,970,007	-		EFB2_04720	0.83	-0.0
4,970,007	-		EFB2_04720	0.83	-0.2
4,970,007	-		EFB2_04720	0.83	-0.3
4,970,007	-		EFB2_04720	0.83	+0.2
4,970,044	+		EFB2_04720	0.88	-0.5
4,970,045	-		EFB2_04720	0.88	-1.5
4,970,045	-		EFB2_04720	0.88	+0.1
4,970,059	+		EFB2_04720	0.90	-1.0
4,970,059	+		EFB2_04720	0.90	+1.1
4,970,059	+		EFB2_04720	0.90	-0.0
4,970,059	+		EFB2_04720	0.90	+1.3
4,970,060	-		EFB2_04720	0.90	+0.5
4,970,060	-		EFB2_04720	0.90	-0.8
4,970,060	-		EFB2_04720	0.90	-2.0
4,970,060	-		EFB2_04720	0.90	+0.1
4,970,060	-		EFB2_04720	0.90	+0.3
4,970,078	-				+1.0
4,970,104	-				-1.5
4,970,150	+				-2.3
4,970,182	+				+0.3
4,970,182	+				-1.5
4,970,183	-				-3.0
4,970,187	+				-0.1
4,970,188	-				+2.0
4,970,188	-				-0.4
4,970,266	+				-0.4
4,970,266	+				+0.5
4,970,267	-				+1.3
4,970,301	+				-2.6
4,970,301	+				-1.3
4,970,301	+				+0.5
4,970,301	+				-1.1
4,970,301	+				-1.8
4,970,301	+				-1.4
4,970,302	-				-0.5
4,970,365	+				-0.6
4,970,366	-				-2.4
4,970,384	-				-0.4
4,970,427	+		EFB2_04721	0.15	-0.1
4,970,427	+		EFB2_04721	0.15	+1.5
4,970,427	+		EFB2_04721	0.15	-1.1
4,970,427	+		EFB2_04721	0.15	-1.6
4,970,428	-		EFB2_04721	0.15	-1.3
4,970,428	-		EFB2_04721	0.15	+0.5
4,970,428	-		EFB2_04721	0.15	-1.1
4,970,428	-		EFB2_04721	0.15	-3.1
4,970,428	-		EFB2_04721	0.15	-2.3
4,970,428	-		EFB2_04721	0.15	+0.1
4,970,428	-		EFB2_04721	0.15	-0.8
4,970,428	-		EFB2_04721	0.15	+1.3
4,970,450	+		EFB2_04721	0.19	-1.1
4,970,450	+		EFB2_04721	0.19	+2.4
4,970,451	-		EFB2_04721	0.19	-0.4
4,970,451	-		EFB2_04721	0.19	-0.2
4,970,451	-		EFB2_04721	0.19	-1.9
4,970,451	-		EFB2_04721	0.19	+0.7
4,970,451	-		EFB2_04721	0.19	+1.7
4,970,451	-		EFB2_04721	0.19	+0.2
4,970,452	+		EFB2_04721	0.19	+0.9
4,970,452	+		EFB2_04721	0.19	-3.0
4,970,452	+		EFB2_04721	0.19	+1.5
4,970,452	+		EFB2_04721	0.19	+0.5
4,970,452	+		EFB2_04721	0.19	-1.2
4,970,452	+		EFB2_04721	0.19	+0.6
4,970,452	+		EFB2_04721	0.19	+0.8
4,970,452	+		EFB2_04721	0.19	+0.6
4,970,453	-		EFB2_04721	0.19	-1.0
4,970,453	-		EFB2_04721	0.19	+0.8
4,970,453	-		EFB2_04721	0.19	+1.6
4,970,453	-		EFB2_04721	0.19	+0.9
4,970,479	+		EFB2_04721	0.24	-0.3
4,970,479	+		EFB2_04721	0.24	+1.2
4,970,482	+		EFB2_04721	0.24	+1.0
4,970,482	+		EFB2_04721	0.24	-0.3
4,970,482	+		EFB2_04721	0.24	-0.8
4,970,482	+		EFB2_04721	0.24	-2.2
4,970,482	+		EFB2_04721	0.24	-0.5
4,970,482	+		EFB2_04721	0.24	+0.5
4,970,482	+		EFB2_04721	0.24	+0.4
4,970,482	+		EFB2_04721	0.24	+0.3
4,970,483	-		EFB2_04721	0.24	-0.4
4,970,483	-		EFB2_04721	0.24	+0.6
4,970,483	-		EFB2_04721	0.24	-0.1
4,970,483	-		EFB2_04721	0.24	-0.3
4,970,483	-		EFB2_04721	0.24	-0.9
4,970,483	-		EFB2_04721	0.24	-1.2
4,970,483	-		EFB2_04721	0.24	+0.4
4,970,483	-		EFB2_04721	0.24	-0.1
4,970,483	-		EFB2_04721	0.24	-1.0
4,970,492	+		EFB2_04721	0.26	-0.5
4,970,492	+		EFB2_04721	0.26	-0.5
4,970,492	+		EFB2_04721	0.26	-0.8
4,970,492	+		EFB2_04721	0.26	-0.7
4,970,492	+		EFB2_04721	0.26	-1.3
4,970,492	+		EFB2_04721	0.26	+0.6
4,970,492	+		EFB2_04721	0.26	-0.2
4,970,492	+		EFB2_04721	0.26	-0.0
4,970,492	+		EFB2_04721	0.26	-0.3
4,970,492	+		EFB2_04721	0.26	+1.1
4,970,492	+		EFB2_04721	0.26	-0.3
4,970,492	+		EFB2_04721	0.26	-0.6
4,970,492	+		EFB2_04721	0.26	+0.6
4,970,492	+		EFB2_04721	0.26	-0.8
4,970,492	+		EFB2_04721	0.26	-0.9
4,970,492	+		EFB2_04721	0.26	+1.1
4,970,492	+		EFB2_04721	0.26	-1.0
4,970,492	+		EFB2_04721	0.26	-0.1
4,970,492	+		EFB2_04721	0.26	+0.4
4,970,493	-		EFB2_04721	0.26	+0.7
4,970,493	-		EFB2_04721	0.26	+0.1
4,970,493	-		EFB2_04721	0.26	+0.2
4,970,493	-		EFB2_04721	0.26	+1.1
4,970,493	-		EFB2_04721	0.26	-1.6
4,970,493	-		EFB2_04721	0.26	-0.6
4,970,493	-		EFB2_04721	0.26	-0.3
4,970,493	-		EFB2_04721	0.26	-1.1
4,970,493	-		EFB2_04721	0.26	-1.0
4,970,493	-		EFB2_04721	0.26	-1.4
4,970,493	-		EFB2_04721	0.26	+1.8
4,970,493	-		EFB2_04721	0.26	-0.2
4,970,493	-		EFB2_04721	0.26	-2.7
4,970,493	-		EFB2_04721	0.26	-1.5
4,970,493	-		EFB2_04721	0.26	-0.5
4,970,493	-		EFB2_04721	0.26	-0.4
4,970,493	-		EFB2_04721	0.26	+0.2
4,970,493	-		EFB2_04721	0.26	+0.4
4,970,493	-		EFB2_04721	0.26	-0.1
4,970,493	-		EFB2_04721	0.26	+0.4
4,970,493	-		EFB2_04721	0.26	-1.0
4,970,493	-		EFB2_04721	0.26	-0.9
4,970,493	-		EFB2_04721	0.26	-0.1
4,970,493	-		EFB2_04721	0.26	-0.2
4,970,493	-		EFB2_04721	0.26	+2.0
4,970,522	+		EFB2_04721	0.31	-2.8
4,970,522	+		EFB2_04721	0.31	-0.6
4,970,522	+		EFB2_04721	0.31	-0.4
4,970,522	+		EFB2_04721	0.31	-0.2
4,970,522	+		EFB2_04721	0.31	-0.6
4,970,522	+		EFB2_04721	0.31	+0.8
4,970,522	+		EFB2_04721	0.31	+0.5
4,970,522	+		EFB2_04721	0.31	+0.1
4,970,523	+		EFB2_04721	0.31	-0.0
4,970,523	-		EFB2_04721	0.31	+0.3
4,970,523	-		EFB2_04721	0.31	-2.0
4,970,523	-		EFB2_04721	0.31	-1.0
4,970,523	-		EFB2_04721	0.31	+0.7
4,970,523	-		EFB2_04721	0.31	+0.5
4,970,523	-		EFB2_04721	0.31	-0.6
4,970,523	-		EFB2_04721	0.31	-0.1
4,970,523	-		EFB2_04721	0.31	+0.4
4,970,560	+		EFB2_04721	0.38	+0.3
4,970,560	+		EFB2_04721	0.38	+0.1
4,970,560	+		EFB2_04721	0.38	-0.6
4,970,560	+		EFB2_04721	0.38	+1.0
4,970,560	+		EFB2_04721	0.38	-0.5
4,970,560	+		EFB2_04721	0.38	+0.5
4,970,560	+		EFB2_04721	0.38	+0.3
4,970,560	+		EFB2_04721	0.38	+0.6
4,970,560	+		EFB2_04721	0.38	+0.7
4,970,560	+		EFB2_04721	0.38	+0.4
4,970,560	+		EFB2_04721	0.38	-2.1
4,970,560	+		EFB2_04721	0.38	+0.8
4,970,560	+		EFB2_04721	0.38	-3.1
4,970,560	+		EFB2_04721	0.38	-3.1
4,970,560	+		EFB2_04721	0.38	-1.5
4,970,560	+		EFB2_04721	0.38	-0.1
4,970,561	-		EFB2_04721	0.38	+0.2
4,970,561	-		EFB2_04721	0.38	+1.9
4,970,561	-		EFB2_04721	0.38	-2.5
4,970,561	-		EFB2_04721	0.38	-0.4
4,970,561	-		EFB2_04721	0.38	+0.8
4,970,561	-		EFB2_04721	0.38	+0.4
4,970,561	-		EFB2_04721	0.38	+0.5
4,970,561	-		EFB2_04721	0.38	-1.1
4,970,561	-		EFB2_04721	0.38	+0.6
4,970,561	-		EFB2_04721	0.38	-1.5
4,970,561	-		EFB2_04721	0.38	-0.6
4,970,561	-		EFB2_04721	0.38	+2.3
4,970,561	-		EFB2_04721	0.38	-0.1
4,970,561	-		EFB2_04721	0.38	-0.7
4,970,561	-		EFB2_04721	0.38	+0.4
4,970,561	-		EFB2_04721	0.38	-0.1
4,970,561	-		EFB2_04721	0.38	-0.1
4,970,561	-		EFB2_04721	0.38	+0.2
4,970,561	-		EFB2_04721	0.38	-0.9
4,970,561	-		EFB2_04721	0.38	+0.9
4,970,561	-		EFB2_04721	0.38	-0.6
4,970,561	-		EFB2_04721	0.38	-0.0
4,970,675	+		EFB2_04721	0.57	+0.3
4,970,695	+		EFB2_04721	0.61	-0.9
4,970,695	+		EFB2_04721	0.61	+0.2
4,970,696	-		EFB2_04721	0.61	-0.8
4,970,696	-		EFB2_04721	0.61	+1.2
4,970,696	-		EFB2_04721	0.61	-1.2
4,970,696	-		EFB2_04721	0.61	+0.9
4,970,696	-		EFB2_04721	0.61	+0.1
4,970,771	+		EFB2_04721	0.73	+1.4
4,970,771	+		EFB2_04721	0.73	+0.9
4,970,771	+		EFB2_04721	0.73	-2.1
4,970,771	+		EFB2_04721	0.73	-1.5
4,970,771	+		EFB2_04721	0.73	+0.5
4,970,771	+		EFB2_04721	0.73	+0.0
4,970,771	+		EFB2_04721	0.73	-0.2
4,970,771	+		EFB2_04721	0.73	+1.2
4,970,771	+		EFB2_04721	0.73	-0.8
4,970,771	+		EFB2_04721	0.73	+0.8
4,970,771	+		EFB2_04721	0.73	-0.1
4,970,771	+		EFB2_04721	0.73	-0.4
4,970,771	+		EFB2_04721	0.73	+0.1
4,970,771	+		EFB2_04721	0.73	-0.5
4,970,771	+		EFB2_04721	0.73	-1.2
4,970,771	+		EFB2_04721	0.73	+2.1
4,970,772	-		EFB2_04721	0.74	-2.0
4,970,772	-		EFB2_04721	0.74	+0.5
4,970,772	-		EFB2_04721	0.74	-0.2
4,970,772	-		EFB2_04721	0.74	-2.1
4,970,772	-		EFB2_04721	0.74	-1.5
4,970,772	-		EFB2_04721	0.74	+0.4
4,970,772	-		EFB2_04721	0.74	+0.2
4,970,772	-		EFB2_04721	0.74	-0.3
4,970,772	-		EFB2_04721	0.74	+0.5
4,970,861	+		EFB2_04721	0.89	-0.1
4,970,862	-		EFB2_04721	0.89	+1.5
4,970,862	-		EFB2_04721	0.89	-3.4
4,970,865	+		EFB2_04721	0.89	+0.3
4,970,893	+				+0.3
4,970,894	-				-0.1
4,970,941	-				+1.2
4,971,124	+				+1.2
4,971,124	+				+1.0
4,971,124	+				+0.0
4,971,125	-				+1.0
4,971,125	-				+1.0
4,971,125	-				-1.4
4,971,125	-				-0.7
4,971,125	-				+1.0
4,971,130	+				-0.0
4,971,130	+				+0.2
4,971,130	+				+1.9
4,971,130	+				+1.0
4,971,130	+				-0.2
4,971,130	+				-3.1
4,971,130	+				-2.3
4,971,130	+				+1.0
4,971,131	-				-0.1
4,971,131	-				+0.7
4,971,131	-				+0.2
4,971,131	-				-0.2
4,971,131	-				-0.3
4,971,131	-				+0.2
4,971,131	-				+1.2
4,971,131	-				-0.3
4,971,131	-				-0.3
4,971,131	-				+2.4
4,971,131	-				-0.9