Strain Fitness in Escherichia fergusonii Becca around EFB2_02927

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
3,062,351	-		EFB2_02926	0.16	-2.1
3,062,360	+		EFB2_02926	0.17	-0.4
3,062,361	-		EFB2_02926	0.17	+1.2
3,062,362	+		EFB2_02926	0.17	-1.8
3,062,379	+		EFB2_02926	0.18	-0.3
3,062,379	+		EFB2_02926	0.18	-3.0
3,062,380	-		EFB2_02926	0.18	+2.1
3,062,397	+		EFB2_02926	0.20	+0.4
3,062,397	+		EFB2_02926	0.20	+0.7
3,062,422	+		EFB2_02926	0.22	-0.8
3,062,422	+		EFB2_02926	0.22	-0.8
3,062,423	-		EFB2_02926	0.22	+0.8
3,062,437	+		EFB2_02926	0.23	+1.4
3,062,437	+		EFB2_02926	0.23	+0.9
3,062,438	-		EFB2_02926	0.23	-1.8
3,062,441	+		EFB2_02926	0.24	-2.0
3,062,452	+		EFB2_02926	0.25	+0.9
3,062,452	+		EFB2_02926	0.25	+1.8
3,062,452	+		EFB2_02926	0.25	-2.5
3,062,453	-		EFB2_02926	0.25	-0.9
3,062,486	+		EFB2_02926	0.28	-1.1
3,062,486	+		EFB2_02926	0.28	+1.1
3,062,487	-		EFB2_02926	0.28	+0.6
3,062,487	-		EFB2_02926	0.28	-0.2
3,062,490	-		EFB2_02926	0.28	+0.8
3,062,490	-		EFB2_02926	0.28	-3.0
3,062,490	-		EFB2_02926	0.28	-0.2
3,062,499	+		EFB2_02926	0.29	-0.5
3,062,499	+		EFB2_02926	0.29	+1.7
3,062,499	+		EFB2_02926	0.29	-0.5
3,062,499	+		EFB2_02926	0.29	+1.1
3,062,499	+		EFB2_02926	0.29	+0.4
3,062,500	-		EFB2_02926	0.29	+0.7
3,062,500	-		EFB2_02926	0.29	+0.2
3,062,500	-		EFB2_02926	0.29	-0.5
3,062,541	+		EFB2_02926	0.32	-0.4
3,062,541	+		EFB2_02926	0.32	-1.0
3,062,542	-		EFB2_02926	0.32	+0.9
3,062,542	-		EFB2_02926	0.32	+0.1
3,062,542	-		EFB2_02926	0.32	+1.2
3,062,542	-		EFB2_02926	0.32	+1.7
3,062,550	+		EFB2_02926	0.33	+0.3
3,062,550	+		EFB2_02926	0.33	+2.0
3,062,550	+		EFB2_02926	0.33	-0.0
3,062,550	+		EFB2_02926	0.33	+1.1
3,062,550	+		EFB2_02926	0.33	-0.6
3,062,550	+		EFB2_02926	0.33	-1.6
3,062,550	+		EFB2_02926	0.33	+1.1
3,062,551	-		EFB2_02926	0.33	+0.4
3,062,551	-		EFB2_02926	0.33	-1.6
3,062,551	-		EFB2_02926	0.33	+1.1
3,062,551	-		EFB2_02926	0.33	-0.1
3,062,551	-		EFB2_02926	0.33	-0.9
3,062,551	-		EFB2_02926	0.33	+1.2
3,062,551	-		EFB2_02926	0.33	+2.1
3,062,551	-		EFB2_02926	0.33	+0.7
3,062,551	-		EFB2_02926	0.33	+1.1
3,062,552	+		EFB2_02926	0.33	-1.9
3,062,553	-		EFB2_02926	0.33	+0.3
3,062,553	-		EFB2_02926	0.33	+1.0
3,062,555	+		EFB2_02926	0.34	+0.7
3,062,555	+		EFB2_02926	0.34	-2.8
3,062,555	+		EFB2_02926	0.34	+3.4
3,062,555	+		EFB2_02926	0.34	-0.2
3,062,555	+		EFB2_02926	0.34	+0.6
3,062,555	+		EFB2_02926	0.34	+0.8
3,062,555	+		EFB2_02926	0.34	-1.7
3,062,555	+		EFB2_02926	0.34	+1.0
3,062,555	+		EFB2_02926	0.34	+0.2
3,062,555	+		EFB2_02926	0.34	+0.6
3,062,556	-		EFB2_02926	0.34	-0.9
3,062,556	-		EFB2_02926	0.34	-1.3
3,062,556	-		EFB2_02926	0.34	-1.3
3,062,556	-		EFB2_02926	0.34	-1.1
3,062,556	-		EFB2_02926	0.34	+0.0
3,062,556	-		EFB2_02926	0.34	+2.8
3,062,556	-		EFB2_02926	0.34	+0.3
3,062,556	-		EFB2_02926	0.34	-0.6
3,062,556	-		EFB2_02926	0.34	+0.2
3,062,572	+		EFB2_02926	0.35	-1.0
3,062,573	-		EFB2_02926	0.35	+1.5
3,062,573	-		EFB2_02926	0.35	-1.2
3,062,573	-		EFB2_02926	0.35	+0.1
3,062,652	-		EFB2_02926	0.42	-1.3
3,062,695	+		EFB2_02926	0.46	-0.8
3,062,702	-		EFB2_02926	0.46	+0.9
3,062,743	+		EFB2_02926	0.50	-0.2
3,062,743	+		EFB2_02926	0.50	-0.9
3,062,743	+		EFB2_02926	0.50	-3.0
3,062,743	+		EFB2_02926	0.50	-1.0
3,062,743	+		EFB2_02926	0.50	+1.6
3,062,744	-		EFB2_02926	0.50	+1.1
3,062,744	-		EFB2_02926	0.50	+1.0
3,062,767	-		EFB2_02926	0.52	+0.3
3,062,801	+		EFB2_02926	0.55	-0.4
3,062,802	-		EFB2_02926	0.55	+1.1
3,062,818	+		EFB2_02926	0.56	-0.4
3,062,818	+		EFB2_02926	0.56	-0.8
3,062,823	+		EFB2_02926	0.57	-1.0
3,062,823	+		EFB2_02926	0.57	+1.1
3,062,823	+		EFB2_02926	0.57	+2.3
3,062,838	-		EFB2_02926	0.58	-0.8
3,062,885	+		EFB2_02926	0.62	-1.9
3,062,906	+		EFB2_02926	0.64	-1.7
3,062,907	-		EFB2_02926	0.64	-0.7
3,062,907	-		EFB2_02926	0.64	+0.1
3,062,907	-		EFB2_02926	0.64	+0.6
3,062,907	-		EFB2_02926	0.64	-1.2
3,062,937	+		EFB2_02926	0.67	-1.2
3,062,937	+		EFB2_02926	0.67	-0.7
3,062,937	+		EFB2_02926	0.67	+0.1
3,062,937	+		EFB2_02926	0.67	-2.5
3,062,937	+		EFB2_02926	0.67	+2.0
3,062,937	+		EFB2_02926	0.67	+0.6
3,062,937	+		EFB2_02926	0.67	+0.8
3,062,938	-		EFB2_02926	0.67	+1.5
3,062,938	-		EFB2_02926	0.67	+0.7
3,062,938	-		EFB2_02926	0.67	+0.6
3,062,938	-		EFB2_02926	0.67	-0.2
3,062,938	-		EFB2_02926	0.67	-0.9
3,062,941	+		EFB2_02926	0.67	-0.4
3,062,941	+		EFB2_02926	0.67	+2.0
3,062,941	+		EFB2_02926	0.67	+0.3
3,062,941	+		EFB2_02926	0.67	+0.3
3,062,941	+		EFB2_02926	0.67	-0.4
3,062,941	+		EFB2_02926	0.67	-1.7
3,062,941	+		EFB2_02926	0.67	-1.7
3,062,942	-		EFB2_02926	0.67	-0.4
3,062,942	-		EFB2_02926	0.67	+0.6
3,062,956	-		EFB2_02926	0.68	+0.3
3,062,979	+		EFB2_02926	0.70	+0.3
3,062,979	+		EFB2_02926	0.70	-2.1
3,062,979	+		EFB2_02926	0.70	-2.9
3,062,979	+		EFB2_02926	0.70	-1.4
3,062,980	-		EFB2_02926	0.70	-0.1
3,063,059	+		EFB2_02926	0.77	-1.0
3,063,060	-		EFB2_02926	0.77	-0.2
3,063,084	+		EFB2_02926	0.79	-1.8
3,063,084	+		EFB2_02926	0.79	-0.3
3,063,084	+		EFB2_02926	0.79	+0.0
3,063,084	+		EFB2_02926	0.79	-0.7
3,063,084	+		EFB2_02926	0.79	+1.4
3,063,084	+		EFB2_02926	0.79	-0.2
3,063,084	+		EFB2_02926	0.79	+0.1
3,063,084	+		EFB2_02926	0.79	-0.2
3,063,084	+		EFB2_02926	0.79	+1.5
3,063,084	+		EFB2_02926	0.79	-1.9
3,063,084	+		EFB2_02926	0.79	+0.4
3,063,084	+		EFB2_02926	0.79	+0.5
3,063,084	+		EFB2_02926	0.79	+0.5
3,063,084	+		EFB2_02926	0.79	+1.1
3,063,084	+		EFB2_02926	0.79	-1.9
3,063,084	+		EFB2_02926	0.79	-0.4
3,063,085	-		EFB2_02926	0.79	+0.5
3,063,085	-		EFB2_02926	0.79	+1.0
3,063,085	-		EFB2_02926	0.79	-0.1
3,063,085	-		EFB2_02926	0.79	+0.1
3,063,085	-		EFB2_02926	0.79	-0.1
3,063,085	-		EFB2_02926	0.79	-0.1
3,063,093	-		EFB2_02926	0.80	-1.3
3,063,107	+		EFB2_02926	0.81	-0.9
3,063,107	+		EFB2_02926	0.81	+1.2
3,063,107	+		EFB2_02926	0.81	+0.8
3,063,107	+		EFB2_02926	0.81	+2.1
3,063,107	+		EFB2_02926	0.81	+0.4
3,063,107	+		EFB2_02926	0.81	+0.6
3,063,108	-		EFB2_02926	0.81	+0.3
3,063,108	-		EFB2_02926	0.81	-2.6
3,063,108	-		EFB2_02926	0.81	+2.0
3,063,108	-		EFB2_02926	0.81	-1.3
3,063,111	+		EFB2_02926	0.82	-2.3
3,063,111	+		EFB2_02926	0.82	+1.1
3,063,111	+		EFB2_02926	0.82	-0.2
3,063,112	-		EFB2_02926	0.82	+1.6
3,063,112	-		EFB2_02926	0.82	-0.1
3,063,112	-		EFB2_02926	0.82	-1.6
3,063,112	-		EFB2_02926	0.82	-1.8
3,063,150	+		EFB2_02926	0.85	-1.8
3,063,150	+		EFB2_02926	0.85	-0.4
3,063,150	+		EFB2_02926	0.85	-0.8
3,063,150	+		EFB2_02926	0.85	+0.1
3,063,151	-		EFB2_02926	0.85	+1.6
3,063,151	-		EFB2_02926	0.85	+0.5
3,063,151	-		EFB2_02926	0.85	-1.8
3,063,151	-		EFB2_02926	0.85	+0.3
3,063,155	+		EFB2_02926	0.85	+1.8
3,063,155	+		EFB2_02926	0.85	-0.9
3,063,155	+		EFB2_02926	0.85	-1.6
3,063,155	+		EFB2_02926	0.85	+1.1
3,063,155	+		EFB2_02926	0.85	-1.6
3,063,155	+		EFB2_02926	0.85	-0.2
3,063,155	+		EFB2_02926	0.85	+3.4
3,063,155	+		EFB2_02926	0.85	-0.6
3,063,156	-		EFB2_02926	0.85	-2.3
3,063,156	-		EFB2_02926	0.85	-2.6
3,063,156	-		EFB2_02926	0.85	-0.3
3,063,156	-		EFB2_02926	0.85	-1.0
3,063,156	-		EFB2_02926	0.85	+1.1
3,063,208	+				-0.5
3,063,208	+				+1.0
3,063,208	+				-0.0
3,063,209	-				+0.1
3,063,209	-				+2.3
3,063,209	-				+0.6
3,063,209	-				+2.1
3,063,212	-				+0.9
3,063,244	+				-1.1
3,063,244	+				+0.4
3,063,244	+				-1.7
3,063,244	+				+1.9
3,063,245	-				-0.3
3,063,245	-				-1.2
3,063,245	-				+2.1
3,063,245	-				+0.3
3,063,278	+				+0.1
3,063,279	-				-1.1
3,063,290	+				+1.0
3,063,290	+				-0.0
3,063,291	-				+0.3
3,063,322	-				-1.0
3,063,332	+				+2.7
3,063,332	+				-0.2
3,063,332	+				+0.4
3,063,333	-				-0.2
3,063,333	-				+1.0
3,063,333	-				-1.2
3,063,337	+				+0.0
3,063,338	-				+1.5
3,063,494	+		EFB2_02927	0.11	-0.6
3,063,494	+		EFB2_02927	0.11	-0.1
3,063,494	+		EFB2_02927	0.11	+0.7
3,063,494	+		EFB2_02927	0.11	+1.1
3,063,494	+		EFB2_02927	0.11	-0.7
3,063,495	-		EFB2_02927	0.11	+1.7
3,063,495	-		EFB2_02927	0.11	+1.9
3,063,495	-		EFB2_02927	0.11	+2.6
3,063,495	-		EFB2_02927	0.11	-0.1
3,063,495	-		EFB2_02927	0.11	-0.8
3,063,495	-		EFB2_02927	0.11	-2.3
3,063,495	-		EFB2_02927	0.11	+0.9
3,063,495	-		EFB2_02927	0.11	+1.1
3,063,495	-		EFB2_02927	0.11	+2.4
3,063,507	+		EFB2_02927	0.12	+0.6
3,063,516	+		EFB2_02927	0.12	-3.0
3,063,517	-		EFB2_02927	0.13	-0.2
3,063,523	+		EFB2_02927	0.13	+0.7
3,063,523	+		EFB2_02927	0.13	-1.9
3,063,523	+		EFB2_02927	0.13	+0.3
3,063,523	+		EFB2_02927	0.13	-1.9
3,063,524	-		EFB2_02927	0.13	-0.9
3,063,524	-		EFB2_02927	0.13	+0.7
3,063,524	-		EFB2_02927	0.13	+0.5
3,063,524	-		EFB2_02927	0.13	+0.4
3,063,524	-		EFB2_02927	0.13	+0.4
3,063,547	+		EFB2_02927	0.15	-0.6
3,063,547	+		EFB2_02927	0.15	-0.2
3,063,547	+		EFB2_02927	0.15	-0.2
3,063,567	+		EFB2_02927	0.16	+1.0
3,063,610	-		EFB2_02927	0.19	-1.4
3,063,621	+		EFB2_02927	0.20	-0.1
3,063,621	+		EFB2_02927	0.20	+0.0
3,063,621	+		EFB2_02927	0.20	-0.4
3,063,622	-		EFB2_02927	0.20	-0.7
3,063,622	-		EFB2_02927	0.20	+2.1
3,063,622	-		EFB2_02927	0.20	+0.6
3,063,633	+		EFB2_02927	0.20	+1.0
3,063,642	+		EFB2_02927	0.21	-2.6
3,063,642	+		EFB2_02927	0.21	+0.4
3,063,642	+		EFB2_02927	0.21	+0.4
3,063,642	+		EFB2_02927	0.21	-0.9
3,063,642	+		EFB2_02927	0.21	+1.3
3,063,642	+		EFB2_02927	0.21	-0.7
3,063,643	-		EFB2_02927	0.21	-1.4
3,063,643	-		EFB2_02927	0.21	+0.5
3,063,643	-		EFB2_02927	0.21	+1.6
3,063,643	-		EFB2_02927	0.21	-1.2
3,063,643	-		EFB2_02927	0.21	-0.4
3,063,643	-		EFB2_02927	0.21	-1.7
3,063,643	-		EFB2_02927	0.21	-1.0
3,063,666	+		EFB2_02927	0.23	+0.2
3,063,667	-		EFB2_02927	0.23	-0.9
3,063,688	+		EFB2_02927	0.24	-0.2
3,063,689	-		EFB2_02927	0.24	+0.2
3,063,693	+		EFB2_02927	0.24	+0.8
3,063,693	+		EFB2_02927	0.24	+0.4
3,063,693	+		EFB2_02927	0.24	-1.9
3,063,693	+		EFB2_02927	0.24	-0.7
3,063,694	-		EFB2_02927	0.24	+1.4
3,063,694	-		EFB2_02927	0.24	+0.0
3,063,694	-		EFB2_02927	0.24	-1.3
3,063,694	-		EFB2_02927	0.24	-0.5
3,063,696	+		EFB2_02927	0.25	+0.1
3,063,696	+		EFB2_02927	0.25	-2.4
3,063,696	+		EFB2_02927	0.25	-1.9
3,063,696	+		EFB2_02927	0.25	+0.6
3,063,696	+		EFB2_02927	0.25	+1.6
3,063,696	+		EFB2_02927	0.25	-1.3
3,063,696	+		EFB2_02927	0.25	-0.2
3,063,696	+		EFB2_02927	0.25	+0.0
3,063,696	+		EFB2_02927	0.25	-0.1
3,063,696	+		EFB2_02927	0.25	-0.7
3,063,696	+		EFB2_02927	0.25	+0.1
3,063,696	+		EFB2_02927	0.25	-2.7
3,063,696	+		EFB2_02927	0.25	+0.9
3,063,696	+		EFB2_02927	0.25	+0.6
3,063,696	+		EFB2_02927	0.25	-1.6
3,063,697	-		EFB2_02927	0.25	+0.7
3,063,697	-		EFB2_02927	0.25	-0.2
3,063,697	-		EFB2_02927	0.25	-1.0
3,063,697	-		EFB2_02927	0.25	-0.1
3,063,697	-		EFB2_02927	0.25	+1.0
3,063,697	-		EFB2_02927	0.25	-2.7
3,063,697	-		EFB2_02927	0.25	+2.1
3,063,697	-		EFB2_02927	0.25	-0.3
3,063,697	-		EFB2_02927	0.25	+1.0
3,063,697	-		EFB2_02927	0.25	-1.8
3,063,697	-		EFB2_02927	0.25	+0.1
3,063,697	-		EFB2_02927	0.25	+1.4
3,063,697	-		EFB2_02927	0.25	+0.1
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