Strain Fitness in Escherichia fergusonii Becca around EFB2_00487

Experiment: BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae
510,246	-		EFB2_00485	0.79	-1.6
510,246	-		EFB2_00485	0.79	+0.6
510,272	+		EFB2_00485	0.80	+1.0
510,272	+		EFB2_00485	0.80	-0.1
510,272	+		EFB2_00485	0.80	+0.2
510,272	+		EFB2_00485	0.80	+0.9
510,273	-		EFB2_00485	0.80	-1.3
510,273	-		EFB2_00485	0.80	-0.2
510,296	+		EFB2_00485	0.81	-0.5
510,296	+		EFB2_00485	0.81	+0.5
510,296	+		EFB2_00485	0.81	-0.2
510,296	+		EFB2_00485	0.81	+0.0
510,296	+		EFB2_00485	0.81	+0.9
510,296	+		EFB2_00485	0.81	-1.6
510,296	+		EFB2_00485	0.81	-0.8
510,296	+		EFB2_00485	0.81	-0.5
510,297	-		EFB2_00485	0.81	-0.7
510,297	-		EFB2_00485	0.81	-1.8
510,297	-		EFB2_00485	0.81	-0.6
510,297	-		EFB2_00485	0.81	-2.2
510,297	-		EFB2_00485	0.81	+0.0
510,297	-		EFB2_00485	0.81	-1.2
510,297	-		EFB2_00485	0.81	-0.4
510,302	+		EFB2_00485	0.82	-1.7
510,302	+		EFB2_00485	0.82	-2.5
510,302	+		EFB2_00485	0.82	+0.1
510,302	+		EFB2_00485	0.82	-0.2
510,302	+		EFB2_00485	0.82	-0.6
510,302	+		EFB2_00485	0.82	+0.4
510,302	+		EFB2_00485	0.82	-1.2
510,302	+		EFB2_00485	0.82	-0.7
510,303	-		EFB2_00485	0.82	+0.6
510,303	-		EFB2_00485	0.82	-0.4
510,303	-		EFB2_00485	0.82	+0.4
510,303	-		EFB2_00485	0.82	+0.7
510,303	-		EFB2_00485	0.82	-0.5
510,303	-		EFB2_00485	0.82	-0.1
510,303	-		EFB2_00485	0.82	+1.1
510,303	-		EFB2_00485	0.82	+0.2
510,303	-		EFB2_00485	0.82	+1.3
510,309	+		EFB2_00485	0.82	-0.1
510,309	+		EFB2_00485	0.82	+0.6
510,309	+		EFB2_00485	0.82	+0.5
510,309	+		EFB2_00485	0.82	-0.8
510,310	-		EFB2_00485	0.82	-1.1
510,310	-		EFB2_00485	0.82	+1.2
510,310	-		EFB2_00485	0.82	+1.1
510,310	-		EFB2_00485	0.82	-2.1
510,310	-		EFB2_00485	0.82	+0.5
510,310	-		EFB2_00485	0.82	+0.1
510,311	+		EFB2_00485	0.82	-0.6
510,311	+		EFB2_00485	0.82	-1.1
510,311	+		EFB2_00485	0.82	+1.0
510,311	+		EFB2_00485	0.82	+0.9
510,311	+		EFB2_00485	0.82	+0.1
510,311	+		EFB2_00485	0.82	+0.9
510,311	+		EFB2_00485	0.82	-1.4
510,311	+		EFB2_00485	0.82	-0.0
510,311	+		EFB2_00485	0.82	+0.9
510,311	+		EFB2_00485	0.82	-2.5
510,311	+		EFB2_00485	0.82	-2.4
510,311	+		EFB2_00485	0.82	+1.4
510,311	+		EFB2_00485	0.82	+0.9
510,311	+		EFB2_00485	0.82	+0.5
510,311	+		EFB2_00485	0.82	-0.2
510,311	+		EFB2_00485	0.82	-0.6
510,311	+		EFB2_00485	0.82	-0.6
510,311	+		EFB2_00485	0.82	+0.8
510,311	+		EFB2_00485	0.82	+1.2
510,312	-		EFB2_00485	0.82	+1.3
510,312	-		EFB2_00485	0.82	-0.6
510,312	-		EFB2_00485	0.82	+1.0
510,312	-		EFB2_00485	0.82	-2.8
510,312	-		EFB2_00485	0.82	+0.2
510,312	-		EFB2_00485	0.82	-0.2
510,312	-		EFB2_00485	0.82	-0.2
510,312	-		EFB2_00485	0.82	-2.4
510,312	-		EFB2_00485	0.82	-1.8
510,312	-		EFB2_00485	0.82	-1.0
510,312	-		EFB2_00485	0.82	+0.2
510,312	-		EFB2_00485	0.82	+0.0
510,312	-		EFB2_00485	0.82	+0.1
510,312	-		EFB2_00485	0.82	-2.6
510,312	-		EFB2_00485	0.82	-0.1
510,312	-		EFB2_00485	0.82	+0.9
510,312	-		EFB2_00485	0.82	+1.0
510,312	-		EFB2_00485	0.82	+0.9
510,312	-		EFB2_00485	0.82	-1.3
510,312	-		EFB2_00485	0.82	+0.4
510,312	-		EFB2_00485	0.82	-0.3
510,312	-		EFB2_00485	0.82	-0.0
510,420	+		EFB2_00485	0.86	-1.7
510,420	+		EFB2_00485	0.86	+0.1
510,420	+		EFB2_00485	0.86	+0.2
510,421	-		EFB2_00485	0.86	+0.1
510,421	-		EFB2_00485	0.86	+0.9
510,431	+		EFB2_00485	0.86	+0.7
510,431	+		EFB2_00485	0.86	-2.4
510,431	+		EFB2_00485	0.86	+0.7
510,431	+		EFB2_00485	0.86	+0.5
510,431	+		EFB2_00485	0.86	+0.3
510,432	-		EFB2_00485	0.86	+0.5
510,432	-		EFB2_00485	0.86	-1.2
510,432	-		EFB2_00485	0.86	+0.7
510,432	-		EFB2_00485	0.86	+0.8
510,432	-		EFB2_00485	0.86	+1.7
510,473	+		EFB2_00485	0.88	-0.9
510,473	+		EFB2_00485	0.88	-0.3
510,473	+		EFB2_00485	0.88	-1.1
510,473	+		EFB2_00485	0.88	-2.1
510,474	-		EFB2_00485	0.88	-0.5
510,474	-		EFB2_00485	0.88	-0.8
510,474	-		EFB2_00485	0.88	-0.1
510,474	-		EFB2_00485	0.88	-2.5
510,474	-		EFB2_00485	0.88	-0.4
510,533	+				-1.0
510,534	-				+0.2
510,534	-				+0.6
510,534	-				+0.3
510,534	-				+1.5
510,534	-				-1.0
510,612	+				-0.2
510,612	+				-0.2
510,612	+				+0.2
510,612	+				-0.7
510,612	+				-1.3
510,612	+				-1.1
510,612	+				-0.1
510,612	+				+0.5
510,612	+				+0.5
510,612	+				+1.0
510,612	+				-0.1
510,612	+				+1.7
510,612	+				-1.2
510,612	+				-3.6
510,613	-				+0.1
510,613	-				+0.1
510,613	-				+0.5
510,613	-				+2.0
510,613	-				-0.3
510,613	-				-1.1
510,613	-				+1.0
510,613	-				-0.1
510,613	-				-0.7
510,613	-				+0.8
510,613	-				+0.3
510,613	-				-0.2
510,613	-				-0.7
510,613	-				+0.3
510,613	-				+0.3
510,613	-				-0.2
510,656	+				-1.9
510,656	+				-0.0
510,656	+				-0.9
510,657	-				+0.5
510,657	-				-0.3
510,665	+				-2.1
510,665	+				+1.8
510,666	-				-0.5
510,674	+				+0.4
510,674	+				-1.8
510,675	-				-2.0
510,711	-				+0.2
510,740	+				-0.9
510,741	-				+0.6
510,759	+				+0.3
510,759	+				+0.6
510,760	-				-0.9
510,760	-				-0.2
510,760	-				-0.3
510,767	+				-0.2
510,768	-				-0.1
510,788	+				-0.2
510,788	+				+0.7
510,789	-				+1.1
510,789	-				+0.0
510,791	+				+1.1
510,791	+				-1.4
510,791	+				+0.0
510,791	+				-0.6
510,792	-				+1.2
510,792	-				+0.8
510,792	-				+0.9
510,792	-				-0.5
510,792	-				-1.2
510,798	+				-0.4
510,798	+				-1.0
510,798	+				+0.4
510,798	+				-0.3
510,798	+				+0.7
510,798	+				+1.7
510,799	-				+0.5
510,799	-				+0.2
510,799	-				+0.9
510,799	-				-0.8
510,799	-				-0.5
510,799	-				-3.0
510,799	-				-2.7
510,799	-				-0.8
510,813	+				-1.3
510,849	+				-1.3
510,867	-				-0.4
510,867	-				+1.4
510,867	-				-0.3
510,878	+				+0.3
510,878	+				+0.5
510,878	+				-1.6
510,878	+				+0.3
510,878	+				+1.5
510,878	+				+0.8
510,879	-				+0.7
510,879	-				+1.2
510,879	-				-3.8
510,879	-				+1.9
510,879	-				+0.7
510,879	-				-0.9
510,879	-				-0.3
510,879	-				+1.2
510,885	-				-0.7
510,895	+				-0.1
510,895	+				-0.4
510,913	+				+0.1
510,922	+				+2.6
510,922	+				+0.1
510,923	-				-1.8
510,954	+				+0.4
510,954	+				-0.0
510,955	-				-0.6
510,955	-				-0.1
510,955	-				-2.7
510,955	-				+0.7
510,955	-				-0.9
510,955	-				-0.9
510,955	-				-0.3
510,956	+				+0.6
510,956	+				+0.3
510,968	+				+0.9
510,968	+				+3.5
510,968	+				+0.5
510,968	+				-0.3
510,968	+				-0.2
510,968	+				+1.3
510,969	-				+0.6
510,969	-				-1.7
510,969	-				-2.3
510,969	-				+0.5
510,969	-				-0.2
510,969	-				-0.1
510,969	-				-0.2
510,969	-				-0.8
510,969	-				+0.9
510,969	-				-0.7
510,969	-				-3.5
510,972	+				+1.1
510,972	+				-0.6
510,972	+				-0.3
510,972	+				+1.5
510,972	+				+1.3
510,972	+				-0.3
510,972	+				+0.8
510,972	+				-2.5
510,972	+				-0.1
510,972	+				+0.4
510,972	+				+1.0
510,972	+				+0.3
510,972	+				+0.7
510,972	+				-0.6
510,972	+				+0.1
510,972	+				-2.6
510,972	+				+0.6
510,972	+				-0.1
510,972	+				+0.2
510,972	+				+0.4
510,972	+				+1.0
510,972	+				-0.3
510,972	+				-0.3
510,972	+				+0.7
510,972	+				+0.1
510,972	+				-0.9
510,972	+				-1.9
510,972	+				-1.9
510,972	+				-0.6
510,972	+				-0.3
510,972	+				+1.4
510,972	+				+0.5
510,972	+				-0.2
510,972	+				+0.8
510,972	+				+0.1
510,972	+				-0.4
510,972	+				+0.7
510,972	+				+0.1
510,972	+				+0.5
510,972	+				-0.8
510,972	+				+0.2
510,972	+				+1.9
510,972	+				-0.3
510,972	+				-0.1
510,972	+				+0.8
510,972	+				-0.8
510,972	+				+0.5
510,972	+				+0.9
510,972	+				+0.0
510,972	+				+0.8
510,973	-				-1.0
510,973	-				-0.7
510,973	-				-0.8
510,973	-				+0.5
510,973	-				+1.0
510,973	-				-0.4
510,973	-				-1.2
510,973	-				-0.5
510,973	-				+1.6
510,973	-				-1.6
510,973	-				+0.7
510,973	-				-0.1
510,973	-				-0.1
510,973	-				-0.2
510,973	-				+0.0
510,973	-				-0.9
510,973	-				+0.6
510,973	-				-0.1
510,973	-				-0.4
510,973	-				+1.0
510,973	-				-0.5
510,973	-				+1.1
510,973	-				+1.1
510,973	-				-0.3
510,973	-				-2.6
510,973	-				-1.2
510,986	+				+1.2
510,986	+				-0.9
510,986	+				-1.3
510,986	+				+0.5
510,986	+				-1.9
510,986	+				-1.4
510,986	+				-0.3
510,986	+				+0.9
510,986	+				+0.0
510,986	+				-0.7
510,986	+				+0.3
510,986	+				+0.6
510,986	+				-1.5
510,987	-				-0.3
510,987	-				-0.7
510,987	-				-1.1
510,987	-				-1.1
510,987	-				+1.1
510,987	-				-0.5
510,987	-				+0.6
510,987	-				-0.2
510,987	-				-0.1
510,987	-				-1.0
510,987	-				+2.9
510,992	+		EFB2_00486	0.12	+0.6
510,992	+		EFB2_00486	0.12	-0.4
510,992	+		EFB2_00486	0.12	+1.2
510,993	-		EFB2_00486	0.12	+0.1
510,993	-		EFB2_00486	0.12	-0.4
510,993	-		EFB2_00486	0.12	+0.5
511,088	+		EFB2_00486	0.61	-0.5
511,088	+		EFB2_00486	0.61	+0.6
511,088	+		EFB2_00486	0.61	-1.1
511,088	+		EFB2_00486	0.61	+0.3
511,089	-		EFB2_00486	0.62	+0.0
511,089	-		EFB2_00486	0.62	-0.3
511,129	+		EFB2_00486	0.82	-0.1
511,129	+		EFB2_00486	0.82	+0.9
511,129	+		EFB2_00486	0.82	-0.8
511,129	+		EFB2_00486	0.82	-0.8
511,129	+		EFB2_00486	0.82	-0.5
511,129	+		EFB2_00486	0.82	-0.4
511,129	+		EFB2_00486	0.82	+0.6
511,130	-		EFB2_00486	0.83	-1.2
511,130	-		EFB2_00486	0.83	+0.1
511,148	+				+0.2
511,149	-				+0.9
511,161	+				-0.6
511,184	+				-0.3
511,184	+				+1.4
511,184	+				+0.2
511,184	+				-0.0
511,184	+				+0.6
511,184	+				+2.2
511,184	+				-0.9
511,184	+				+0.3
511,185	-				+0.8
511,185	-				+0.5
511,190	+				-2.0
511,200	+				-1.6
511,200	+				+0.6
511,200	+				+1.1
511,200	+				-1.0
511,200	+				+1.4
511,246	+				-0.5
511,246	+				-1.6
511,247	-				-0.9
511,249	+				-1.0
511,249	+				+1.0
511,249	+				+0.7
511,249	+				+1.1
511,249	+				+0.5
511,249	+				-1.1
511,249	+				-0.2
511,249	+				+0.8
511,250	-				-1.0
511,250	-				-0.6
511,250	-				+0.1
511,255	+				-0.0
511,256	-				-0.2
511,262	+				+3.1
511,262	+				+0.8
511,263	-				+1.9
511,263	-				+0.2
511,307	+		EFB2_00487	0.15	-0.3
511,307	+		EFB2_00487	0.15	+0.6
511,307	+		EFB2_00487	0.15	-0.4
511,308	-		EFB2_00487	0.15	+0.1
511,308	-		EFB2_00487	0.15	-0.7
511,308	-		EFB2_00487	0.15	+0.4
511,308	-		EFB2_00487	0.15	-0.4
511,331	-		EFB2_00487	0.20	+0.3
511,367	+		EFB2_00487	0.28	-1.8
511,368	-		EFB2_00487	0.28	+1.4
511,368	-		EFB2_00487	0.28	-4.1
511,368	-		EFB2_00487	0.28	-2.3
511,368	-		EFB2_00487	0.28	-2.6
511,368	-		EFB2_00487	0.28	-1.5
511,368	-		EFB2_00487	0.28	-0.0
511,368	-		EFB2_00487	0.28	-0.2
511,368	-		EFB2_00487	0.28	-0.5
511,406	+		EFB2_00487	0.36	+0.1
511,406	+		EFB2_00487	0.36	+0.2
511,406	+		EFB2_00487	0.36	-1.3
511,406	+		EFB2_00487	0.36	-0.5
511,406	+		EFB2_00487	0.36	-0.6
511,407	-		EFB2_00487	0.36	-0.8
511,407	-		EFB2_00487	0.36	-1.9
511,407	-		EFB2_00487	0.36	-0.2
511,407	-		EFB2_00487	0.36	-1.6
511,407	-		EFB2_00487	0.36	-1.5
511,408	+		EFB2_00487	0.36	-0.9
511,408	+		EFB2_00487	0.36	-1.9
511,408	+		EFB2_00487	0.36	-0.0
511,408	+		EFB2_00487	0.36	+0.5
511,408	+		EFB2_00487	0.36	-0.3
511,408	+		EFB2_00487	0.36	-1.6
511,408	+		EFB2_00487	0.36	-0.0
511,408	+		EFB2_00487	0.36	+1.0
511,408	+		EFB2_00487	0.36	+0.7
511,408	+		EFB2_00487	0.36	+0.7
511,408	+		EFB2_00487	0.36	-0.7
511,409	-		EFB2_00487	0.36	+0.2
511,409	-		EFB2_00487	0.36	+0.3
511,409	-		EFB2_00487	0.36	+1.5
511,409	-		EFB2_00487	0.36	+0.4
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