Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03113 and MPMX26_03114 are separated by 148 nucleotides MPMX26_03114 and MPMX26_03115 overlap by 8 nucleotides MPMX26_03115 and MPMX26_03116 are separated by 38 nucleotides
MPMX26_03113: MPMX26_03113 - hypothetical protein, at 26,453 to 26,749
_03113
MPMX26_03114: MPMX26_03114 - Transcriptional regulatory protein CusR, at 26,898 to 27,578
_03114
MPMX26_03115: MPMX26_03115 - Sensor histidine kinase CusS, at 27,571 to 28,971
_03115
MPMX26_03116: MPMX26_03116 - hypothetical protein, at 29,010 to 30,293
_03116
Position (kb) 27
28
29 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 26.711 kb on + strand, within MPMX26_03113 at 26.719 kb on - strand, within MPMX26_03113 at 26.951 kb on + strand at 26.991 kb on - strand, within MPMX26_03114 at 27.003 kb on + strand, within MPMX26_03114 at 27.242 kb on + strand, within MPMX26_03114 at 27.242 kb on + strand, within MPMX26_03114 at 27.252 kb on + strand, within MPMX26_03114 at 27.333 kb on + strand, within MPMX26_03114 at 27.340 kb on + strand, within MPMX26_03114 at 27.407 kb on + strand, within MPMX26_03114 at 27.543 kb on + strand at 27.810 kb on + strand, within MPMX26_03115 at 28.180 kb on + strand, within MPMX26_03115 at 28.519 kb on - strand, within MPMX26_03115 at 28.521 kb on + strand, within MPMX26_03115 at 28.616 kb on - strand, within MPMX26_03115 at 28.616 kb on - strand, within MPMX26_03115 at 28.616 kb on - strand, within MPMX26_03115 at 28.616 kb on - strand, within MPMX26_03115 at 28.627 kb on + strand, within MPMX26_03115 at 28.635 kb on - strand, within MPMX26_03115 at 28.635 kb on - strand, within MPMX26_03115 at 28.635 kb on - strand, within MPMX26_03115 at 28.635 kb on - strand, within MPMX26_03115 at 28.659 kb on - strand, within MPMX26_03115 at 28.659 kb on - strand, within MPMX26_03115 at 28.664 kb on - strand, within MPMX26_03115 at 28.771 kb on + strand, within MPMX26_03115 at 28.774 kb on + strand, within MPMX26_03115 at 28.784 kb on - strand, within MPMX26_03115 at 29.197 kb on - strand, within MPMX26_03116 at 29.205 kb on - strand, within MPMX26_03116 at 29.205 kb on - strand, within MPMX26_03116 at 29.442 kb on - strand, within MPMX26_03116 at 29.442 kb on - strand, within MPMX26_03116 at 29.597 kb on - strand, within MPMX26_03116 at 29.718 kb on - strand, within MPMX26_03116 at 29.785 kb on + strand, within MPMX26_03116 at 29.822 kb on + strand, within MPMX26_03116
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 26,711 + MPMX26_03113 0.87 +1.0 26,719 - MPMX26_03113 0.90 +0.8 26,951 + +0.1 26,991 - MPMX26_03114 0.14 +0.1 27,003 + MPMX26_03114 0.15 +1.7 27,242 + MPMX26_03114 0.51 +0.8 27,242 + MPMX26_03114 0.51 +1.2 27,252 + MPMX26_03114 0.52 +0.8 27,333 + MPMX26_03114 0.64 +0.5 27,340 + MPMX26_03114 0.65 +1.3 27,407 + MPMX26_03114 0.75 -0.0 27,543 + -0.1 27,810 + MPMX26_03115 0.17 +1.3 28,180 + MPMX26_03115 0.43 -0.5 28,519 - MPMX26_03115 0.68 +0.5 28,521 + MPMX26_03115 0.68 -0.4 28,616 - MPMX26_03115 0.75 +0.1 28,616 - MPMX26_03115 0.75 -1.2 28,616 - MPMX26_03115 0.75 -0.5 28,616 - MPMX26_03115 0.75 +1.3 28,627 + MPMX26_03115 0.75 +0.8 28,635 - MPMX26_03115 0.76 -0.7 28,635 - MPMX26_03115 0.76 +1.8 28,635 - MPMX26_03115 0.76 -0.3 28,635 - MPMX26_03115 0.76 +1.0 28,659 - MPMX26_03115 0.78 +2.2 28,659 - MPMX26_03115 0.78 +3.8 28,664 - MPMX26_03115 0.78 +0.7 28,771 + MPMX26_03115 0.86 +1.2 28,774 + MPMX26_03115 0.86 +0.5 28,784 - MPMX26_03115 0.87 -0.4 29,197 - MPMX26_03116 0.15 +1.2 29,205 - MPMX26_03116 0.15 +2.0 29,205 - MPMX26_03116 0.15 +1.8 29,442 - MPMX26_03116 0.34 +1.8 29,442 - MPMX26_03116 0.34 -1.5 29,597 - MPMX26_03116 0.46 +1.2 29,718 - MPMX26_03116 0.55 +0.6 29,785 + MPMX26_03116 0.60 +0.8 29,822 + MPMX26_03116 0.63 +1.2
Or see this region's nucleotide sequence