Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03057 and MPMX26_03058 are separated by 458 nucleotides MPMX26_03058 and MPMX26_03059 are separated by 15 nucleotides
MPMX26_03057: MPMX26_03057 - Sialic acid transporter NanT, at 3,180,335 to 3,181,612
_03057
MPMX26_03058: MPMX26_03058 - putative enoyl-CoA hydratase echA8, at 3,182,071 to 3,182,844
_03058
MPMX26_03059: MPMX26_03059 - 3-hydroxyadipyl-CoA dehydrogenase, at 3,182,860 to 3,184,377
_03059
Position (kb)
3182
3183 Strain fitness (log2 ratio)
-1
0
1
2 at 3181.162 kb on - strand, within MPMX26_03057 at 3181.222 kb on - strand, within MPMX26_03057 at 3181.307 kb on + strand, within MPMX26_03057 at 3181.307 kb on + strand, within MPMX26_03057 at 3181.307 kb on + strand, within MPMX26_03057 at 3181.404 kb on - strand, within MPMX26_03057 at 3181.480 kb on - strand, within MPMX26_03057 at 3181.556 kb on - strand at 3182.015 kb on + strand at 3182.163 kb on + strand, within MPMX26_03058 at 3182.163 kb on + strand, within MPMX26_03058 at 3182.163 kb on + strand, within MPMX26_03058 at 3182.171 kb on - strand, within MPMX26_03058 at 3182.229 kb on + strand, within MPMX26_03058 at 3182.250 kb on - strand, within MPMX26_03058 at 3182.280 kb on + strand, within MPMX26_03058 at 3182.286 kb on + strand, within MPMX26_03058 at 3182.296 kb on + strand, within MPMX26_03058 at 3182.310 kb on + strand, within MPMX26_03058 at 3182.312 kb on + strand, within MPMX26_03058 at 3182.322 kb on + strand, within MPMX26_03058 at 3182.348 kb on + strand, within MPMX26_03058 at 3182.379 kb on - strand, within MPMX26_03058 at 3182.389 kb on + strand, within MPMX26_03058 at 3182.538 kb on + strand, within MPMX26_03058 at 3182.688 kb on + strand, within MPMX26_03058 at 3182.688 kb on + strand, within MPMX26_03058 at 3182.688 kb on + strand, within MPMX26_03058 at 3182.696 kb on - strand, within MPMX26_03058 at 3182.734 kb on + strand, within MPMX26_03058 at 3182.734 kb on + strand, within MPMX26_03058 at 3182.742 kb on - strand, within MPMX26_03058 at 3182.899 kb on + strand at 3182.899 kb on + strand at 3182.948 kb on + strand at 3182.956 kb on - strand at 3182.958 kb on + strand at 3182.975 kb on + strand at 3183.075 kb on + strand, within MPMX26_03059 at 3183.102 kb on + strand, within MPMX26_03059 at 3183.260 kb on + strand, within MPMX26_03059 at 3183.265 kb on + strand, within MPMX26_03059 at 3183.268 kb on - strand, within MPMX26_03059 at 3183.270 kb on + strand, within MPMX26_03059 at 3183.270 kb on + strand, within MPMX26_03059 at 3183.270 kb on + strand, within MPMX26_03059 at 3183.270 kb on + strand, within MPMX26_03059 at 3183.273 kb on - strand, within MPMX26_03059 at 3183.288 kb on + strand, within MPMX26_03059 at 3183.293 kb on + strand, within MPMX26_03059 at 3183.293 kb on + strand, within MPMX26_03059 at 3183.293 kb on + strand, within MPMX26_03059 at 3183.296 kb on - strand, within MPMX26_03059 at 3183.301 kb on - strand, within MPMX26_03059 at 3183.301 kb on - strand, within MPMX26_03059 at 3183.301 kb on - strand, within MPMX26_03059 at 3183.325 kb on + strand, within MPMX26_03059 at 3183.406 kb on + strand, within MPMX26_03059 at 3183.406 kb on + strand, within MPMX26_03059 at 3183.406 kb on + strand, within MPMX26_03059 at 3183.442 kb on + strand, within MPMX26_03059 at 3183.462 kb on + strand, within MPMX26_03059 at 3183.462 kb on + strand, within MPMX26_03059 at 3183.462 kb on + strand, within MPMX26_03059 at 3183.467 kb on + strand, within MPMX26_03059 at 3183.470 kb on - strand, within MPMX26_03059 at 3183.580 kb on - strand, within MPMX26_03059 at 3183.711 kb on + strand, within MPMX26_03059 at 3183.771 kb on + strand, within MPMX26_03059 at 3183.781 kb on + strand, within MPMX26_03059 at 3183.808 kb on + strand, within MPMX26_03059 at 3183.830 kb on + strand, within MPMX26_03059 at 3183.840 kb on + strand, within MPMX26_03059 at 3183.840 kb on + strand, within MPMX26_03059 at 3183.843 kb on + strand, within MPMX26_03059
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 3,181,162 - MPMX26_03057 0.65 -0.0 3,181,222 - MPMX26_03057 0.69 -1.2 3,181,307 + MPMX26_03057 0.76 +1.0 3,181,307 + MPMX26_03057 0.76 -0.8 3,181,307 + MPMX26_03057 0.76 -0.7 3,181,404 - MPMX26_03057 0.84 -0.1 3,181,480 - MPMX26_03057 0.90 -0.0 3,181,556 - +0.6 3,182,015 + +0.8 3,182,163 + MPMX26_03058 0.12 -0.6 3,182,163 + MPMX26_03058 0.12 +0.8 3,182,163 + MPMX26_03058 0.12 -0.4 3,182,171 - MPMX26_03058 0.13 +2.4 3,182,229 + MPMX26_03058 0.20 -0.7 3,182,250 - MPMX26_03058 0.23 +0.5 3,182,280 + MPMX26_03058 0.27 +0.5 3,182,286 + MPMX26_03058 0.28 -0.4 3,182,296 + MPMX26_03058 0.29 -1.4 3,182,310 + MPMX26_03058 0.31 +0.8 3,182,312 + MPMX26_03058 0.31 +0.3 3,182,322 + MPMX26_03058 0.32 +0.3 3,182,348 + MPMX26_03058 0.36 +0.6 3,182,379 - MPMX26_03058 0.40 -1.2 3,182,389 + MPMX26_03058 0.41 +0.4 3,182,538 + MPMX26_03058 0.60 +0.8 3,182,688 + MPMX26_03058 0.80 +2.1 3,182,688 + MPMX26_03058 0.80 +1.6 3,182,688 + MPMX26_03058 0.80 -0.1 3,182,696 - MPMX26_03058 0.81 +1.8 3,182,734 + MPMX26_03058 0.86 +0.2 3,182,734 + MPMX26_03058 0.86 +1.1 3,182,742 - MPMX26_03058 0.87 +1.0 3,182,899 + +0.1 3,182,899 + -0.2 3,182,948 + +0.8 3,182,956 - +0.6 3,182,958 + -0.3 3,182,975 + +1.1 3,183,075 + MPMX26_03059 0.14 +0.9 3,183,102 + MPMX26_03059 0.16 -0.7 3,183,260 + MPMX26_03059 0.26 +1.8 3,183,265 + MPMX26_03059 0.27 -0.3 3,183,268 - MPMX26_03059 0.27 -0.9 3,183,270 + MPMX26_03059 0.27 +2.2 3,183,270 + MPMX26_03059 0.27 +0.6 3,183,270 + MPMX26_03059 0.27 +0.7 3,183,270 + MPMX26_03059 0.27 -0.7 3,183,273 - MPMX26_03059 0.27 -0.2 3,183,288 + MPMX26_03059 0.28 -1.7 3,183,293 + MPMX26_03059 0.29 -1.4 3,183,293 + MPMX26_03059 0.29 -0.0 3,183,293 + MPMX26_03059 0.29 +0.5 3,183,296 - MPMX26_03059 0.29 +0.3 3,183,301 - MPMX26_03059 0.29 +0.6 3,183,301 - MPMX26_03059 0.29 -0.0 3,183,301 - MPMX26_03059 0.29 +1.4 3,183,325 + MPMX26_03059 0.31 +1.0 3,183,406 + MPMX26_03059 0.36 +1.1 3,183,406 + MPMX26_03059 0.36 +0.8 3,183,406 + MPMX26_03059 0.36 -0.4 3,183,442 + MPMX26_03059 0.38 +0.6 3,183,462 + MPMX26_03059 0.40 -1.0 3,183,462 + MPMX26_03059 0.40 +0.5 3,183,462 + MPMX26_03059 0.40 +1.1 3,183,467 + MPMX26_03059 0.40 +0.8 3,183,470 - MPMX26_03059 0.40 -0.1 3,183,580 - MPMX26_03059 0.47 -1.3 3,183,711 + MPMX26_03059 0.56 -0.3 3,183,771 + MPMX26_03059 0.60 -1.2 3,183,781 + MPMX26_03059 0.61 -0.8 3,183,808 + MPMX26_03059 0.62 +0.3 3,183,830 + MPMX26_03059 0.64 -1.4 3,183,840 + MPMX26_03059 0.65 -0.7 3,183,840 + MPMX26_03059 0.65 +1.0 3,183,843 + MPMX26_03059 0.65 +1.6
Or see this region's nucleotide sequence