Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03041 and MPMX26_03042 are separated by 99 nucleotides MPMX26_03042 and MPMX26_03043 are separated by 75 nucleotides MPMX26_03043 and MPMX26_03044 are separated by 205 nucleotides MPMX26_03044 and MPMX26_03045 are separated by 451 nucleotides
MPMX26_03041: MPMX26_03041 - Peptidyl-prolyl cis-trans isomerase A, at 3,161,439 to 3,162,008
_03041
MPMX26_03042: MPMX26_03042 - hypothetical protein, at 3,162,108 to 3,162,773
_03042
MPMX26_03043: MPMX26_03043 - Carboxylesterase NlhH, at 3,162,849 to 3,163,919
_03043
MPMX26_03044: MPMX26_03044 - hypothetical protein, at 3,164,125 to 3,164,445
_03044
MPMX26_03045: MPMX26_03045 - hypothetical protein, at 3,164,897 to 3,165,181
_03045
Position (kb)
3162
3163
3164 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3161.854 kb on - strand, within MPMX26_03041 at 3161.948 kb on - strand, within MPMX26_03041 at 3161.951 kb on - strand, within MPMX26_03041 at 3161.951 kb on - strand, within MPMX26_03041 at 3161.951 kb on - strand, within MPMX26_03041 at 3162.123 kb on - strand at 3162.176 kb on - strand, within MPMX26_03042 at 3162.244 kb on + strand, within MPMX26_03042 at 3162.341 kb on + strand, within MPMX26_03042 at 3162.384 kb on + strand, within MPMX26_03042 at 3162.392 kb on + strand, within MPMX26_03042 at 3162.394 kb on + strand, within MPMX26_03042 at 3162.394 kb on + strand, within MPMX26_03042 at 3162.396 kb on + strand, within MPMX26_03042 at 3162.406 kb on + strand, within MPMX26_03042 at 3162.413 kb on + strand, within MPMX26_03042 at 3162.498 kb on + strand, within MPMX26_03042 at 3162.583 kb on + strand, within MPMX26_03042 at 3162.608 kb on + strand, within MPMX26_03042 at 3162.616 kb on - strand, within MPMX26_03042 at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.720 kb on + strand at 3162.721 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.725 kb on + strand at 3162.943 kb on + strand at 3162.951 kb on - strand at 3162.978 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3162.985 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043 at 3163.006 kb on - strand, within MPMX26_03043 at 3163.042 kb on - strand, within MPMX26_03043 at 3163.068 kb on - strand, within MPMX26_03043 at 3163.101 kb on - strand, within MPMX26_03043 at 3163.143 kb on - strand, within MPMX26_03043 at 3163.143 kb on - strand, within MPMX26_03043 at 3163.143 kb on - strand, within MPMX26_03043 at 3163.173 kb on - strand, within MPMX26_03043 at 3163.178 kb on - strand, within MPMX26_03043 at 3163.183 kb on - strand, within MPMX26_03043 at 3163.224 kb on - strand, within MPMX26_03043 at 3163.232 kb on - strand, within MPMX26_03043 at 3163.248 kb on - strand, within MPMX26_03043 at 3163.248 kb on - strand, within MPMX26_03043 at 3163.263 kb on - strand, within MPMX26_03043 at 3163.267 kb on + strand, within MPMX26_03043 at 3163.267 kb on + strand, within MPMX26_03043 at 3163.275 kb on - strand, within MPMX26_03043 at 3163.275 kb on - strand, within MPMX26_03043 at 3163.275 kb on - strand, within MPMX26_03043 at 3163.276 kb on + strand, within MPMX26_03043 at 3163.284 kb on - strand, within MPMX26_03043 at 3163.284 kb on - strand, within MPMX26_03043 at 3163.284 kb on - strand, within MPMX26_03043 at 3163.289 kb on - strand, within MPMX26_03043 at 3163.292 kb on + strand, within MPMX26_03043 at 3163.310 kb on - strand, within MPMX26_03043 at 3163.315 kb on + strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.323 kb on - strand, within MPMX26_03043 at 3163.328 kb on - strand, within MPMX26_03043 at 3163.328 kb on - strand, within MPMX26_03043 at 3163.328 kb on - strand, within MPMX26_03043 at 3163.359 kb on - strand, within MPMX26_03043 at 3163.359 kb on - strand, within MPMX26_03043 at 3163.515 kb on - strand, within MPMX26_03043 at 3163.515 kb on - strand, within MPMX26_03043 at 3163.515 kb on - strand, within MPMX26_03043 at 3163.629 kb on + strand, within MPMX26_03043 at 3163.632 kb on + strand, within MPMX26_03043 at 3163.639 kb on - strand, within MPMX26_03043 at 3163.640 kb on - strand, within MPMX26_03043 at 3163.715 kb on - strand, within MPMX26_03043 at 3163.715 kb on - strand, within MPMX26_03043 at 3163.737 kb on - strand, within MPMX26_03043 at 3163.737 kb on - strand, within MPMX26_03043 at 3163.806 kb on - strand, within MPMX26_03043 at 3163.811 kb on - strand, within MPMX26_03043 at 3163.812 kb on - strand, within MPMX26_03043 at 3163.870 kb on - strand at 3163.978 kb on + strand at 3163.994 kb on + strand at 3164.052 kb on + strand at 3164.115 kb on + strand at 3164.164 kb on + strand, within MPMX26_03044 at 3164.221 kb on + strand, within MPMX26_03044 at 3164.226 kb on + strand, within MPMX26_03044 at 3164.251 kb on + strand, within MPMX26_03044 at 3164.253 kb on + strand, within MPMX26_03044 at 3164.263 kb on + strand, within MPMX26_03044 at 3164.270 kb on + strand, within MPMX26_03044 at 3164.270 kb on + strand, within MPMX26_03044 at 3164.273 kb on + strand, within MPMX26_03044 at 3164.273 kb on + strand, within MPMX26_03044 at 3164.275 kb on + strand, within MPMX26_03044 at 3164.275 kb on + strand, within MPMX26_03044 at 3164.281 kb on - strand, within MPMX26_03044 at 3164.283 kb on + strand, within MPMX26_03044 at 3164.285 kb on + strand, within MPMX26_03044 at 3164.285 kb on + strand, within MPMX26_03044 at 3164.285 kb on + strand, within MPMX26_03044 at 3164.285 kb on + strand, within MPMX26_03044 at 3164.295 kb on + strand, within MPMX26_03044 at 3164.313 kb on + strand, within MPMX26_03044 at 3164.315 kb on + strand, within MPMX26_03044 at 3164.315 kb on + strand, within MPMX26_03044 at 3164.315 kb on + strand, within MPMX26_03044 at 3164.341 kb on + strand, within MPMX26_03044 at 3164.341 kb on + strand, within MPMX26_03044 at 3164.403 kb on + strand, within MPMX26_03044 at 3164.414 kb on + strand at 3164.462 kb on + strand at 3164.462 kb on + strand at 3164.462 kb on + strand at 3164.468 kb on + strand at 3164.470 kb on - strand at 3164.538 kb on - strand at 3164.877 kb on - strand at 3164.877 kb on - strand at 3164.877 kb on - strand at 3164.880 kb on - strand at 3164.882 kb on - strand at 3164.882 kb on - strand at 3164.896 kb on - strand at 3164.896 kb on - strand at 3164.896 kb on - strand at 3164.896 kb on - strand at 3164.910 kb on - strand at 3164.910 kb on - strand at 3164.912 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 3,161,854 - MPMX26_03041 0.73 +0.3 3,161,948 - MPMX26_03041 0.89 -0.0 3,161,951 - MPMX26_03041 0.90 -0.1 3,161,951 - MPMX26_03041 0.90 +0.2 3,161,951 - MPMX26_03041 0.90 -0.4 3,162,123 - -0.4 3,162,176 - MPMX26_03042 0.10 +0.8 3,162,244 + MPMX26_03042 0.20 +0.0 3,162,341 + MPMX26_03042 0.35 +0.1 3,162,384 + MPMX26_03042 0.41 +0.3 3,162,392 + MPMX26_03042 0.43 -0.8 3,162,394 + MPMX26_03042 0.43 +1.8 3,162,394 + MPMX26_03042 0.43 -0.7 3,162,396 + MPMX26_03042 0.43 +0.3 3,162,406 + MPMX26_03042 0.45 +0.5 3,162,413 + MPMX26_03042 0.46 +0.6 3,162,498 + MPMX26_03042 0.59 -0.6 3,162,583 + MPMX26_03042 0.71 +0.3 3,162,608 + MPMX26_03042 0.75 -0.7 3,162,616 - MPMX26_03042 0.76 -0.3 3,162,720 + -0.9 3,162,720 + -0.6 3,162,720 + -0.5 3,162,720 + +1.1 3,162,720 + -0.4 3,162,720 + +0.2 3,162,720 + +0.4 3,162,720 + +1.2 3,162,720 + -0.1 3,162,720 + +0.7 3,162,720 + -0.6 3,162,720 + +0.8 3,162,720 + -0.2 3,162,720 + -0.3 3,162,720 + -1.1 3,162,721 + -0.2 3,162,725 + -1.1 3,162,725 + +0.7 3,162,725 + +1.0 3,162,725 + +0.5 3,162,725 + -1.2 3,162,943 + -0.2 3,162,951 - -0.0 3,162,978 - MPMX26_03043 0.12 +0.0 3,162,985 - MPMX26_03043 0.13 -0.7 3,162,985 - MPMX26_03043 0.13 +0.2 3,162,985 - MPMX26_03043 0.13 +0.3 3,162,985 - MPMX26_03043 0.13 +0.5 3,163,006 - MPMX26_03043 0.15 -1.3 3,163,006 - MPMX26_03043 0.15 +1.7 3,163,006 - MPMX26_03043 0.15 -0.4 3,163,006 - MPMX26_03043 0.15 +1.5 3,163,042 - MPMX26_03043 0.18 +1.3 3,163,068 - MPMX26_03043 0.20 -0.9 3,163,101 - MPMX26_03043 0.24 +1.5 3,163,143 - MPMX26_03043 0.27 -0.1 3,163,143 - MPMX26_03043 0.27 +0.2 3,163,143 - MPMX26_03043 0.27 +2.1 3,163,173 - MPMX26_03043 0.30 -0.4 3,163,178 - MPMX26_03043 0.31 +1.3 3,163,183 - MPMX26_03043 0.31 +0.8 3,163,224 - MPMX26_03043 0.35 -0.2 3,163,232 - MPMX26_03043 0.36 +0.6 3,163,248 - MPMX26_03043 0.37 -1.3 3,163,248 - MPMX26_03043 0.37 +0.1 3,163,263 - MPMX26_03043 0.39 -0.2 3,163,267 + MPMX26_03043 0.39 +1.6 3,163,267 + MPMX26_03043 0.39 -0.2 3,163,275 - MPMX26_03043 0.40 -0.9 3,163,275 - MPMX26_03043 0.40 +1.1 3,163,275 - MPMX26_03043 0.40 +2.4 3,163,276 + MPMX26_03043 0.40 -0.4 3,163,284 - MPMX26_03043 0.41 -0.2 3,163,284 - MPMX26_03043 0.41 +0.5 3,163,284 - MPMX26_03043 0.41 +0.5 3,163,289 - MPMX26_03043 0.41 +0.0 3,163,292 + MPMX26_03043 0.41 +0.1 3,163,310 - MPMX26_03043 0.43 -0.4 3,163,315 + MPMX26_03043 0.44 +1.4 3,163,323 - MPMX26_03043 0.44 +1.1 3,163,323 - MPMX26_03043 0.44 +0.7 3,163,323 - MPMX26_03043 0.44 -0.1 3,163,323 - MPMX26_03043 0.44 +1.4 3,163,323 - MPMX26_03043 0.44 +2.3 3,163,323 - MPMX26_03043 0.44 +0.8 3,163,323 - MPMX26_03043 0.44 +3.0 3,163,323 - MPMX26_03043 0.44 -0.4 3,163,328 - MPMX26_03043 0.45 +0.6 3,163,328 - MPMX26_03043 0.45 +0.7 3,163,328 - MPMX26_03043 0.45 +0.6 3,163,359 - MPMX26_03043 0.48 -0.0 3,163,359 - MPMX26_03043 0.48 +0.3 3,163,515 - MPMX26_03043 0.62 -0.7 3,163,515 - MPMX26_03043 0.62 -0.7 3,163,515 - MPMX26_03043 0.62 +1.1 3,163,629 + MPMX26_03043 0.73 +0.3 3,163,632 + MPMX26_03043 0.73 -0.0 3,163,639 - MPMX26_03043 0.74 +0.4 3,163,640 - MPMX26_03043 0.74 +2.2 3,163,715 - MPMX26_03043 0.81 -0.3 3,163,715 - MPMX26_03043 0.81 +0.1 3,163,737 - MPMX26_03043 0.83 +0.3 3,163,737 - MPMX26_03043 0.83 +0.0 3,163,806 - MPMX26_03043 0.89 +1.8 3,163,811 - MPMX26_03043 0.90 +0.8 3,163,812 - MPMX26_03043 0.90 +0.8 3,163,870 - +2.7 3,163,978 + +0.8 3,163,994 + -0.5 3,164,052 + +1.5 3,164,115 + +0.6 3,164,164 + MPMX26_03044 0.12 +0.3 3,164,221 + MPMX26_03044 0.30 -0.6 3,164,226 + MPMX26_03044 0.31 -0.0 3,164,251 + MPMX26_03044 0.39 +0.2 3,164,253 + MPMX26_03044 0.40 +0.2 3,164,263 + MPMX26_03044 0.43 +0.3 3,164,270 + MPMX26_03044 0.45 +0.0 3,164,270 + MPMX26_03044 0.45 -0.5 3,164,273 + MPMX26_03044 0.46 +1.0 3,164,273 + MPMX26_03044 0.46 -0.1 3,164,275 + MPMX26_03044 0.47 -0.3 3,164,275 + MPMX26_03044 0.47 +0.0 3,164,281 - MPMX26_03044 0.49 +0.4 3,164,283 + MPMX26_03044 0.49 +1.2 3,164,285 + MPMX26_03044 0.50 -0.6 3,164,285 + MPMX26_03044 0.50 -1.6 3,164,285 + MPMX26_03044 0.50 +2.3 3,164,285 + MPMX26_03044 0.50 +0.8 3,164,295 + MPMX26_03044 0.53 -0.4 3,164,313 + MPMX26_03044 0.59 +0.3 3,164,315 + MPMX26_03044 0.59 -0.1 3,164,315 + MPMX26_03044 0.59 -0.2 3,164,315 + MPMX26_03044 0.59 -0.7 3,164,341 + MPMX26_03044 0.67 +0.8 3,164,341 + MPMX26_03044 0.67 +1.0 3,164,403 + MPMX26_03044 0.87 +0.4 3,164,414 + -0.7 3,164,462 + -1.2 3,164,462 + -0.3 3,164,462 + +1.8 3,164,468 + +0.3 3,164,470 - +1.8 3,164,538 - -0.4 3,164,877 - +2.4 3,164,877 - -0.7 3,164,877 - +1.4 3,164,880 - +1.5 3,164,882 - +0.4 3,164,882 - -0.3 3,164,896 - +0.4 3,164,896 - -1.6 3,164,896 - -0.4 3,164,896 - +0.3 3,164,910 - -0.2 3,164,910 - +0.2 3,164,912 - -0.3
Or see this region's nucleotide sequence