Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02809 and MPMX26_02810 are separated by 7 nucleotides MPMX26_02810 and MPMX26_02811 are separated by 18 nucleotides MPMX26_02811 and MPMX26_02812 are separated by 36 nucleotides
MPMX26_02809: MPMX26_02809 - hypothetical protein, at 2,895,614 to 2,896,477
_02809
MPMX26_02810: MPMX26_02810 - 3-dehydroquinate synthase, at 2,896,485 to 2,897,570
_02810
MPMX26_02811: MPMX26_02811 - Shikimate kinase 1, at 2,897,589 to 2,898,140
_02811
MPMX26_02812: MPMX26_02812 - Type 3 secretion system secretin, at 2,898,177 to 2,900,357
_02812
Position (kb)
2896
2897
2898 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2895.575 kb on - strand at 2895.595 kb on - strand at 2895.595 kb on - strand at 2895.595 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.656 kb on - strand at 2895.657 kb on - strand at 2895.657 kb on - strand at 2895.686 kb on - strand at 2895.724 kb on - strand, within MPMX26_02809 at 2895.737 kb on - strand, within MPMX26_02809 at 2895.737 kb on - strand, within MPMX26_02809 at 2895.737 kb on - strand, within MPMX26_02809 at 2895.737 kb on - strand, within MPMX26_02809 at 2895.737 kb on - strand, within MPMX26_02809 at 2895.737 kb on - strand, within MPMX26_02809 at 2895.737 kb on - strand, within MPMX26_02809 at 2895.745 kb on - strand, within MPMX26_02809 at 2895.745 kb on - strand, within MPMX26_02809 at 2895.796 kb on - strand, within MPMX26_02809 at 2895.801 kb on - strand, within MPMX26_02809 at 2895.801 kb on - strand, within MPMX26_02809 at 2895.805 kb on - strand, within MPMX26_02809 at 2895.806 kb on - strand, within MPMX26_02809 at 2895.889 kb on - strand, within MPMX26_02809 at 2895.904 kb on - strand, within MPMX26_02809 at 2895.959 kb on - strand, within MPMX26_02809 at 2895.965 kb on - strand, within MPMX26_02809 at 2895.977 kb on - strand, within MPMX26_02809 at 2896.009 kb on - strand, within MPMX26_02809 at 2896.018 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.028 kb on - strand, within MPMX26_02809 at 2896.040 kb on - strand, within MPMX26_02809 at 2896.045 kb on - strand, within MPMX26_02809 at 2896.054 kb on - strand, within MPMX26_02809 at 2896.054 kb on - strand, within MPMX26_02809 at 2896.054 kb on - strand, within MPMX26_02809 at 2896.059 kb on - strand, within MPMX26_02809 at 2896.059 kb on - strand, within MPMX26_02809 at 2896.059 kb on - strand, within MPMX26_02809 at 2896.071 kb on - strand, within MPMX26_02809 at 2896.208 kb on - strand, within MPMX26_02809 at 2896.232 kb on - strand, within MPMX26_02809 at 2896.242 kb on - strand, within MPMX26_02809 at 2896.266 kb on - strand, within MPMX26_02809 at 2896.319 kb on - strand, within MPMX26_02809 at 2896.385 kb on - strand, within MPMX26_02809 at 2896.410 kb on - strand at 2896.415 kb on - strand at 2896.415 kb on - strand at 2896.454 kb on - strand at 2896.481 kb on - strand at 2897.607 kb on - strand at 2897.607 kb on - strand at 2897.609 kb on - strand at 2897.609 kb on - strand at 2897.609 kb on - strand at 2897.609 kb on - strand at 2898.204 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.206 kb on - strand at 2898.208 kb on - strand at 2898.283 kb on - strand at 2898.284 kb on - strand at 2898.293 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.361 kb on - strand at 2898.378 kb on - strand at 2898.435 kb on - strand, within MPMX26_02812 at 2898.436 kb on - strand, within MPMX26_02812 at 2898.451 kb on - strand, within MPMX26_02812 at 2898.476 kb on - strand, within MPMX26_02812 at 2898.476 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.496 kb on - strand, within MPMX26_02812 at 2898.498 kb on - strand, within MPMX26_02812 at 2898.500 kb on - strand, within MPMX26_02812 at 2898.508 kb on - strand, within MPMX26_02812 at 2898.546 kb on - strand, within MPMX26_02812 at 2898.554 kb on - strand, within MPMX26_02812
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,895,575 - +0.3 2,895,595 - +0.4 2,895,595 - +0.6 2,895,595 - -2.0 2,895,656 - -0.7 2,895,656 - -0.6 2,895,656 - -0.3 2,895,656 - -0.1 2,895,656 - +0.7 2,895,656 - -0.1 2,895,656 - +0.8 2,895,656 - -1.0 2,895,656 - +0.3 2,895,656 - +0.2 2,895,656 - -0.8 2,895,656 - -0.4 2,895,656 - +0.6 2,895,656 - +0.2 2,895,656 - -0.2 2,895,657 - +0.5 2,895,657 - -0.0 2,895,686 - -0.7 2,895,724 - MPMX26_02809 0.13 +0.0 2,895,737 - MPMX26_02809 0.14 -0.6 2,895,737 - MPMX26_02809 0.14 -1.2 2,895,737 - MPMX26_02809 0.14 -0.7 2,895,737 - MPMX26_02809 0.14 -0.3 2,895,737 - MPMX26_02809 0.14 +0.4 2,895,737 - MPMX26_02809 0.14 -0.7 2,895,737 - MPMX26_02809 0.14 +0.0 2,895,745 - MPMX26_02809 0.15 +0.4 2,895,745 - MPMX26_02809 0.15 +0.2 2,895,796 - MPMX26_02809 0.21 +0.0 2,895,801 - MPMX26_02809 0.22 -0.1 2,895,801 - MPMX26_02809 0.22 -0.0 2,895,805 - MPMX26_02809 0.22 -0.3 2,895,806 - MPMX26_02809 0.22 -1.0 2,895,889 - MPMX26_02809 0.32 +0.0 2,895,904 - MPMX26_02809 0.34 +0.1 2,895,959 - MPMX26_02809 0.40 -0.3 2,895,965 - MPMX26_02809 0.41 +0.6 2,895,977 - MPMX26_02809 0.42 -0.0 2,896,009 - MPMX26_02809 0.46 -0.2 2,896,018 - MPMX26_02809 0.47 +1.9 2,896,028 - MPMX26_02809 0.48 -0.1 2,896,028 - MPMX26_02809 0.48 -0.4 2,896,028 - MPMX26_02809 0.48 -0.1 2,896,028 - MPMX26_02809 0.48 -1.9 2,896,028 - MPMX26_02809 0.48 -0.5 2,896,028 - MPMX26_02809 0.48 +0.2 2,896,028 - MPMX26_02809 0.48 -0.6 2,896,028 - MPMX26_02809 0.48 -1.1 2,896,028 - MPMX26_02809 0.48 -0.2 2,896,028 - MPMX26_02809 0.48 -0.4 2,896,028 - MPMX26_02809 0.48 -0.7 2,896,028 - MPMX26_02809 0.48 -0.9 2,896,028 - MPMX26_02809 0.48 +0.1 2,896,028 - MPMX26_02809 0.48 -0.3 2,896,028 - MPMX26_02809 0.48 -0.3 2,896,028 - MPMX26_02809 0.48 -1.9 2,896,028 - MPMX26_02809 0.48 +0.5 2,896,028 - MPMX26_02809 0.48 +0.2 2,896,028 - MPMX26_02809 0.48 +0.7 2,896,028 - MPMX26_02809 0.48 -0.4 2,896,028 - MPMX26_02809 0.48 -0.1 2,896,028 - MPMX26_02809 0.48 -0.3 2,896,028 - MPMX26_02809 0.48 -0.1 2,896,028 - MPMX26_02809 0.48 -0.1 2,896,028 - MPMX26_02809 0.48 -0.3 2,896,028 - MPMX26_02809 0.48 -0.7 2,896,028 - MPMX26_02809 0.48 -0.2 2,896,028 - MPMX26_02809 0.48 -0.9 2,896,028 - MPMX26_02809 0.48 -0.6 2,896,040 - MPMX26_02809 0.49 +0.4 2,896,045 - MPMX26_02809 0.50 +0.8 2,896,054 - MPMX26_02809 0.51 -0.4 2,896,054 - MPMX26_02809 0.51 +0.2 2,896,054 - MPMX26_02809 0.51 -0.5 2,896,059 - MPMX26_02809 0.52 -0.7 2,896,059 - MPMX26_02809 0.52 -0.8 2,896,059 - MPMX26_02809 0.52 -1.3 2,896,071 - MPMX26_02809 0.53 +0.4 2,896,208 - MPMX26_02809 0.69 +0.3 2,896,232 - MPMX26_02809 0.72 +0.9 2,896,242 - MPMX26_02809 0.73 -0.1 2,896,266 - MPMX26_02809 0.75 -0.5 2,896,319 - MPMX26_02809 0.82 -0.2 2,896,385 - MPMX26_02809 0.89 +0.5 2,896,410 - -0.6 2,896,415 - +0.1 2,896,415 - -0.8 2,896,454 - -0.6 2,896,481 - +0.1 2,897,607 - -0.7 2,897,607 - -2.1 2,897,609 - -0.8 2,897,609 - -0.8 2,897,609 - -0.3 2,897,609 - -2.0 2,898,204 - -0.2 2,898,206 - -0.1 2,898,206 - +0.3 2,898,206 - +0.4 2,898,206 - +0.3 2,898,206 - -0.2 2,898,206 - +0.1 2,898,206 - -0.1 2,898,208 - -0.1 2,898,283 - +0.1 2,898,284 - -0.7 2,898,293 - +0.1 2,898,361 - -0.2 2,898,361 - -0.2 2,898,361 - -0.9 2,898,361 - +0.0 2,898,361 - +0.2 2,898,378 - -0.3 2,898,435 - MPMX26_02812 0.12 +0.2 2,898,436 - MPMX26_02812 0.12 +0.4 2,898,451 - MPMX26_02812 0.13 +0.4 2,898,476 - MPMX26_02812 0.14 -0.2 2,898,476 - MPMX26_02812 0.14 -0.0 2,898,496 - MPMX26_02812 0.15 +0.6 2,898,496 - MPMX26_02812 0.15 +2.4 2,898,496 - MPMX26_02812 0.15 -0.0 2,898,496 - MPMX26_02812 0.15 -0.1 2,898,496 - MPMX26_02812 0.15 +0.3 2,898,496 - MPMX26_02812 0.15 +0.4 2,898,496 - MPMX26_02812 0.15 -0.2 2,898,496 - MPMX26_02812 0.15 -0.1 2,898,496 - MPMX26_02812 0.15 -0.1 2,898,496 - MPMX26_02812 0.15 +0.5 2,898,498 - MPMX26_02812 0.15 +0.1 2,898,500 - MPMX26_02812 0.15 -0.4 2,898,508 - MPMX26_02812 0.15 -0.7 2,898,546 - MPMX26_02812 0.17 +0.3 2,898,554 - MPMX26_02812 0.17 +0.1
Or see this region's nucleotide sequence