Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02011

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02009 and MPMX26_02010 are separated by 183 nucleotidesMPMX26_02010 and MPMX26_02011 are separated by 34 nucleotidesMPMX26_02011 and MPMX26_02012 are separated by 45 nucleotidesMPMX26_02012 and MPMX26_02013 are separated by 310 nucleotides MPMX26_02009: MPMX26_02009 - Alkyl hydroperoxide reductase C, at 2,075,262 to 2,075,825 _02009 MPMX26_02010: MPMX26_02010 - hypothetical protein, at 2,076,009 to 2,076,215 _02010 MPMX26_02011: MPMX26_02011 - tRNA 5-hydroxyuridine methyltransferase, at 2,076,250 to 2,076,834 _02011 MPMX26_02012: MPMX26_02012 - hypothetical protein, at 2,076,880 to 2,077,095 _02012 MPMX26_02013: MPMX26_02013 - Alkyl hydroperoxide reductase subunit F, at 2,077,406 to 2,078,971 _02013 Position (kb) 2076 2077Strain fitness (log2 ratio) -3 -2 -1 0 1at 2075.291 kb on + strandat 2075.338 kb on + strand, within MPMX26_02009at 2075.352 kb on + strand, within MPMX26_02009at 2075.359 kb on + strand, within MPMX26_02009at 2075.364 kb on + strand, within MPMX26_02009at 2075.364 kb on + strand, within MPMX26_02009at 2075.364 kb on + strand, within MPMX26_02009at 2075.377 kb on + strand, within MPMX26_02009at 2075.429 kb on + strand, within MPMX26_02009at 2075.429 kb on + strand, within MPMX26_02009at 2075.431 kb on + strand, within MPMX26_02009at 2075.448 kb on + strand, within MPMX26_02009at 2075.448 kb on + strand, within MPMX26_02009at 2075.450 kb on + strand, within MPMX26_02009at 2075.515 kb on + strand, within MPMX26_02009at 2075.589 kb on + strand, within MPMX26_02009at 2075.589 kb on + strand, within MPMX26_02009at 2075.610 kb on + strand, within MPMX26_02009at 2075.647 kb on + strand, within MPMX26_02009at 2075.647 kb on + strand, within MPMX26_02009at 2075.661 kb on + strand, within MPMX26_02009at 2075.661 kb on + strand, within MPMX26_02009at 2075.686 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.714 kb on + strand, within MPMX26_02009at 2075.738 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.788 kb on + strandat 2075.835 kb on + strandat 2076.271 kb on - strandat 2076.471 kb on + strand, within MPMX26_02011at 2076.928 kb on - strand, within MPMX26_02012at 2076.987 kb on - strand, within MPMX26_02012at 2077.069 kb on - strand, within MPMX26_02012at 2077.069 kb on - strand, within MPMX26_02012at 2077.603 kb on + strand, within MPMX26_02013at 2077.834 kb on + strand, within MPMX26_02013at 2077.834 kb on + strand, within MPMX26_02013at 2077.834 kb on + strand, within MPMX26_02013

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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2,075,291 + -0.3
2,075,338 + MPMX26_02009 0.13 -0.4
2,075,352 + MPMX26_02009 0.16 -0.1
2,075,359 + MPMX26_02009 0.17 -0.1
2,075,364 + MPMX26_02009 0.18 -0.5
2,075,364 + MPMX26_02009 0.18 -0.3
2,075,364 + MPMX26_02009 0.18 +0.2
2,075,377 + MPMX26_02009 0.20 +0.1
2,075,429 + MPMX26_02009 0.30 -0.2
2,075,429 + MPMX26_02009 0.30 -0.2
2,075,431 + MPMX26_02009 0.30 -0.3
2,075,448 + MPMX26_02009 0.33 +0.0
2,075,448 + MPMX26_02009 0.33 +0.4
2,075,450 + MPMX26_02009 0.33 -0.3
2,075,515 + MPMX26_02009 0.45 -0.1
2,075,589 + MPMX26_02009 0.58 -0.7
2,075,589 + MPMX26_02009 0.58 -0.0
2,075,610 + MPMX26_02009 0.62 +0.2
2,075,647 + MPMX26_02009 0.68 -0.4
2,075,647 + MPMX26_02009 0.68 +0.1
2,075,661 + MPMX26_02009 0.71 -0.4
2,075,661 + MPMX26_02009 0.71 -2.3
2,075,686 + MPMX26_02009 0.75 -0.7
2,075,695 + MPMX26_02009 0.77 +1.0
2,075,695 + MPMX26_02009 0.77 -0.4
2,075,695 + MPMX26_02009 0.77 +0.3
2,075,695 + MPMX26_02009 0.77 -0.7
2,075,695 + MPMX26_02009 0.77 +0.5
2,075,695 + MPMX26_02009 0.77 -3.1
2,075,714 + MPMX26_02009 0.80 -0.1
2,075,738 + MPMX26_02009 0.84 -0.1
2,075,748 + MPMX26_02009 0.86 -0.9
2,075,748 + MPMX26_02009 0.86 +0.0
2,075,748 + MPMX26_02009 0.86 -0.5
2,075,748 + MPMX26_02009 0.86 -0.2
2,075,748 + MPMX26_02009 0.86 -0.5
2,075,788 + +0.2
2,075,835 + -0.1
2,076,271 - -0.6
2,076,471 + MPMX26_02011 0.38 -1.5
2,076,928 - MPMX26_02012 0.22 +0.5
2,076,987 - MPMX26_02012 0.50 -0.6
2,077,069 - MPMX26_02012 0.88 +0.2
2,077,069 - MPMX26_02012 0.88 -0.4
2,077,603 + MPMX26_02013 0.13 +0.9
2,077,834 + MPMX26_02013 0.27 +0.9
2,077,834 + MPMX26_02013 0.27 +1.2
2,077,834 + MPMX26_02013 0.27 +0.4

Or see this region's nucleotide sequence