Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01875

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01874 and MPMX26_01875 are separated by 884 nucleotidesMPMX26_01875 and MPMX26_01876 are separated by 19 nucleotidesMPMX26_01876 and MPMX26_01877 overlap by 8 nucleotides MPMX26_01874: MPMX26_01874 - D-methionine transport system permease protein MetI, at 1,912,858 to 1,913,553 _01874 MPMX26_01875: MPMX26_01875 - DNA polymerase III subunit alpha, at 1,914,438 to 1,918,004 _01875 MPMX26_01876: MPMX26_01876 - tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ, at 1,918,024 to 1,918,866 _01876 MPMX26_01877: MPMX26_01877 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, at 1,918,859 to 1,919,677 _01877 Position (kb) 1914 1915 1916 1917 1918 1919Strain fitness (log2 ratio) -2 -1 0 1 2at 1913.528 kb on + strandat 1913.533 kb on + strandat 1917.881 kb on + strandat 1917.881 kb on + strandat 1917.891 kb on + strandat 1917.899 kb on + strandat 1917.920 kb on + strandat 1917.920 kb on + strandat 1917.945 kb on + strandat 1917.946 kb on + strandat 1917.964 kb on + strandat 1918.057 kb on + strandat 1918.086 kb on + strandat 1918.088 kb on + strandat 1918.091 kb on + strandat 1918.105 kb on + strandat 1918.111 kb on + strand, within MPMX26_01876at 1918.117 kb on + strand, within MPMX26_01876at 1918.136 kb on + strand, within MPMX26_01876at 1918.183 kb on + strand, within MPMX26_01876at 1918.203 kb on + strand, within MPMX26_01876at 1918.203 kb on + strand, within MPMX26_01876at 1918.208 kb on + strand, within MPMX26_01876at 1918.223 kb on + strand, within MPMX26_01876at 1918.233 kb on + strand, within MPMX26_01876at 1918.233 kb on + strand, within MPMX26_01876at 1918.233 kb on + strand, within MPMX26_01876at 1918.250 kb on + strand, within MPMX26_01876at 1918.264 kb on + strand, within MPMX26_01876at 1918.264 kb on + strand, within MPMX26_01876at 1918.302 kb on + strand, within MPMX26_01876at 1918.324 kb on + strand, within MPMX26_01876at 1918.324 kb on + strand, within MPMX26_01876at 1918.324 kb on + strand, within MPMX26_01876at 1918.345 kb on + strand, within MPMX26_01876at 1918.345 kb on + strand, within MPMX26_01876at 1918.352 kb on + strand, within MPMX26_01876at 1918.396 kb on + strand, within MPMX26_01876at 1918.396 kb on + strand, within MPMX26_01876at 1918.396 kb on + strand, within MPMX26_01876at 1918.396 kb on + strand, within MPMX26_01876at 1918.396 kb on + strand, within MPMX26_01876at 1918.396 kb on + strand, within MPMX26_01876at 1918.396 kb on + strand, within MPMX26_01876at 1918.412 kb on + strand, within MPMX26_01876at 1918.412 kb on + strand, within MPMX26_01876at 1918.417 kb on + strand, within MPMX26_01876at 1918.422 kb on + strand, within MPMX26_01876at 1918.433 kb on + strand, within MPMX26_01876at 1918.462 kb on + strand, within MPMX26_01876at 1918.467 kb on + strand, within MPMX26_01876at 1918.467 kb on + strand, within MPMX26_01876at 1918.488 kb on + strand, within MPMX26_01876at 1918.493 kb on + strand, within MPMX26_01876at 1918.530 kb on + strand, within MPMX26_01876at 1918.535 kb on + strand, within MPMX26_01876at 1918.535 kb on + strand, within MPMX26_01876at 1918.541 kb on + strand, within MPMX26_01876at 1918.549 kb on + strand, within MPMX26_01876at 1918.551 kb on + strand, within MPMX26_01876at 1918.551 kb on + strand, within MPMX26_01876at 1918.599 kb on + strand, within MPMX26_01876at 1918.599 kb on + strand, within MPMX26_01876at 1918.599 kb on + strand, within MPMX26_01876at 1918.599 kb on + strand, within MPMX26_01876at 1918.603 kb on + strand, within MPMX26_01876at 1918.608 kb on + strand, within MPMX26_01876at 1918.613 kb on + strand, within MPMX26_01876at 1918.613 kb on + strand, within MPMX26_01876at 1918.613 kb on + strand, within MPMX26_01876at 1918.626 kb on + strand, within MPMX26_01876at 1918.650 kb on + strand, within MPMX26_01876at 1918.650 kb on + strand, within MPMX26_01876at 1918.650 kb on + strand, within MPMX26_01876at 1918.650 kb on + strand, within MPMX26_01876at 1918.650 kb on + strand, within MPMX26_01876at 1918.713 kb on + strand, within MPMX26_01876at 1918.713 kb on + strand, within MPMX26_01876at 1918.745 kb on + strand, within MPMX26_01876at 1918.753 kb on + strand, within MPMX26_01876at 1918.800 kb on + strandat 1918.807 kb on + strandat 1918.807 kb on + strandat 1918.812 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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1,913,528 + +1.7
1,913,533 + -0.1
1,917,881 + +0.4
1,917,881 + +0.4
1,917,891 + +0.3
1,917,899 + -0.0
1,917,920 + -0.2
1,917,920 + +0.2
1,917,945 + -1.0
1,917,946 + +0.6
1,917,964 + -0.1
1,918,057 + -0.3
1,918,086 + -0.4
1,918,088 + -0.5
1,918,091 + -0.3
1,918,105 + -0.5
1,918,111 + MPMX26_01876 0.10 -1.8
1,918,117 + MPMX26_01876 0.11 +0.7
1,918,136 + MPMX26_01876 0.13 -0.2
1,918,183 + MPMX26_01876 0.19 +0.5
1,918,203 + MPMX26_01876 0.21 +0.2
1,918,203 + MPMX26_01876 0.21 -0.9
1,918,208 + MPMX26_01876 0.22 -0.5
1,918,223 + MPMX26_01876 0.24 -0.6
1,918,233 + MPMX26_01876 0.25 +0.5
1,918,233 + MPMX26_01876 0.25 -0.3
1,918,233 + MPMX26_01876 0.25 +0.5
1,918,250 + MPMX26_01876 0.27 -0.0
1,918,264 + MPMX26_01876 0.28 -0.5
1,918,264 + MPMX26_01876 0.28 +0.2
1,918,302 + MPMX26_01876 0.33 -1.1
1,918,324 + MPMX26_01876 0.36 -1.0
1,918,324 + MPMX26_01876 0.36 -0.7
1,918,324 + MPMX26_01876 0.36 -0.0
1,918,345 + MPMX26_01876 0.38 +0.3
1,918,345 + MPMX26_01876 0.38 +0.0
1,918,352 + MPMX26_01876 0.39 +1.3
1,918,396 + MPMX26_01876 0.44 -0.0
1,918,396 + MPMX26_01876 0.44 +0.6
1,918,396 + MPMX26_01876 0.44 +0.3
1,918,396 + MPMX26_01876 0.44 -0.7
1,918,396 + MPMX26_01876 0.44 +2.5
1,918,396 + MPMX26_01876 0.44 +0.3
1,918,396 + MPMX26_01876 0.44 -1.7
1,918,412 + MPMX26_01876 0.46 +0.5
1,918,412 + MPMX26_01876 0.46 +0.2
1,918,417 + MPMX26_01876 0.47 +0.8
1,918,422 + MPMX26_01876 0.47 +0.7
1,918,433 + MPMX26_01876 0.49 -0.6
1,918,462 + MPMX26_01876 0.52 -0.2
1,918,467 + MPMX26_01876 0.53 -1.9
1,918,467 + MPMX26_01876 0.53 +0.7
1,918,488 + MPMX26_01876 0.55 +0.4
1,918,493 + MPMX26_01876 0.56 +0.3
1,918,530 + MPMX26_01876 0.60 -0.8
1,918,535 + MPMX26_01876 0.61 +0.8
1,918,535 + MPMX26_01876 0.61 +0.7
1,918,541 + MPMX26_01876 0.61 -0.6
1,918,549 + MPMX26_01876 0.62 +0.1
1,918,551 + MPMX26_01876 0.63 +0.0
1,918,551 + MPMX26_01876 0.63 +0.2
1,918,599 + MPMX26_01876 0.68 +0.3
1,918,599 + MPMX26_01876 0.68 -0.3
1,918,599 + MPMX26_01876 0.68 -0.1
1,918,599 + MPMX26_01876 0.68 -0.7
1,918,603 + MPMX26_01876 0.69 -0.9
1,918,608 + MPMX26_01876 0.69 -0.4
1,918,613 + MPMX26_01876 0.70 +0.1
1,918,613 + MPMX26_01876 0.70 +0.9
1,918,613 + MPMX26_01876 0.70 +0.7
1,918,626 + MPMX26_01876 0.71 +0.9
1,918,650 + MPMX26_01876 0.74 +1.5
1,918,650 + MPMX26_01876 0.74 +0.0
1,918,650 + MPMX26_01876 0.74 -0.7
1,918,650 + MPMX26_01876 0.74 -0.4
1,918,650 + MPMX26_01876 0.74 -0.6
1,918,713 + MPMX26_01876 0.82 +0.2
1,918,713 + MPMX26_01876 0.82 -0.2
1,918,745 + MPMX26_01876 0.86 +0.6
1,918,753 + MPMX26_01876 0.86 +0.1
1,918,800 + -0.3
1,918,807 + +0.1
1,918,807 + -0.3
1,918,812 + -0.4

Or see this region's nucleotide sequence