Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01219

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01217 and MPMX26_01218 are separated by 14 nucleotidesMPMX26_01218 and MPMX26_01219 overlap by 1 nucleotidesMPMX26_01219 and MPMX26_01220 are separated by 3 nucleotides MPMX26_01217: MPMX26_01217 - Biopolymer transport protein ExbB, at 1,292,546 to 1,293,178 _01217 MPMX26_01218: MPMX26_01218 - Tol-Pal system protein TolR, at 1,293,193 to 1,293,615 _01218 MPMX26_01219: MPMX26_01219 - Lipid A export ATP-binding/permease protein MsbA, at 1,293,615 to 1,295,342 _01219 MPMX26_01220: MPMX26_01220 - Tetraacyldisaccharide 4'-kinase, at 1,295,346 to 1,296,356 _01220 Position (kb) 1293 1294 1295 1296Strain fitness (log2 ratio) -2 -1 0 1at 1292.632 kb on + strand, within MPMX26_01217at 1292.632 kb on + strand, within MPMX26_01217at 1292.661 kb on + strand, within MPMX26_01217at 1292.664 kb on + strand, within MPMX26_01217at 1292.715 kb on + strand, within MPMX26_01217at 1292.726 kb on + strand, within MPMX26_01217at 1292.727 kb on + strand, within MPMX26_01217at 1292.727 kb on + strand, within MPMX26_01217at 1292.727 kb on + strand, within MPMX26_01217at 1292.740 kb on + strand, within MPMX26_01217at 1292.764 kb on + strand, within MPMX26_01217at 1292.771 kb on + strand, within MPMX26_01217at 1292.771 kb on + strand, within MPMX26_01217at 1292.771 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.810 kb on + strand, within MPMX26_01217at 1292.878 kb on + strand, within MPMX26_01217at 1292.881 kb on + strand, within MPMX26_01217at 1292.886 kb on + strand, within MPMX26_01217at 1292.906 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.911 kb on + strand, within MPMX26_01217at 1292.911 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.918 kb on + strand, within MPMX26_01217at 1292.918 kb on + strand, within MPMX26_01217at 1292.918 kb on + strand, within MPMX26_01217at 1292.923 kb on + strand, within MPMX26_01217at 1292.923 kb on + strand, within MPMX26_01217at 1292.957 kb on + strand, within MPMX26_01217at 1292.975 kb on + strand, within MPMX26_01217at 1293.087 kb on + strand, within MPMX26_01217at 1293.096 kb on + strand, within MPMX26_01217at 1293.128 kb on + strandat 1293.133 kb on + strandat 1293.311 kb on + strand, within MPMX26_01218at 1293.321 kb on + strand, within MPMX26_01218at 1293.931 kb on - strand, within MPMX26_01219at 1296.335 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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1,292,632 + MPMX26_01217 0.14 +0.0
1,292,632 + MPMX26_01217 0.14 +0.7
1,292,661 + MPMX26_01217 0.18 +1.2
1,292,664 + MPMX26_01217 0.19 +0.9
1,292,715 + MPMX26_01217 0.27 -0.1
1,292,726 + MPMX26_01217 0.28 +1.0
1,292,727 + MPMX26_01217 0.29 +1.3
1,292,727 + MPMX26_01217 0.29 +0.5
1,292,727 + MPMX26_01217 0.29 +1.5
1,292,740 + MPMX26_01217 0.31 +0.4
1,292,764 + MPMX26_01217 0.34 +0.3
1,292,771 + MPMX26_01217 0.36 -0.6
1,292,771 + MPMX26_01217 0.36 -1.1
1,292,771 + MPMX26_01217 0.36 -0.1
1,292,800 + MPMX26_01217 0.40 -0.4
1,292,800 + MPMX26_01217 0.40 -0.5
1,292,800 + MPMX26_01217 0.40 +0.8
1,292,800 + MPMX26_01217 0.40 +0.2
1,292,800 + MPMX26_01217 0.40 -1.3
1,292,810 + MPMX26_01217 0.42 +0.6
1,292,878 + MPMX26_01217 0.52 +0.0
1,292,881 + MPMX26_01217 0.53 -0.1
1,292,886 + MPMX26_01217 0.54 +0.2
1,292,906 + MPMX26_01217 0.57 -0.9
1,292,908 + MPMX26_01217 0.57 -0.1
1,292,908 + MPMX26_01217 0.57 -0.1
1,292,908 + MPMX26_01217 0.57 +0.1
1,292,908 + MPMX26_01217 0.57 +0.5
1,292,911 + MPMX26_01217 0.58 -0.2
1,292,911 + MPMX26_01217 0.58 +0.6
1,292,913 + MPMX26_01217 0.58 -0.8
1,292,913 + MPMX26_01217 0.58 +0.7
1,292,913 + MPMX26_01217 0.58 +1.1
1,292,913 + MPMX26_01217 0.58 +0.8
1,292,913 + MPMX26_01217 0.58 +0.7
1,292,918 + MPMX26_01217 0.59 +1.6
1,292,918 + MPMX26_01217 0.59 +0.4
1,292,918 + MPMX26_01217 0.59 +0.2
1,292,923 + MPMX26_01217 0.60 +0.4
1,292,923 + MPMX26_01217 0.60 -0.3
1,292,957 + MPMX26_01217 0.65 +0.1
1,292,975 + MPMX26_01217 0.68 +0.2
1,293,087 + MPMX26_01217 0.85 -0.3
1,293,096 + MPMX26_01217 0.87 -0.6
1,293,128 + +0.5
1,293,133 + -0.7
1,293,311 + MPMX26_01218 0.28 -1.0
1,293,321 + MPMX26_01218 0.30 +0.9
1,293,931 - MPMX26_01219 0.18 -1.9
1,296,335 + +0.7

Or see this region's nucleotide sequence