Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00959

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00958 and MPMX26_00959 are separated by 15 nucleotidesMPMX26_00959 and MPMX26_00960 are separated by 22 nucleotides MPMX26_00958: MPMX26_00958 - hypothetical protein, at 1,005,921 to 1,007,285 _00958 MPMX26_00959: MPMX26_00959 - hypothetical protein, at 1,007,301 to 1,008,404 _00959 MPMX26_00960: MPMX26_00960 - Protein ClpV1, at 1,008,427 to 1,011,114 _00960 Position (kb) 1007 1008 1009Strain fitness (log2 ratio) -1 0 1at 1006.343 kb on - strand, within MPMX26_00958at 1006.491 kb on - strand, within MPMX26_00958at 1006.491 kb on - strand, within MPMX26_00958at 1006.503 kb on - strand, within MPMX26_00958at 1006.520 kb on - strand, within MPMX26_00958at 1006.923 kb on - strand, within MPMX26_00958at 1006.925 kb on - strand, within MPMX26_00958at 1006.995 kb on - strand, within MPMX26_00958at 1007.085 kb on - strand, within MPMX26_00958at 1007.129 kb on - strand, within MPMX26_00958at 1007.129 kb on - strand, within MPMX26_00958at 1007.198 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.439 kb on - strand, within MPMX26_00959at 1007.556 kb on - strand, within MPMX26_00959at 1007.559 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.640 kb on - strand, within MPMX26_00959at 1007.646 kb on - strand, within MPMX26_00959at 1007.741 kb on - strand, within MPMX26_00959at 1007.741 kb on - strand, within MPMX26_00959at 1007.892 kb on - strand, within MPMX26_00959at 1007.901 kb on - strand, within MPMX26_00959at 1007.976 kb on - strand, within MPMX26_00959at 1008.006 kb on - strand, within MPMX26_00959at 1008.242 kb on - strand, within MPMX26_00959at 1008.882 kb on - strand, within MPMX26_00960at 1008.882 kb on - strand, within MPMX26_00960at 1008.906 kb on - strand, within MPMX26_00960at 1008.906 kb on - strand, within MPMX26_00960at 1008.906 kb on - strand, within MPMX26_00960at 1009.081 kb on - strand, within MPMX26_00960at 1009.164 kb on - strand, within MPMX26_00960at 1009.216 kb on - strand, within MPMX26_00960at 1009.216 kb on - strand, within MPMX26_00960at 1009.216 kb on - strand, within MPMX26_00960at 1009.218 kb on - strand, within MPMX26_00960at 1009.269 kb on - strand, within MPMX26_00960at 1009.355 kb on - strand, within MPMX26_00960at 1009.368 kb on - strand, within MPMX26_00960

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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1,006,343 - MPMX26_00958 0.31 +0.5
1,006,491 - MPMX26_00958 0.42 -0.8
1,006,491 - MPMX26_00958 0.42 -0.5
1,006,503 - MPMX26_00958 0.43 +0.3
1,006,520 - MPMX26_00958 0.44 -1.0
1,006,923 - MPMX26_00958 0.73 +0.9
1,006,925 - MPMX26_00958 0.74 +0.6
1,006,995 - MPMX26_00958 0.79 +1.1
1,007,085 - MPMX26_00958 0.85 -0.0
1,007,129 - MPMX26_00958 0.88 +0.4
1,007,129 - MPMX26_00958 0.88 +0.2
1,007,198 - -0.9
1,007,345 - +0.3
1,007,345 - +1.3
1,007,345 - +0.1
1,007,345 - +1.3
1,007,345 - +1.2
1,007,345 - -0.1
1,007,345 - +0.3
1,007,345 - +1.1
1,007,345 - -0.5
1,007,345 - +0.5
1,007,345 - -0.8
1,007,439 - MPMX26_00959 0.12 -0.3
1,007,556 - MPMX26_00959 0.23 +0.2
1,007,559 - MPMX26_00959 0.23 +0.7
1,007,630 - MPMX26_00959 0.30 -0.7
1,007,630 - MPMX26_00959 0.30 +0.6
1,007,630 - MPMX26_00959 0.30 +1.1
1,007,630 - MPMX26_00959 0.30 -0.4
1,007,640 - MPMX26_00959 0.31 +0.3
1,007,646 - MPMX26_00959 0.31 -0.2
1,007,741 - MPMX26_00959 0.40 -0.8
1,007,741 - MPMX26_00959 0.40 -0.3
1,007,892 - MPMX26_00959 0.54 +1.1
1,007,901 - MPMX26_00959 0.54 +0.3
1,007,976 - MPMX26_00959 0.61 +1.6
1,008,006 - MPMX26_00959 0.64 -0.5
1,008,242 - MPMX26_00959 0.85 -0.3
1,008,882 - MPMX26_00960 0.17 -0.5
1,008,882 - MPMX26_00960 0.17 +0.1
1,008,906 - MPMX26_00960 0.18 -0.4
1,008,906 - MPMX26_00960 0.18 -0.0
1,008,906 - MPMX26_00960 0.18 +1.5
1,009,081 - MPMX26_00960 0.24 +0.7
1,009,164 - MPMX26_00960 0.27 +0.6
1,009,216 - MPMX26_00960 0.29 +0.3
1,009,216 - MPMX26_00960 0.29 +1.2
1,009,216 - MPMX26_00960 0.29 -0.4
1,009,218 - MPMX26_00960 0.29 +0.8
1,009,269 - MPMX26_00960 0.31 -0.4
1,009,355 - MPMX26_00960 0.35 -1.0
1,009,368 - MPMX26_00960 0.35 +0.0

Or see this region's nucleotide sequence