Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF76

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
74,937	-				-1.7
75,149	+		GFF76	0.13	+0.5
75,284	+		GFF76	0.29	+0.1
75,296	+		GFF76	0.31	-0.3
75,296	+		GFF76	0.31	+0.1
75,297	-		GFF76	0.31	-0.1
75,569	+		GFF76	0.63	-0.1
75,569	+		GFF76	0.63	-1.1
75,572	+		GFF76	0.63	+0.3
75,573	-		GFF76	0.64	+0.4
75,662	+		GFF76	0.74	-0.7
75,810	-				+1.3
76,169	-		GFF77	0.13	+0.0
76,169	-		GFF77	0.13	+0.5
76,207	-		GFF77	0.15	+0.0
76,207	-		GFF77	0.15	-0.5
76,207	-		GFF77	0.15	+0.1
76,269	+		GFF77	0.19	+0.2
76,336	-		GFF77	0.23	+0.6
76,336	-		GFF77	0.23	+0.5
76,369	-		GFF77	0.25	+0.2